RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 ARPC5O15511 151 aa8.04□□□□□ -1.12
VCAN-212ENST00000515397 IGHV3-53P01767 116 aa8.04□□□□□ -1.12
VCAN-212ENST00000515397 STAG3L2P0CL84 134 aa8.04□□□□□ -1.12
VCAN-212ENST00000515397 STAG3L3P0CL85 134 aa8.04□□□□□ -1.12
VCAN-212ENST00000515397 GCHFRP30047 84 aa8.04□□□□□ -1.12
VCAN-212ENST00000515397 LINC00612Q8N6U2 182 aa8.04□□□□□ -1.12
VCAN-212ENST00000515397 RXFP4Q8TDU9 374 aa8.04□□□□□ -1.12
VCAN-212ENST00000515397 TVP23CQ96ET8 276 aa8.04□□□□□ -1.12
VCAN-212ENST00000515397 PSMG3Q9BT73 122 aaPredicted RBP8.04□□□□□ -1.12
VCAN-212ENST00000515397 MRPL16Q9NX20 251 aaKnown RBP8.04□□□□□ -1.12
VCAN-212ENST00000515397 MDFICQ9P1T7 246 aa8.04□□□□□ -1.12
VCAN-212ENST00000515397 NACAE9PAV3 2078 aa8.03□□□□□ -1.12
VCAN-212ENST00000515397 TRGV2A0A075B6R0 118 aa8.03□□□□□ -1.12
VCAN-212ENST00000515397 RBAKDNA6NC62 111 aa8.03□□□□□ -1.12
VCAN-212ENST00000515397 FGF8P55075 233 aaPredicted RBP8.03□□□□□ -1.12
VCAN-212ENST00000515397 SUMO1P63165 101 aaKnown RBP8.03□□□□□ -1.12
VCAN-212ENST00000515397 DAZ2Q13117 558 aaKnown RBP8.03□□□□□ -1.12
VCAN-212ENST00000515397 ZNF726P1Q15940 193 aa8.03□□□□□ -1.12
VCAN-212ENST00000515397 ANXA2RQ3ZCQ2 193 aa8.03□□□□□ -1.12
VCAN-212ENST00000515397 ATG101Q9BSB4 218 aa8.03□□□□□ -1.12
VCAN-212ENST00000515397 ACTR3CQ9C0K3 210 aaPredicted RBP8.03□□□□□ -1.12
VCAN-212ENST00000515397 NAGKQ9UJ70 344 aa8.03□□□□□ -1.12
VCAN-212ENST00000515397 DNAH2Q9P225 4427 aa8.03□□□□□ -1.12
VCAN-212ENST00000515397 BORCS7-ASMTA0A0B4J1R7 106 aa8.02□□□□□ -1.13
VCAN-212ENST00000515397 GNRH2O43555 120 aa8.02□□□□□ -1.13
VCAN-212ENST00000515397 NMBP08949 121 aa8.02□□□□□ -1.13
VCAN-212ENST00000515397 SERF2P84101 59 aa8.02□□□□□ -1.13
VCAN-212ENST00000515397 TMEM183BQ1AE95 376 aa8.02□□□□□ -1.13
VCAN-212ENST00000515397 FAM74A1Q5RGS3 127 aa8.02□□□□□ -1.13
VCAN-212ENST00000515397 TMEM183AQ8IXX5 376 aa8.02□□□□□ -1.13
VCAN-212ENST00000515397 C15orf53Q8NAA6 179 aa8.02□□□□□ -1.13
VCAN-212ENST00000515397 OR11H4Q8NGC9 324 aa8.02□□□□□ -1.13
VCAN-212ENST00000515397 ASB13Q8WXK3 278 aa8.02□□□□□ -1.13
VCAN-212ENST00000515397 GNPNAT1Q96EK6 184 aaPredicted RBP8.02□□□□□ -1.13
VCAN-212ENST00000515397 ARPC5LQ9BPX5 153 aa8.02□□□□□ -1.13
VCAN-212ENST00000515397 LINC00467Q9BRT7 94 aa8.02□□□□□ -1.13
VCAN-212ENST00000515397 CYTL1Q9NRR1 136 aa8.02□□□□□ -1.13
VCAN-212ENST00000515397 GGTLC3B5MD39 225 aa8.01□□□□□ -1.13
VCAN-212ENST00000515397 SPINK4O60575 86 aa8.01□□□□□ -1.13
VCAN-212ENST00000515397 MBP02144 154 aa8.01□□□□□ -1.13
VCAN-212ENST00000515397 TCL1AP56279 114 aa8.01□□□□□ -1.13
VCAN-212ENST00000515397 UBE2G2P60604 165 aa8.01□□□□□ -1.13
VCAN-212ENST00000515397 ZNF680Q8NEM1 530 aa8.01□□□□□ -1.13
VCAN-212ENST00000515397 LINC00479Q96M42 142 aa8.01□□□□□ -1.13
VCAN-212ENST00000515397 TREM1Q9NP99 234 aa8.01□□□□□ -1.13
VCAN-212ENST00000515397 LINC00588Q9Y4M8 146 aa8.01□□□□□ -1.13
VCAN-212ENST00000515397 DNAH17Q9UFH2 4485 aa8□□□□□ -1.13
VCAN-212ENST00000515397 TRAV34A0A0B4J273 112 aa8□□□□□ -1.13
VCAN-212ENST00000515397 RTL8CO15255 209 aa8□□□□□ -1.13
VCAN-212ENST00000515397 CXorf1O96002 111 aa8□□□□□ -1.13
VCAN-212ENST00000515397 RNF212Q495C1 297 aa8□□□□□ -1.13
VCAN-212ENST00000515397 SUN5Q8TC36 379 aa8□□□□□ -1.13
VCAN-212ENST00000515397 ST6GAL2Q96JF0 529 aa8□□□□□ -1.13
VCAN-212ENST00000515397 C8orf49Q96NF6 230 aa8□□□□□ -1.13
VCAN-212ENST00000515397 TRBV7-9A0A0J9YWB2 115 aa7.99□□□□□ -1.13
VCAN-212ENST00000515397 TCRAP04437 139 aa7.99□□□□□ -1.13
VCAN-212ENST00000515397 SFTA3P0C7M3 94 aa7.99□□□□□ -1.13
VCAN-212ENST00000515397 FHITP49789 147 aa7.99□□□□□ -1.13
VCAN-212ENST00000515397 ZNF80P51504 273 aaPredicted RBP7.99□□□□□ -1.13
VCAN-212ENST00000515397 AKR1C8PQ5T2L2 129 aa7.99□□□□□ -1.13
VCAN-212ENST00000515397 Q6AWC8 147 aa7.99□□□□□ -1.13
VCAN-212ENST00000515397 FAM159AQ6UWV7 190 aa7.99□□□□□ -1.13
VCAN-212ENST00000515397 PRNTQ86SH4 94 aa7.99□□□□□ -1.13
VCAN-212ENST00000515397 VSIG2Q96IQ7 327 aa7.99□□□□□ -1.13
VCAN-212ENST00000515397 MUC4Q99102 2169 aa7.99□□□□□ -1.13
VCAN-212ENST00000515397 C11orf21Q9P2W6 132 aa7.99□□□□□ -1.13
VCAN-212ENST00000515397 EPDR1Q9UM22 224 aa7.99□□□□□ -1.13
VCAN-212ENST00000515397 PSG8Q9UQ74 426 aa7.99□□□□□ -1.13
VCAN-212ENST00000515397 CTXND1A0A1B0GTU2 59 aa7.98□□□□□ -1.13
VCAN-212ENST00000515397 A0A1B0GV50 99 aa7.98□□□□□ -1.13
VCAN-212ENST00000515397 IGLV2-11P01706 119 aa7.98□□□□□ -1.13
VCAN-212ENST00000515397 ZNF415Q09FC8 603 aa7.98□□□□□ -1.13
VCAN-212ENST00000515397 ESRGQ1W209 222 aa7.98□□□□□ -1.13
VCAN-212ENST00000515397 LGALS9BQ3B8N2 356 aa7.98□□□□□ -1.13
VCAN-212ENST00000515397 IBA57Q5T440 356 aaKnown RBP7.98□□□□□ -1.13
VCAN-212ENST00000515397 Q6ZR54 194 aa7.98□□□□□ -1.13
VCAN-212ENST00000515397 C5orf17Q8NAS9 161 aa7.98□□□□□ -1.13
VCAN-212ENST00000515397 ZNRF2Q8NHG8 242 aa7.98□□□□□ -1.13
VCAN-212ENST00000515397 TMED6Q8WW62 240 aa7.98□□□□□ -1.13
VCAN-212ENST00000515397 TMEM167BQ9NRX6 74 aa7.98□□□□□ -1.13
VCAN-212ENST00000515397 LENEPQ9Y5L5 61 aa7.98□□□□□ -1.13
VCAN-212ENST00000515397 A0A096LPF7 62 aa7.97□□□□□ -1.13
VCAN-212ENST00000515397 TAAR5O14804 337 aa7.97□□□□□ -1.13
VCAN-212ENST00000515397 IFNA7P01567 189 aa7.97□□□□□ -1.13
VCAN-212ENST00000515397 CCL18P55774 89 aa7.97□□□□□ -1.13
VCAN-212ENST00000515397 KCNRGQ8N5I3 272 aa7.97□□□□□ -1.13
VCAN-212ENST00000515397 TMEM75Q8N9X5 138 aa7.97□□□□□ -1.13
VCAN-212ENST00000515397 ZNF479Q96JC4 524 aa7.97□□□□□ -1.13
VCAN-212ENST00000515397 FAT2Q9NYQ8 4349 aa7.96□□□□□ -1.13
VCAN-212ENST00000515397 TRAV21A0A0B4J279 112 aa7.96□□□□□ -1.14
VCAN-212ENST00000515397 IGHV3-16A0A0C4DH30 117 aa7.96□□□□□ -1.14
VCAN-212ENST00000515397 PRSS29PA6NIE9 313 aa7.96□□□□□ -1.14
VCAN-212ENST00000515397 PAX4O43316 350 aa7.96□□□□□ -1.14
VCAN-212ENST00000515397 GCGP01275 180 aa7.96□□□□□ -1.14
VCAN-212ENST00000515397 TYMSP04818 313 aa7.96□□□□□ -1.14
VCAN-212ENST00000515397 FLI1Q01543 452 aaPredicted RBP7.96□□□□□ -1.14
VCAN-212ENST00000515397 FHL2Q14192 279 aa7.96□□□□□ -1.14
VCAN-212ENST00000515397 HECTD4Q9Y4D8 3996 aa7.96□□□□□ -1.14
VCAN-212ENST00000515397 TRGV11A0A075B6L2 103 aa7.95□□□□□ -1.14
VCAN-212ENST00000515397 MAP1LC3B2A6NCE7 125 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms