RNA–Protein interactions for RNA: ENST00000516336.1

RNU6-1225P-201, Transcript of RNA, U6 small nuclear 1225, pseudogene, humanhuman

BASIC

Gene RNU6-1225P, Length 65 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1225P-201ENST00000516336 PGRMC1O00264 195 aaKnown RBP0.48□□□□□ -2.33
RNU6-1225P-201ENST00000516336 BLCAPP62952 87 aa0.48□□□□□ -2.33
RNU6-1225P-201ENST00000516336 CCSMST1Q4G0I0 132 aa0.48□□□□□ -2.33
RNU6-1225P-201ENST00000516336 TMEM128Q5BJH2 165 aa0.48□□□□□ -2.33
RNU6-1225P-201ENST00000516336 SAMD13Q5VXD3 122 aa0.48□□□□□ -2.33
RNU6-1225P-201ENST00000516336 TOMM20LQ6UXN7 152 aa0.48□□□□□ -2.33
RNU6-1225P-201ENST00000516336 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.48□□□□□ -2.33
RNU6-1225P-201ENST00000516336 SMR3AQ99954 134 aa0.48□□□□□ -2.33
RNU6-1225P-201ENST00000516336 EDF1O60869 148 aaKnown RBP0.47□□□□□ -2.33
RNU6-1225P-201ENST00000516336 GTF2A1P52655 376 aaPredicted RBP0.47□□□□□ -2.33
RNU6-1225P-201ENST00000516336 C10orf99Q6UWK7 81 aa0.47□□□□□ -2.33
RNU6-1225P-201ENST00000516336 BRK1Q8WUW1 75 aa0.47□□□□□ -2.33
RNU6-1225P-201ENST00000516336 CCDC115Q96NT0 180 aa0.47□□□□□ -2.33
RNU6-1225P-201ENST00000516336 C19orf12Q9NSK7 152 aa0.47□□□□□ -2.33
RNU6-1225P-201ENST00000516336 ANKRD31Q8N7Z5 1873 aa0.47□□□□□ -2.33
RNU6-1225P-201ENST00000516336 A2MP01023 1474 aa0.47□□□□□ -2.33
RNU6-1225P-201ENST00000516336 IFITM5A6NNB3 132 aa0.46□□□□□ -2.34
RNU6-1225P-201ENST00000516336 LY6G6CO95867 125 aa0.46□□□□□ -2.34
RNU6-1225P-201ENST00000516336 HBDP02042 147 aa0.46□□□□□ -2.34
RNU6-1225P-201ENST00000516336 RPL22P35268 128 aaKnown RBP0.46□□□□□ -2.34
RNU6-1225P-201ENST00000516336 ETV6P41212 452 aa0.46□□□□□ -2.34
RNU6-1225P-201ENST00000516336 LSM3P62310 102 aaKnown RBP0.46□□□□□ -2.34
RNU6-1225P-201ENST00000516336 GLYATL3Q5SZD4 288 aa0.46□□□□□ -2.34
RNU6-1225P-201ENST00000516336 OR8J3Q8NGG0 315 aa0.46□□□□□ -2.34
RNU6-1225P-201ENST00000516336 NAT14Q8WUY8 206 aa0.46□□□□□ -2.34
RNU6-1225P-201ENST00000516336 LINC00208Q96KT6 92 aa0.46□□□□□ -2.34
RNU6-1225P-201ENST00000516336 SELENOSQ9BQE4 189 aa0.46□□□□□ -2.34
RNU6-1225P-201ENST00000516336 MRPL36Q9P0J6 103 aaKnown RBP0.46□□□□□ -2.34
RNU6-1225P-201ENST00000516336 COMMD3Q9UBI1 195 aa0.46□□□□□ -2.34
RNU6-1225P-201ENST00000516336 CTTNBP2Q8WZ74 1663 aa0.46□□□□□ -2.34
RNU6-1225P-201ENST00000516336 NUP210Q8TEM1 1887 aaPredicted RBP0.46□□□□□ -2.34
RNU6-1225P-201ENST00000516336 TMEM189A5PLL7 270 aa0.45□□□□□ -2.34
RNU6-1225P-201ENST00000516336 PRORSD1PA6NEY8 169 aa0.45□□□□□ -2.34
RNU6-1225P-201ENST00000516336 CDC42EP2O14613 210 aa0.45□□□□□ -2.34
RNU6-1225P-201ENST00000516336 EVI2AP22794 236 aa0.45□□□□□ -2.34
RNU6-1225P-201ENST00000516336 S100GP29377 79 aa0.45□□□□□ -2.34
RNU6-1225P-201ENST00000516336 SMIM15Q7Z3B0 74 aa0.45□□□□□ -2.34
RNU6-1225P-201ENST00000516336 TMEM35BQ8NCS4 154 aa0.45□□□□□ -2.34
RNU6-1225P-201ENST00000516336 OR5A2Q8NGI9 324 aa0.45□□□□□ -2.34
RNU6-1225P-201ENST00000516336 SMIM7Q9BQ49 75 aa0.45□□□□□ -2.34
RNU6-1225P-201ENST00000516336 DDA1Q9BW61 102 aa0.45□□□□□ -2.34
RNU6-1225P-201ENST00000516336 MRPL35Q9NZE8 188 aaKnown RBP0.45□□□□□ -2.34
RNU6-1225P-201ENST00000516336 USP54Q70EL1 1684 aa0.45□□□□□ -2.34
RNU6-1225P-201ENST00000516336 PBRM1Q86U86 1689 aa0.45□□□□□ -2.34
RNU6-1225P-201ENST00000516336 TMEM30CPA0ZSE6 113 aa0.44□□□□□ -2.34
RNU6-1225P-201ENST00000516336 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
RNU6-1225P-201ENST00000516336 IGF2P01344 180 aa0.44□□□□□ -2.34
RNU6-1225P-201ENST00000516336 KRTAP2-3P0C7H8 128 aa0.44□□□□□ -2.34
RNU6-1225P-201ENST00000516336 FXYD3Q14802 87 aa0.44□□□□□ -2.34
RNU6-1225P-201ENST00000516336 KRTAP2-4Q9BYR9 128 aa0.44□□□□□ -2.34
RNU6-1225P-201ENST00000516336 KRTAP2-1Q9BYU5 128 aa0.44□□□□□ -2.34
RNU6-1225P-201ENST00000516336 ZDBF2Q9HCK1 2354 aa0.43□□□□□ -2.34
RNU6-1225P-201ENST00000516336 NBDYA0A0U1RRE5 68 aa0.43□□□□□ -2.34
RNU6-1225P-201ENST00000516336 LOC101927531A0A1B0GV80 90 aa0.43□□□□□ -2.34
RNU6-1225P-201ENST00000516336 CKS2P33552 79 aa0.43□□□□□ -2.34
RNU6-1225P-201ENST00000516336 ZNF56Q15929 161 aa0.43□□□□□ -2.34
RNU6-1225P-201ENST00000516336 SPINK13Q1W4C9 94 aa0.43□□□□□ -2.34
RNU6-1225P-201ENST00000516336 LYPD5Q6UWN5 251 aa0.43□□□□□ -2.34
RNU6-1225P-201ENST00000516336 DEFB132Q7Z7B7 95 aa0.43□□□□□ -2.34
RNU6-1225P-201ENST00000516336 KCPQ6ZWJ8 1503 aa0.43□□□□□ -2.34
RNU6-1225P-201ENST00000516336 SPTBP11277 2137 aa0.43□□□□□ -2.34
RNU6-1225P-201ENST00000516336 HIGD1CA8MV81 97 aa0.42□□□□□ -2.34
RNU6-1225P-201ENST00000516336 UQCRQO14949 82 aa0.42□□□□□ -2.34
RNU6-1225P-201ENST00000516336 TPST1O60507 370 aa0.42□□□□□ -2.34
RNU6-1225P-201ENST00000516336 IGKCP01834 107 aa0.42□□□□□ -2.34
RNU6-1225P-201ENST00000516336 IL7P13232 177 aa0.42□□□□□ -2.34
RNU6-1225P-201ENST00000516336 RHOHQ15669 191 aa0.42□□□□□ -2.34
RNU6-1225P-201ENST00000516336 C5orf56Q8N8D9 126 aa0.42□□□□□ -2.34
RNU6-1225P-201ENST00000516336 OTOSQ8NHW6 89 aa0.42□□□□□ -2.34
RNU6-1225P-201ENST00000516336 KIAA1549LQ6ZVL6 1849 aa0.41□□□□□ -2.34
RNU6-1225P-201ENST00000516336 IGHV1-24A0A0C4DH33 117 aa0.41□□□□□ -2.34
RNU6-1225P-201ENST00000516336 SLC25A5P05141 298 aaKnown RBP0.41□□□□□ -2.34
RNU6-1225P-201ENST00000516336 IDO2Q6ZQW0 420 aa0.41□□□□□ -2.34
RNU6-1225P-201ENST00000516336 SKA2Q8WVK7 121 aaPredicted RBP0.41□□□□□ -2.34
RNU6-1225P-201ENST00000516336 NDUFAF1Q9Y375 327 aa0.41□□□□□ -2.34
RNU6-1225P-201ENST00000516336 NAV3Q8IVL0 2385 aa0.4□□□□□ -2.34
RNU6-1225P-201ENST00000516336 A0A0G2JMM0 328 aa0.4□□□□□ -2.35
RNU6-1225P-201ENST00000516336 TSTD3H0UI37 97 aa0.4□□□□□ -2.35
RNU6-1225P-201ENST00000516336 IQCJQ1A5X6 159 aa0.4□□□□□ -2.35
RNU6-1225P-201ENST00000516336 ASB16-AS1Q495Z4 193 aa0.4□□□□□ -2.35
RNU6-1225P-201ENST00000516336 TSKUQ8WUA8 353 aa0.4□□□□□ -2.35
RNU6-1225P-201ENST00000516336 DMAC1Q96GE9 116 aa0.4□□□□□ -2.35
RNU6-1225P-201ENST00000516336 MED23Q9ULK4 1368 aa0.4□□□□□ -2.35
RNU6-1225P-201ENST00000516336 FXYD1O00168 92 aa0.39□□□□□ -2.35
RNU6-1225P-201ENST00000516336 TCRAP04437 139 aa0.39□□□□□ -2.35
RNU6-1225P-201ENST00000516336 PCBD1P61457 104 aa0.39□□□□□ -2.35
RNU6-1225P-201ENST00000516336 RPL37P61927 97 aaKnown RBP0.39□□□□□ -2.35
RNU6-1225P-201ENST00000516336 TANC2Q9HCD6 1990 aa0.39□□□□□ -2.35
RNU6-1225P-201ENST00000516336 ASH1LQ9NR48 2969 aaKnown RBP0.39□□□□□ -2.35
RNU6-1225P-201ENST00000516336 H0YJX3 145 aa0.38□□□□□ -2.35
RNU6-1225P-201ENST00000516336 J3KT08 172 aa0.38□□□□□ -2.35
RNU6-1225P-201ENST00000516336 RPS28P62857 69 aaKnown RBP0.38□□□□□ -2.35
RNU6-1225P-201ENST00000516336 PSPHP78330 225 aa0.38□□□□□ -2.35
RNU6-1225P-201ENST00000516336 ATG5Q9H1Y0 275 aa0.38□□□□□ -2.35
RNU6-1225P-201ENST00000516336 OVOS2A0A0G2JMS6 1433 aa0.38□□□□□ -2.35
RNU6-1225P-201ENST00000516336 ANK1P16157 1881 aa0.37□□□□□ -2.35
RNU6-1225P-201ENST00000516336 LOC285556D6RIA3 1793 aa0.37□□□□□ -2.35
RNU6-1225P-201ENST00000516336 PNMA8CA0A1B0GUJ8 204 aa0.37□□□□□ -2.35
RNU6-1225P-201ENST00000516336 DPM2O94777 84 aa0.37□□□□□ -2.35
RNU6-1225P-201ENST00000516336 ADCYAP1P18509 176 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms