RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 IGHV1OR15-1A0A075B7D0 117 aa9.01□□□□□ -0.97
CLCN3-210ENST00000515420 CTXND1A0A1B0GTU2 59 aa9.01□□□□□ -0.97
CLCN3-210ENST00000515420 RGS13O14921 159 aa9.01□□□□□ -0.97
CLCN3-210ENST00000515420 TCL1AP56279 114 aa9.01□□□□□ -0.97
CLCN3-210ENST00000515420 AKR1C8PQ5T2L2 129 aa9.01□□□□□ -0.97
CLCN3-210ENST00000515420 TMEM88Q6PEY1 159 aa9.01□□□□□ -0.97
CLCN3-210ENST00000515420 POM121L12Q8N7R1 296 aa9.01□□□□□ -0.97
CLCN3-210ENST00000515420 C11orf72Q8NBR9 251 aa9.01□□□□□ -0.97
CLCN3-210ENST00000515420 C18orf15Q96N68 181 aa9.01□□□□□ -0.97
CLCN3-210ENST00000515420 ARPC5LQ9BPX5 153 aa9.01□□□□□ -0.97
CLCN3-210ENST00000515420 CYTL1Q9NRR1 136 aa9.01□□□□□ -0.97
CLCN3-210ENST00000515420 A0A0D9SG52 128 aa9□□□□□ -0.97
CLCN3-210ENST00000515420 A0A1W2PRE2 83 aa9□□□□□ -0.97
CLCN3-210ENST00000515420 K7EQM0 130 aa9□□□□□ -0.97
CLCN3-210ENST00000515420 GOLT1AQ6ZVE7 132 aa9□□□□□ -0.97
CLCN3-210ENST00000515420 VPS13DQ5THJ4 4388 aa8.99□□□□□ -0.97
CLCN3-210ENST00000515420 FBLL1A6NHQ2 334 aaKnown RBP8.99□□□□□ -0.97
CLCN3-210ENST00000515420 F5H768 121 aa8.99□□□□□ -0.97
CLCN3-210ENST00000515420 SMLR1H3BR10 107 aa8.99□□□□□ -0.97
CLCN3-210ENST00000515420 TCRAP04437 139 aa8.99□□□□□ -0.97
CLCN3-210ENST00000515420 ZNF726P1Q15940 193 aa8.99□□□□□ -0.97
CLCN3-210ENST00000515420 RNF212Q495C1 297 aa8.99□□□□□ -0.97
CLCN3-210ENST00000515420 SSX7Q7RTT5 188 aa8.99□□□□□ -0.97
CLCN3-210ENST00000515420 NKX6-2Q9C056 277 aaPredicted RBP8.99□□□□□ -0.97
CLCN3-210ENST00000515420 GSN-AS1Q9NRJ2 163 aa8.99□□□□□ -0.97
CLCN3-210ENST00000515420 RPH3ALQ9UNE2 315 aa8.99□□□□□ -0.97
CLCN3-210ENST00000515420 GGTLC3B5MD39 225 aa8.98□□□□□ -0.97
CLCN3-210ENST00000515420 FAM3BP58499 235 aaPredicted RBP8.98□□□□□ -0.97
CLCN3-210ENST00000515420 LGALS9BQ3B8N2 356 aa8.98□□□□□ -0.97
CLCN3-210ENST00000515420 TDRG1Q3Y452 100 aa8.98□□□□□ -0.97
CLCN3-210ENST00000515420 LCE2AQ5TA79 106 aaPredicted RBP8.98□□□□□ -0.97
CLCN3-210ENST00000515420 OR11H4Q8NGC9 324 aa8.98□□□□□ -0.97
CLCN3-210ENST00000515420 NDFIP1Q9BT67 221 aa8.98□□□□□ -0.97
CLCN3-210ENST00000515420 TP53TG3Q9ULZ0 132 aa8.98□□□□□ -0.97
CLCN3-210ENST00000515420 KLF12Q9Y4X4 402 aa8.98□□□□□ -0.97
CLCN3-210ENST00000515420 DNAH6Q9C0G6 4158 aa8.97□□□□□ -0.97
CLCN3-210ENST00000515420 TRGV11A0A075B6L2 103 aa8.97□□□□□ -0.97
CLCN3-210ENST00000515420 TRAV8-1A0A0A6YYK1 113 aa8.97□□□□□ -0.97
CLCN3-210ENST00000515420 GAGE12BA1L429 117 aa8.97□□□□□ -0.97
CLCN3-210ENST00000515420 H3BNG1 76 aa8.97□□□□□ -0.97
CLCN3-210ENST00000515420 BCL2L11O43521 198 aa8.97□□□□□ -0.97
CLCN3-210ENST00000515420 SPINK4O60575 86 aa8.97□□□□□ -0.97
CLCN3-210ENST00000515420 GAGE7O76087 117 aa8.97□□□□□ -0.97
CLCN3-210ENST00000515420 SEC11BP0C7V7 166 aa8.97□□□□□ -0.97
CLCN3-210ENST00000515420 GAGE12FP0CL80 117 aa8.97□□□□□ -0.97
CLCN3-210ENST00000515420 GAGE12GP0CL81 117 aa8.97□□□□□ -0.97
CLCN3-210ENST00000515420 GAGE12IP0CL82 117 aa8.97□□□□□ -0.97
CLCN3-210ENST00000515420 SUMO1P63165 101 aaKnown RBP8.97□□□□□ -0.97
CLCN3-210ENST00000515420 GNG5P63218 68 aa8.97□□□□□ -0.97
CLCN3-210ENST00000515420 EIF5AP63241 154 aaKnown RBP8.97□□□□□ -0.97
CLCN3-210ENST00000515420 ZNF415Q09FC8 603 aa8.97□□□□□ -0.97
CLCN3-210ENST00000515420 FAM159AQ6UWV7 190 aa8.97□□□□□ -0.97
CLCN3-210ENST00000515420 Q6ZTI0 123 aa8.97□□□□□ -0.97
CLCN3-210ENST00000515420 CYB561D1Q8N8Q1 229 aa8.97□□□□□ -0.97
CLCN3-210ENST00000515420 TMEM75Q8N9X5 138 aa8.97□□□□□ -0.97
CLCN3-210ENST00000515420 ATG101Q9BSB4 218 aa8.97□□□□□ -0.97
CLCN3-210ENST00000515420 TREM1Q9NP99 234 aa8.97□□□□□ -0.97
CLCN3-210ENST00000515420 EPDR1Q9UM22 224 aa8.97□□□□□ -0.97
CLCN3-210ENST00000515420 MUC4Q99102 2169 aa8.97□□□□□ -0.97
CLCN3-210ENST00000515420 TRAV21A0A0B4J279 112 aa8.96□□□□□ -0.98
CLCN3-210ENST00000515420 KANTRA0A1W2PQU2 76 aa8.96□□□□□ -0.98
CLCN3-210ENST00000515420 MAP1LC3B2A6NCE7 125 aa8.96□□□□□ -0.98
CLCN3-210ENST00000515420 UMAD1C9J7I0 102 aa8.96□□□□□ -0.98
CLCN3-210ENST00000515420 Q6ZQT7 251 aa8.96□□□□□ -0.98
CLCN3-210ENST00000515420 UBE2DNLQ8IWF7 75 aa8.96□□□□□ -0.98
CLCN3-210ENST00000515420 IQCF2Q8IXL9 164 aa8.96□□□□□ -0.98
CLCN3-210ENST00000515420 SPXQ9BT56 116 aa8.96□□□□□ -0.98
CLCN3-210ENST00000515420 MAP1LC3BQ9GZQ8 125 aa8.96□□□□□ -0.98
CLCN3-210ENST00000515420 ARL2-SNX15V9GYD0 113 aa8.96□□□□□ -0.98
CLCN3-210ENST00000515420 NACAE9PAV3 2078 aa8.96□□□□□ -0.98
CLCN3-210ENST00000515420 TRGV2A0A075B6R0 118 aa8.95□□□□□ -0.98
CLCN3-210ENST00000515420 TRGV1A0A0A0MS02 117 aa8.95□□□□□ -0.98
CLCN3-210ENST00000515420 IGLV2-11P01706 119 aa8.95□□□□□ -0.98
CLCN3-210ENST00000515420 FLI1Q01543 452 aaPredicted RBP8.95□□□□□ -0.98
CLCN3-210ENST00000515420 DPPA3Q6W0C5 159 aa8.95□□□□□ -0.98
CLCN3-210ENST00000515420 STOML3Q8TAV4 291 aa8.95□□□□□ -0.98
CLCN3-210ENST00000515420 TVP23CQ96ET8 276 aa8.95□□□□□ -0.98
CLCN3-210ENST00000515420 KCNS1Q96KK3 526 aa8.95□□□□□ -0.98
CLCN3-210ENST00000515420 TCEAL7Q9BRU2 100 aa8.95□□□□□ -0.98
CLCN3-210ENST00000515420 ZNF471Q9BX82 626 aaPredicted RBP8.95□□□□□ -0.98
CLCN3-210ENST00000515420 FAM74A7A6NL05 159 aa8.94□□□□□ -0.98
CLCN3-210ENST00000515420 FHITP49789 147 aa8.94□□□□□ -0.98
CLCN3-210ENST00000515420 ZFP69Q49AA0 526 aa8.94□□□□□ -0.98
CLCN3-210ENST00000515420 MUC21Q5SSG8 566 aa8.94□□□□□ -0.98
CLCN3-210ENST00000515420 SAPCD1Q5SSQ6 148 aa8.94□□□□□ -0.98
CLCN3-210ENST00000515420 Q6ZNX1 250 aa8.94□□□□□ -0.98
CLCN3-210ENST00000515420 TCTE3Q8IZS6 198 aa8.94□□□□□ -0.98
CLCN3-210ENST00000515420 HIST1H2BAQ96A08 127 aa8.94□□□□□ -0.98
CLCN3-210ENST00000515420 TMPRSS5Q9H3S3 457 aa8.94□□□□□ -0.98
CLCN3-210ENST00000515420 PSG8Q9UQ74 426 aa8.94□□□□□ -0.98
CLCN3-210ENST00000515420 TRAV26-1A0A087WT03 109 aa8.93□□□□□ -0.98
CLCN3-210ENST00000515420 F6UZH7 168 aa8.93□□□□□ -0.98
CLCN3-210ENST00000515420 NUDT3O95989 172 aa8.93□□□□□ -0.98
CLCN3-210ENST00000515420 TPT1P13693 172 aaKnown RBP8.93□□□□□ -0.98
CLCN3-210ENST00000515420 HOXA5P20719 270 aa8.93□□□□□ -0.98
CLCN3-210ENST00000515420 PPT1P50897 306 aa8.93□□□□□ -0.98
CLCN3-210ENST00000515420 FGF8P55075 233 aaPredicted RBP8.93□□□□□ -0.98
CLCN3-210ENST00000515420 OR5I1Q13606 314 aa8.93□□□□□ -0.98
CLCN3-210ENST00000515420 TMEM183BQ1AE95 376 aa8.93□□□□□ -0.98
CLCN3-210ENST00000515420 TMEM183AQ8IXX5 376 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms