RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 MRPL54Q6P161 138 aaKnown RBP6.84□□□□□ -1.32
CPNE4-213ENST00000515418 ZNF575Q86XF7 245 aa6.84□□□□□ -1.32
CPNE4-213ENST00000515418 NUP35Q8NFH5 326 aa6.84□□□□□ -1.32
CPNE4-213ENST00000515418 NDFIP1Q9BT67 221 aa6.84□□□□□ -1.32
CPNE4-213ENST00000515418 COL6A5A8TX70 2615 aa6.84□□□□□ -1.32
CPNE4-213ENST00000515418 A8MWL6 223 aa6.83□□□□□ -1.32
CPNE4-213ENST00000515418 C1orf196B1AJZ1 125 aa6.83□□□□□ -1.32
CPNE4-213ENST00000515418 SSTP61278 116 aa6.83□□□□□ -1.32
CPNE4-213ENST00000515418 COX8CQ7Z4L0 72 aa6.83□□□□□ -1.32
CPNE4-213ENST00000515418 NDUFA11Q86Y39 141 aa6.83□□□□□ -1.32
CPNE4-213ENST00000515418 SPATA3Q8NHX4 192 aa6.83□□□□□ -1.32
CPNE4-213ENST00000515418 BTF3L4Q96K17 158 aa6.83□□□□□ -1.32
CPNE4-213ENST00000515418 PGLYRP4Q96LB8 373 aa6.83□□□□□ -1.32
CPNE4-213ENST00000515418 LINC00477Q96M19 166 aa6.83□□□□□ -1.32
CPNE4-213ENST00000515418 SRD5A3Q9H8P0 318 aa6.83□□□□□ -1.32
CPNE4-213ENST00000515418 C11orf21Q9P2W6 132 aa6.83□□□□□ -1.32
CPNE4-213ENST00000515418 A0A1B0GUS0 222 aa6.82□□□□□ -1.32
CPNE4-213ENST00000515418 FABP5P3A8MUU1 101 aa6.82□□□□□ -1.32
CPNE4-213ENST00000515418 ORM1P02763 201 aa6.82□□□□□ -1.32
CPNE4-213ENST00000515418 TYMSP04818 313 aa6.82□□□□□ -1.32
CPNE4-213ENST00000515418 FABP9Q0Z7S8 132 aa6.82□□□□□ -1.32
CPNE4-213ENST00000515418 FRZBQ92765 325 aa6.82□□□□□ -1.32
CPNE4-213ENST00000515418 TPPP3Q9BW30 176 aa6.82□□□□□ -1.32
CPNE4-213ENST00000515418 MUC21A0A0G2JKD1 596 aa6.82□□□□□ -1.32
CPNE4-213ENST00000515418 MUC21A0A140T8X8 626 aa6.82□□□□□ -1.32
CPNE4-213ENST00000515418 GRIFINA4D1Z8 144 aa6.82□□□□□ -1.32
CPNE4-213ENST00000515418 TMEM189A5PLL7 270 aa6.82□□□□□ -1.32
CPNE4-213ENST00000515418 KNCNA6PVL3 124 aa6.82□□□□□ -1.32
CPNE4-213ENST00000515418 SAP30O75446 220 aa6.82□□□□□ -1.32
CPNE4-213ENST00000515418 RNASE4P34096 147 aaKnown RBP6.82□□□□□ -1.32
CPNE4-213ENST00000515418 DEFB131AP59861 70 aa6.82□□□□□ -1.32
CPNE4-213ENST00000515418 MUC21Q5SSG8 566 aa6.82□□□□□ -1.32
CPNE4-213ENST00000515418 ZFAND2AQ8N6M9 145 aa6.82□□□□□ -1.32
CPNE4-213ENST00000515418 OR4B1Q8NGF8 309 aa6.82□□□□□ -1.32
CPNE4-213ENST00000515418 PPP1R14DQ9NXH3 145 aa6.82□□□□□ -1.32
CPNE4-213ENST00000515418 NAT8BQ9UHF3 227 aa6.82□□□□□ -1.32
CPNE4-213ENST00000515418 A0A0J9YX75 114 aa6.81□□□□□ -1.32
CPNE4-213ENST00000515418 PHOX2AO14813 284 aa6.81□□□□□ -1.32
CPNE4-213ENST00000515418 GPX1P07203 203 aa6.81□□□□□ -1.32
CPNE4-213ENST00000515418 SAMD13Q5VXD3 122 aa6.81□□□□□ -1.32
CPNE4-213ENST00000515418 APRG1Q8IVJ8 170 aa6.81□□□□□ -1.32
CPNE4-213ENST00000515418 ZNF256Q9Y2P7 627 aaPredicted RBP6.81□□□□□ -1.32
CPNE4-213ENST00000515418 TRAPPC1Q9Y5R8 145 aa6.81□□□□□ -1.32
CPNE4-213ENST00000515418 IGKV3D-20A0A0C4DH25 116 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 PF4P02776 101 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 CAMPP49913 170 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 RAB4BP61018 213 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 RAB5BP61020 215 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 KRTAP24-1Q3LI83 254 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 CT83Q5H943 113 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 ACTL10Q5JWF8 245 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 EBLN2Q6P2I7 272 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 FAM19A4Q96LR4 140 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 PKD1L1Q8TDX9 2849 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 TRAV12-2A0A075B6T6 113 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 TRAV9-1A0A075B6T8 112 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 M0R2Z0 102 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 HIST1H2BKO60814 126 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 HIST1H2BJP06899 126 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 TRGC1P0CF51 173 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 HIST1H2BOP23527 126 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 HIST1H2BBP33778 126 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 HIST1H2BDP58876 126 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 HIST1H2BCP62807 126 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 HIST2H2BEQ16778 126 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.8□□□□□ -1.32
CPNE4-213ENST00000515418 PRIMA1Q86XR5 153 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 HIST1H2BHQ93079 126 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 HIST1H2BNQ99877 126 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 HIST1H2BMQ99879 126 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 CITED1Q99966 193 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 SAV1Q9H4B6 383 aaPredicted RBP6.8□□□□□ -1.32
CPNE4-213ENST00000515418 SIGLEC8Q9NYZ4 499 aa6.8□□□□□ -1.32
CPNE4-213ENST00000515418 SNURFLB1AK76 121 aa6.79□□□□□ -1.32
CPNE4-213ENST00000515418 FOXA3P55318 350 aaPredicted RBP6.79□□□□□ -1.32
CPNE4-213ENST00000515418 FXYD7P58549 80 aa6.79□□□□□ -1.32
CPNE4-213ENST00000515418 LYZL1Q6UWQ5 148 aa6.79□□□□□ -1.32
CPNE4-213ENST00000515418 TMEM136Q6ZRR5 245 aa6.79□□□□□ -1.32
CPNE4-213ENST00000515418 LINC00482Q8N8I6 264 aa6.79□□□□□ -1.32
CPNE4-213ENST00000515418 SSBP4Q9BWG4 385 aaPredicted RBP6.79□□□□□ -1.32
CPNE4-213ENST00000515418 GFRA4Q9GZZ7 299 aa6.79□□□□□ -1.32
CPNE4-213ENST00000515418 MAP6D1Q9H9H5 199 aa6.79□□□□□ -1.32
CPNE4-213ENST00000515418 NAGKQ9UJ70 344 aa6.79□□□□□ -1.32
CPNE4-213ENST00000515418 LENEPQ9Y5L5 61 aa6.79□□□□□ -1.32
CPNE4-213ENST00000515418 LOC105371267A0A1B0GV96 52 aa6.78□□□□□ -1.32
CPNE4-213ENST00000515418 OR4C46A6NHA9 309 aa6.78□□□□□ -1.32
CPNE4-213ENST00000515418 ARMS2P0C7Q2 107 aa6.78□□□□□ -1.32
CPNE4-213ENST00000515418 SNRPEP62304 92 aaKnown RBP6.78□□□□□ -1.32
CPNE4-213ENST00000515418 KIAA1644Q3SXP7 199 aa6.78□□□□□ -1.32
CPNE4-213ENST00000515418 SPAG8Q99932 426 aaPredicted RBP6.78□□□□□ -1.32
CPNE4-213ENST00000515418 MRPL18Q9H0U6 180 aaKnown RBP6.78□□□□□ -1.32
CPNE4-213ENST00000515418 TRAV12-3A0A0B4J271 114 aa6.78□□□□□ -1.32
CPNE4-213ENST00000515418 FAM231BA6NCW3 169 aa6.78□□□□□ -1.32
CPNE4-213ENST00000515418 SPRY2O43597 315 aa6.78□□□□□ -1.32
CPNE4-213ENST00000515418 IGLV1-51P01701 117 aa6.78□□□□□ -1.32
CPNE4-213ENST00000515418 CRISP2P16562 243 aa6.78□□□□□ -1.32
CPNE4-213ENST00000515418 NDUFA6P56556 154 aa6.78□□□□□ -1.32
CPNE4-213ENST00000515418 SPINK13Q1W4C9 94 aa6.78□□□□□ -1.32
CPNE4-213ENST00000515418 ODF3L2Q3SX64 289 aa6.78□□□□□ -1.32
CPNE4-213ENST00000515418 LINC01559Q495D7 138 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms