RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 CTXND1A0A1B0GTU2 59 aa10.44□□□□□ -0.74
HMGCLL1-209ENST00000515546 RBAKDNA6NC62 111 aa10.44□□□□□ -0.74
HMGCLL1-209ENST00000515546 J3KRW8 73 aa10.44□□□□□ -0.74
HMGCLL1-209ENST00000515546 ZNF324O75467 553 aaPredicted RBP10.44□□□□□ -0.74
HMGCLL1-209ENST00000515546 STAG3L2P0CL84 134 aa10.44□□□□□ -0.74
HMGCLL1-209ENST00000515546 STAG3L3P0CL85 134 aa10.44□□□□□ -0.74
HMGCLL1-209ENST00000515546 BTN1A1Q13410 526 aa10.44□□□□□ -0.74
HMGCLL1-209ENST00000515546 TMEM78Q5T7P6 136 aa10.44□□□□□ -0.74
HMGCLL1-209ENST00000515546 DPPA3Q6W0C5 159 aa10.44□□□□□ -0.74
HMGCLL1-209ENST00000515546 CCDC28AQ8IWP9 274 aa10.44□□□□□ -0.74
HMGCLL1-209ENST00000515546 Q9H3A6 140 aa10.44□□□□□ -0.74
HMGCLL1-209ENST00000515546 NOP10Q9NPE3 64 aaKnown RBP10.44□□□□□ -0.74
HMGCLL1-209ENST00000515546 DNAH17Q9UFH2 4485 aa10.43□□□□□ -0.74
HMGCLL1-209ENST00000515546 A0A1W2PPV4 95 aa10.43□□□□□ -0.74
HMGCLL1-209ENST00000515546 ATP5G1P05496 136 aa10.43□□□□□ -0.74
HMGCLL1-209ENST00000515546 ARL14EPLP0DKL9 152 aa10.43□□□□□ -0.74
HMGCLL1-209ENST00000515546 ATP5G3P48201 142 aa10.43□□□□□ -0.74
HMGCLL1-209ENST00000515546 RAB5CP51148 216 aa10.43□□□□□ -0.74
HMGCLL1-209ENST00000515546 RANP62826 216 aaKnown RBP10.43□□□□□ -0.74
HMGCLL1-209ENST00000515546 PRR9Q5T870 116 aa10.43□□□□□ -0.74
HMGCLL1-209ENST00000515546 ZNF492Q9P255 531 aa10.43□□□□□ -0.74
HMGCLL1-209ENST00000515546 MAP1LC3B2A6NCE7 125 aa10.42□□□□□ -0.74
HMGCLL1-209ENST00000515546 IFNA7P01567 189 aa10.42□□□□□ -0.74
HMGCLL1-209ENST00000515546 ZNF138P52744 262 aa10.42□□□□□ -0.74
HMGCLL1-209ENST00000515546 FGF8P55075 233 aaPredicted RBP10.42□□□□□ -0.74
HMGCLL1-209ENST00000515546 DAZ2Q13117 558 aaKnown RBP10.42□□□□□ -0.74
HMGCLL1-209ENST00000515546 PQLC2Q6ZP29 291 aa10.42□□□□□ -0.74
HMGCLL1-209ENST00000515546 C15orf53Q8NAA6 179 aa10.42□□□□□ -0.74
HMGCLL1-209ENST00000515546 C11orf72Q8NBR9 251 aa10.42□□□□□ -0.74
HMGCLL1-209ENST00000515546 Q8TAT8 98 aa10.42□□□□□ -0.74
HMGCLL1-209ENST00000515546 PCNPQ8WW12 178 aaKnown RBP10.42□□□□□ -0.74
HMGCLL1-209ENST00000515546 MBD3L1Q8WWY6 194 aa10.42□□□□□ -0.74
HMGCLL1-209ENST00000515546 MAP1LC3BQ9GZQ8 125 aa10.42□□□□□ -0.74
HMGCLL1-209ENST00000515546 F5H768 121 aa10.41□□□□□ -0.74
HMGCLL1-209ENST00000515546 RNASE4P34096 147 aaKnown RBP10.41□□□□□ -0.74
HMGCLL1-209ENST00000515546 CSN1S1P47710 185 aa10.41□□□□□ -0.74
HMGCLL1-209ENST00000515546 ANXA2RQ3ZCQ2 193 aa10.41□□□□□ -0.74
HMGCLL1-209ENST00000515546 RNF212Q495C1 297 aa10.41□□□□□ -0.74
HMGCLL1-209ENST00000515546 OTORQ9NRC9 128 aa10.41□□□□□ -0.74
HMGCLL1-209ENST00000515546 A0A1B0GV50 99 aa10.4□□□□□ -0.74
HMGCLL1-209ENST00000515546 SNURFLB1AK76 121 aa10.4□□□□□ -0.74
HMGCLL1-209ENST00000515546 DIRC3C9JPN6 131 aa10.4□□□□□ -0.74
HMGCLL1-209ENST00000515546 GPX1P07203 203 aa10.4□□□□□ -0.74
HMGCLL1-209ENST00000515546 H2AFB1P0C5Y9 115 aa10.4□□□□□ -0.74
HMGCLL1-209ENST00000515546 GCHFRP30047 84 aa10.4□□□□□ -0.74
HMGCLL1-209ENST00000515546 EIF4E3Q8N5X7 224 aaKnown RBP10.4□□□□□ -0.74
HMGCLL1-209ENST00000515546 RXFP4Q8TDU9 374 aa10.4□□□□□ -0.74
HMGCLL1-209ENST00000515546 SFT2D1Q8WV19 159 aa10.4□□□□□ -0.74
HMGCLL1-209ENST00000515546 TMPRSS5Q9H3S3 457 aa10.4□□□□□ -0.74
HMGCLL1-209ENST00000515546 TRAV1-1A0A0B4J248 108 aa10.39□□□□□ -0.75
HMGCLL1-209ENST00000515546 CCL20P78556 96 aa10.39□□□□□ -0.75
HMGCLL1-209ENST00000515546 ARL6IP6Q8N6S5 226 aa10.39□□□□□ -0.75
HMGCLL1-209ENST00000515546 SUN5Q8TC36 379 aa10.39□□□□□ -0.75
HMGCLL1-209ENST00000515546 C18orf15Q96N68 181 aa10.39□□□□□ -0.75
HMGCLL1-209ENST00000515546 LENEPQ9Y5L5 61 aa10.39□□□□□ -0.75
HMGCLL1-209ENST00000515546 CXorf1O96002 111 aa10.38□□□□□ -0.75
HMGCLL1-209ENST00000515546 FAM3BP58499 235 aaPredicted RBP10.38□□□□□ -0.75
HMGCLL1-209ENST00000515546 IBA57Q5T440 356 aaKnown RBP10.38□□□□□ -0.75
HMGCLL1-209ENST00000515546 Q6ZQT7 251 aa10.38□□□□□ -0.75
HMGCLL1-209ENST00000515546 Q6ZTI0 123 aa10.38□□□□□ -0.75
HMGCLL1-209ENST00000515546 UBE2DNLQ8IWF7 75 aa10.38□□□□□ -0.75
HMGCLL1-209ENST00000515546 LYPD6BQ8NI32 183 aa10.38□□□□□ -0.75
HMGCLL1-209ENST00000515546 GSN-AS1Q9NRJ2 163 aa10.38□□□□□ -0.75
HMGCLL1-209ENST00000515546 IGHV1OR15-1A0A075B7D0 117 aa10.37□□□□□ -0.75
HMGCLL1-209ENST00000515546 GAGE12BA1L429 117 aa10.37□□□□□ -0.75
HMGCLL1-209ENST00000515546 RGS13O14921 159 aa10.37□□□□□ -0.75
HMGCLL1-209ENST00000515546 GAGE7O76087 117 aa10.37□□□□□ -0.75
HMGCLL1-209ENST00000515546 GAGE12FP0CL80 117 aa10.37□□□□□ -0.75
HMGCLL1-209ENST00000515546 GAGE12GP0CL81 117 aa10.37□□□□□ -0.75
HMGCLL1-209ENST00000515546 GAGE12IP0CL82 117 aa10.37□□□□□ -0.75
HMGCLL1-209ENST00000515546 HOXA5P20719 270 aa10.37□□□□□ -0.75
HMGCLL1-209ENST00000515546 TCL1AP56279 114 aa10.37□□□□□ -0.75
HMGCLL1-209ENST00000515546 BLOC1S1P78537 153 aa10.37□□□□□ -0.75
HMGCLL1-209ENST00000515546 LGALS9BQ3B8N2 356 aa10.37□□□□□ -0.75
HMGCLL1-209ENST00000515546 IQCF2Q8IXL9 164 aa10.37□□□□□ -0.75
HMGCLL1-209ENST00000515546 PGPA6NDG6 321 aa10.36□□□□□ -0.75
HMGCLL1-209ENST00000515546 SPINK4O60575 86 aa10.36□□□□□ -0.75
HMGCLL1-209ENST00000515546 Q6AWC8 147 aa10.36□□□□□ -0.75
HMGCLL1-209ENST00000515546 Q6ZR54 194 aa10.36□□□□□ -0.75
HMGCLL1-209ENST00000515546 CMTM2Q8TAZ6 248 aa10.36□□□□□ -0.75
HMGCLL1-209ENST00000515546 TP53TG3Q9ULZ0 132 aa10.36□□□□□ -0.75
HMGCLL1-209ENST00000515546 GOLT1AQ6ZVE7 132 aa10.35□□□□□ -0.75
HMGCLL1-209ENST00000515546 TMEM167BQ9NRX6 74 aa10.35□□□□□ -0.75
HMGCLL1-209ENST00000515546 KLF12Q9Y4X4 402 aa10.35□□□□□ -0.75
HMGCLL1-209ENST00000515546 NACAE9PAV3 2078 aa10.35□□□□□ -0.75
HMGCLL1-209ENST00000515546 PKHD1P08F94 4074 aa10.34□□□□□ -0.75
HMGCLL1-209ENST00000515546 TRAV26-1A0A087WT03 109 aa10.34□□□□□ -0.75
HMGCLL1-209ENST00000515546 H3BNG1 76 aa10.34□□□□□ -0.75
HMGCLL1-209ENST00000515546 TEX46H3BTG2 121 aa10.34□□□□□ -0.75
HMGCLL1-209ENST00000515546 NUDT3O95989 172 aa10.34□□□□□ -0.75
HMGCLL1-209ENST00000515546 CLLU1Q5K131 121 aa10.34□□□□□ -0.75
HMGCLL1-209ENST00000515546 LINC00336Q6ZUF6 198 aa10.34□□□□□ -0.75
HMGCLL1-209ENST00000515546 PKD1P98161 4303 aa10.33□□□□□ -0.76
HMGCLL1-209ENST00000515546 TRGV1A0A0A0MS02 117 aa10.33□□□□□ -0.76
HMGCLL1-209ENST00000515546 SERTM2A0A1B0GWG4 89 aa10.33□□□□□ -0.76
HMGCLL1-209ENST00000515546 GGTLC3B5MD39 225 aa10.33□□□□□ -0.76
HMGCLL1-209ENST00000515546 UBE2G2P60604 165 aa10.33□□□□□ -0.76
HMGCLL1-209ENST00000515546 GNG5P63218 68 aa10.33□□□□□ -0.76
HMGCLL1-209ENST00000515546 C5orf17Q8NAS9 161 aa10.33□□□□□ -0.76
HMGCLL1-209ENST00000515546 ZNRF2Q8NHG8 242 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms