RNA–Protein interactions for RNA: ENST00000513024.5

LIMCH1-218, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-218ENST00000513024 J3QQQ9 107 aa7.06□□□□□ -1.28
LIMCH1-218ENST00000513024 PSPNO60542 156 aa7.06□□□□□ -1.28
LIMCH1-218ENST00000513024 Q6ZS92 163 aa7.06□□□□□ -1.28
LIMCH1-218ENST00000513024 STHQ8IWL8 128 aa7.06□□□□□ -1.28
LIMCH1-218ENST00000513024 Q96MF0 132 aa7.06□□□□□ -1.28
LIMCH1-218ENST00000513024 GPR179Q6PRD1 2367 aa7.05□□□□□ -1.28
LIMCH1-218ENST00000513024 LINC01620Q4KN68 170 aa7.05□□□□□ -1.28
LIMCH1-218ENST00000513024 C16orf54Q6UWD8 224 aa7.05□□□□□ -1.28
LIMCH1-218ENST00000513024 NOTCH4Q99466 2003 aa7.05□□□□□ -1.28
LIMCH1-218ENST00000513024 M0QXV9 152 aa7.05□□□□□ -1.28
LIMCH1-218ENST00000513024 EFNA2O43921 213 aa7.05□□□□□ -1.28
LIMCH1-218ENST00000513024 CRYGSP22914 178 aa7.05□□□□□ -1.28
LIMCH1-218ENST00000513024 CFHR2P36980 270 aa7.05□□□□□ -1.28
LIMCH1-218ENST00000513024 Q6ZRM9 215 aa7.05□□□□□ -1.28
LIMCH1-218ENST00000513024 LYPD1Q8N2G4 141 aa7.05□□□□□ -1.28
LIMCH1-218ENST00000513024 IGFBPL1Q8WX77 278 aa7.05□□□□□ -1.28
LIMCH1-218ENST00000513024 SCRT2Q9NQ03 307 aa7.05□□□□□ -1.28
LIMCH1-218ENST00000513024 ZNF492Q9P255 531 aa7.05□□□□□ -1.28
LIMCH1-218ENST00000513024 C8orf31Q8N9H6 132 aa7.05□□□□□ -1.28
LIMCH1-218ENST00000513024 ORMDL1Q9P0S3 153 aa7.05□□□□□ -1.28
LIMCH1-218ENST00000513024 PHF3Q92576 2039 aaKnown RBP7.05□□□□□ -1.28
LIMCH1-218ENST00000513024 HERVK_113P63121 156 aa7.05□□□□□ -1.28
LIMCH1-218ENST00000513024 LINC00643Q86TS7 51 aa7.05□□□□□ -1.28
LIMCH1-218ENST00000513024 Q8TAT8 98 aa7.05□□□□□ -1.28
LIMCH1-218ENST00000513024 RPL15P61313 204 aaKnown RBP7.04□□□□□ -1.28
LIMCH1-218ENST00000513024 TRBV25-1A0A075B6N4 114 aa7.04□□□□□ -1.28
LIMCH1-218ENST00000513024 PCP2Q8IVA1 136 aa7.04□□□□□ -1.28
LIMCH1-218ENST00000513024 WFDC11Q8NEX6 87 aa7.04□□□□□ -1.28
LIMCH1-218ENST00000513024 TMEM133Q9H2Q1 129 aa7.04□□□□□ -1.28
LIMCH1-218ENST00000513024 LYNX1G3V0Z9 82 aa7.04□□□□□ -1.28
LIMCH1-218ENST00000513024 LYNX1P0DP58 116 aa7.04□□□□□ -1.28
LIMCH1-218ENST00000513024 RBX1P62877 108 aa7.04□□□□□ -1.28
LIMCH1-218ENST00000513024 C9orf106Q8NAJ2 232 aa7.04□□□□□ -1.28
LIMCH1-218ENST00000513024 PCNX1Q96RV3 2341 aa7.03□□□□□ -1.28
LIMCH1-218ENST00000513024 BUB3O43684 328 aa7.03□□□□□ -1.28
LIMCH1-218ENST00000513024 MLANAQ16655 118 aa7.03□□□□□ -1.28
LIMCH1-218ENST00000513024 ZNF747Q9BV97 191 aa7.03□□□□□ -1.28
LIMCH1-218ENST00000513024 WNK1Q9H4A3 2382 aa7.03□□□□□ -1.28
LIMCH1-218ENST00000513024 M0R1W7 72 aa7.03□□□□□ -1.28
LIMCH1-218ENST00000513024 ZNF493Q6ZR52 646 aa7.03□□□□□ -1.28
LIMCH1-218ENST00000513024 Q86TA4 180 aa7.03□□□□□ -1.28
LIMCH1-218ENST00000513024 C20orf197Q8N268 126 aa7.03□□□□□ -1.28
LIMCH1-218ENST00000513024 VWCEQ96DN2 955 aa7.03□□□□□ -1.28
LIMCH1-218ENST00000513024 RCHY1Q96PM5 261 aa7.03□□□□□ -1.28
LIMCH1-218ENST00000513024 THSD7BQ9C0I4 1608 aa7.03□□□□□ -1.28
LIMCH1-218ENST00000513024 PFN2P35080 140 aa7.03□□□□□ -1.28
LIMCH1-218ENST00000513024 MRPL14Q6P1L8 145 aaKnown RBP7.03□□□□□ -1.28
LIMCH1-218ENST00000513024 C20orf78Q9BR46 151 aa7.03□□□□□ -1.28
LIMCH1-218ENST00000513024 PLXNA2O75051 1894 aa7.03□□□□□ -1.28
LIMCH1-218ENST00000513024 TMEM213A2RRL7 107 aa7.03□□□□□ -1.28
LIMCH1-218ENST00000513024 LINC00473A8K010 186 aa7.03□□□□□ -1.28
LIMCH1-218ENST00000513024 PRSS46E5RG02 174 aa7.03□□□□□ -1.28
LIMCH1-218ENST00000513024 QRFPP83859 136 aa7.03□□□□□ -1.28
LIMCH1-218ENST00000513024 DTX1Q86Y01 620 aa7.03□□□□□ -1.28
LIMCH1-218ENST00000513024 C3orf22Q8N5N4 141 aa7.03□□□□□ -1.28
LIMCH1-218ENST00000513024 FLVCR1-AS1Q8TAF5 88 aa7.03□□□□□ -1.28
LIMCH1-218ENST00000513024 DKK2Q9UBU2 259 aa7.03□□□□□ -1.28
LIMCH1-218ENST00000513024 V9GYV3 84 aa7.03□□□□□ -1.28
LIMCH1-218ENST00000513024 C15orf62A8K5M9 175 aa7.02□□□□□ -1.29
LIMCH1-218ENST00000513024 OOSP1A8MZH6 123 aa7.02□□□□□ -1.29
LIMCH1-218ENST00000513024 LINC01545Q5VT33 79 aa7.02□□□□□ -1.29
LIMCH1-218ENST00000513024 IGFL4Q6B9Z1 124 aa7.02□□□□□ -1.29
LIMCH1-218ENST00000513024 FAM231DQ6ZW35 169 aa7.02□□□□□ -1.29
LIMCH1-218ENST00000513024 C14orf132Q9NPU4 83 aa7.02□□□□□ -1.29
LIMCH1-218ENST00000513024 MTCL1Q9Y4B5 1905 aaKnown RBP7.02□□□□□ -1.29
LIMCH1-218ENST00000513024 RNF223E7ERA6 249 aa7.02□□□□□ -1.29
LIMCH1-218ENST00000513024 H3BT86 120 aa7.02□□□□□ -1.29
LIMCH1-218ENST00000513024 MT-ATP8P03928 68 aa7.02□□□□□ -1.29
LIMCH1-218ENST00000513024 TMEM219Q86XT9 240 aa7.02□□□□□ -1.29
LIMCH1-218ENST00000513024 CDH23Q9H251 3354 aa7.02□□□□□ -1.29
LIMCH1-218ENST00000513024 PCNX2A6NKB5 2137 aa7.02□□□□□ -1.29
LIMCH1-218ENST00000513024 NDUFS7O75251 213 aa7.02□□□□□ -1.29
LIMCH1-218ENST00000513024 TRGV9Q99603 122 aa7.02□□□□□ -1.29
LIMCH1-218ENST00000513024 HEATR5AQ86XA9 2040 aa7.02□□□□□ -1.29
LIMCH1-218ENST00000513024 SS18Q15532 418 aa7.02□□□□□ -1.29
LIMCH1-218ENST00000513024 LINC00477Q96M19 166 aa7.02□□□□□ -1.29
LIMCH1-218ENST00000513024 IGHV3-73A0A0B4J1V6 119 aa7.01□□□□□ -1.29
LIMCH1-218ENST00000513024 SRRM4A7MD48 611 aaKnown RBP7.01□□□□□ -1.29
LIMCH1-218ENST00000513024 TRBV12-3P01733 135 aa7.01□□□□□ -1.29
LIMCH1-218ENST00000513024 TRPT1Q86TN4 253 aaKnown RBP7.01□□□□□ -1.29
LIMCH1-218ENST00000513024 ZNF329Q86UD4 541 aa7.01□□□□□ -1.29
LIMCH1-218ENST00000513024 DENND4CQ5VZ89 1909 aa7.01□□□□□ -1.29
LIMCH1-218ENST00000513024 WIPF3A6NGB9 483 aa7.01□□□□□ -1.29
LIMCH1-218ENST00000513024 TDRG1Q3Y452 100 aa7.01□□□□□ -1.29
LIMCH1-218ENST00000513024 MRPL51Q4U2R6 128 aaKnown RBP7.01□□□□□ -1.29
LIMCH1-218ENST00000513024 SMIM27A0A1W2PRY6 76 aa7.01□□□□□ -1.29
LIMCH1-218ENST00000513024 SMIM9A6NGZ8 99 aa7.01□□□□□ -1.29
LIMCH1-218ENST00000513024 IGLV3-12A0A075B6K2 115 aa7.01□□□□□ -1.29
LIMCH1-218ENST00000513024 IGHV1OR15-1A0A075B7D0 117 aa7.01□□□□□ -1.29
LIMCH1-218ENST00000513024 LRRC75A-AS1Q8N1F1 130 aa7.01□□□□□ -1.29
LIMCH1-218ENST00000513024 HS3ST6Q96QI5 342 aa7.01□□□□□ -1.29
LIMCH1-218ENST00000513024 TRBV10-2A0A0K0K1G8 114 aa7□□□□□ -1.29
LIMCH1-218ENST00000513024 NDUFS5O43920 106 aa7□□□□□ -1.29
LIMCH1-218ENST00000513024 CYYR1Q96J86 154 aa7□□□□□ -1.29
LIMCH1-218ENST00000513024 DOCK8Q8NF50 2099 aa7□□□□□ -1.29
LIMCH1-218ENST00000513024 IGLV3-32A0A0A0MS00 114 aa7□□□□□ -1.29
LIMCH1-218ENST00000513024 CRYGCP07315 174 aa7□□□□□ -1.29
LIMCH1-218ENST00000513024 NDPQ00604 133 aa7□□□□□ -1.29
LIMCH1-218ENST00000513024 SIGLEC15Q6ZMC9 328 aa7□□□□□ -1.29
LIMCH1-218ENST00000513024 C9orf139Q6ZV77 190 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms