RNA–Protein interactions for RNA: ENST00000512385.5

SNCAIP-217, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-217ENST00000512385 IGKV1-17P01599 117 aa10.8□□□□□ -0.68
SNCAIP-217ENST00000512385 IGKV2D-40P01614 121 aaPredicted RBP10.8□□□□□ -0.68
SNCAIP-217ENST00000512385 HOXB4P17483 251 aaPredicted RBP10.8□□□□□ -0.68
SNCAIP-217ENST00000512385 VMA21Q3ZAQ7 101 aa10.8□□□□□ -0.68
SNCAIP-217ENST00000512385 CCDC144NLQ6NUI1 221 aa10.8□□□□□ -0.68
SNCAIP-217ENST00000512385 ZNF562Q6V9R5 426 aa10.8□□□□□ -0.68
SNCAIP-217ENST00000512385 CUBNO60494 3623 aa10.8□□□□□ -0.68
SNCAIP-217ENST00000512385 PRSS1P07477 247 aa10.79□□□□□ -0.68
SNCAIP-217ENST00000512385 PHLDA1Q8WV24 401 aaPredicted RBP10.79□□□□□ -0.68
SNCAIP-217ENST00000512385 ONECUT1Q9UBC0 465 aa10.79□□□□□ -0.68
SNCAIP-217ENST00000512385 PRRC2AP48634 2157 aaKnown RBP10.79□□□□□ -0.68
SNCAIP-217ENST00000512385 TRBV25-1A0A075B6N4 114 aa10.79□□□□□ -0.68
SNCAIP-217ENST00000512385 IGHV3OR16-8A0A075B7F1 116 aa10.79□□□□□ -0.68
SNCAIP-217ENST00000512385 NPIPB5A8MRT5 1133 aa10.79□□□□□ -0.68
SNCAIP-217ENST00000512385 MAPKAPK5-AS1Q8N8E1 139 aa10.79□□□□□ -0.68
SNCAIP-217ENST00000512385 DPF1Q92782 380 aa10.79□□□□□ -0.68
SNCAIP-217ENST00000512385 CCL19Q99731 98 aa10.79□□□□□ -0.68
SNCAIP-217ENST00000512385 SPAG8Q99932 426 aaPredicted RBP10.79□□□□□ -0.68
SNCAIP-217ENST00000512385 FBXL15Q9H469 300 aa10.79□□□□□ -0.68
SNCAIP-217ENST00000512385 MXRA5Q9NR99 2828 aa10.79□□□□□ -0.68
SNCAIP-217ENST00000512385 TMEM189A5PLL7 270 aa10.78□□□□□ -0.68
SNCAIP-217ENST00000512385 SH2D1AO60880 128 aa10.78□□□□□ -0.68
SNCAIP-217ENST00000512385 LEPP41159 167 aa10.78□□□□□ -0.68
SNCAIP-217ENST00000512385 KLRD1Q13241 179 aa10.78□□□□□ -0.68
SNCAIP-217ENST00000512385 MAPK1IP1LQ8NDC0 245 aa10.78□□□□□ -0.68
SNCAIP-217ENST00000512385 RASL11BQ9BPW5 248 aa10.78□□□□□ -0.68
SNCAIP-217ENST00000512385 SPANXB1Q9NS25 103 aaPredicted RBP10.78□□□□□ -0.68
SNCAIP-217ENST00000512385 KAAG1Q9UBP8 84 aa10.78□□□□□ -0.68
SNCAIP-217ENST00000512385 UNC79Q9P2D8 2635 aa10.78□□□□□ -0.68
SNCAIP-217ENST00000512385 CREBBPQ92793 2442 aa10.78□□□□□ -0.68
SNCAIP-217ENST00000512385 EGR2P11161 476 aaPredicted RBP10.78□□□□□ -0.68
SNCAIP-217ENST00000512385 ZNF80P51504 273 aaPredicted RBP10.78□□□□□ -0.68
SNCAIP-217ENST00000512385 SFTA2Q6UW10 78 aa10.78□□□□□ -0.68
SNCAIP-217ENST00000512385 ZNF493Q6ZR52 646 aa10.78□□□□□ -0.68
SNCAIP-217ENST00000512385 SIVA1O15304 175 aa10.77□□□□□ -0.68
SNCAIP-217ENST00000512385 FCER1GP30273 86 aa10.77□□□□□ -0.68
SNCAIP-217ENST00000512385 DLX6P56179 175 aa10.77□□□□□ -0.68
SNCAIP-217ENST00000512385 TMEM155Q4W5P6 130 aa10.77□□□□□ -0.68
SNCAIP-217ENST00000512385 IL4P05112 153 aa10.77□□□□□ -0.69
SNCAIP-217ENST00000512385 SMIM17P0DL12 118 aa10.77□□□□□ -0.69
SNCAIP-217ENST00000512385 CT45A10P0DMU9 189 aa10.77□□□□□ -0.69
SNCAIP-217ENST00000512385 HLA-DMBP28068 263 aa10.77□□□□□ -0.69
SNCAIP-217ENST00000512385 CEACAM3P40198 252 aa10.77□□□□□ -0.69
SNCAIP-217ENST00000512385 EFNA4P52798 201 aa10.77□□□□□ -0.69
SNCAIP-217ENST00000512385 ODF1Q14990 250 aa10.77□□□□□ -0.69
SNCAIP-217ENST00000512385 ZC2HC1BQ5TFG8 222 aa10.77□□□□□ -0.69
SNCAIP-217ENST00000512385 TIMD4Q96H15 378 aa10.77□□□□□ -0.69
SNCAIP-217ENST00000512385 FOXC2Q99958 501 aa10.77□□□□□ -0.69
SNCAIP-217ENST00000512385 TMEM160Q9NX00 188 aa10.77□□□□□ -0.69
SNCAIP-217ENST00000512385 U3KQK5 164 aa10.77□□□□□ -0.69
SNCAIP-217ENST00000512385 IGHV1-8P0DP01 117 aa10.76□□□□□ -0.69
SNCAIP-217ENST00000512385 CD300EQ496F6 205 aaPredicted RBP10.76□□□□□ -0.69
SNCAIP-217ENST00000512385 TEX22C9J3V5 150 aa10.76□□□□□ -0.69
SNCAIP-217ENST00000512385 RAB9AP51151 201 aa10.76□□□□□ -0.69
SNCAIP-217ENST00000512385 ATP5J2P56134 94 aa10.76□□□□□ -0.69
SNCAIP-217ENST00000512385 GATD1Q8NB37 220 aa10.76□□□□□ -0.69
SNCAIP-217ENST00000512385 SIGLEC9Q9Y336 463 aa10.76□□□□□ -0.69
SNCAIP-217ENST00000512385 TRAV40A0A0B4J280 105 aa10.75□□□□□ -0.69
SNCAIP-217ENST00000512385 ZNF575Q86XF7 245 aa10.75□□□□□ -0.69
SNCAIP-217ENST00000512385 IGLL5B9A064 214 aa10.75□□□□□ -0.69
SNCAIP-217ENST00000512385 FLNBO75369 2602 aaKnown RBP10.75□□□□□ -0.69
SNCAIP-217ENST00000512385 IGHV3-35A0A0C4DH35 117 aa10.74□□□□□ -0.69
SNCAIP-217ENST00000512385 PRSS47A8MTI9 375 aa10.74□□□□□ -0.69
SNCAIP-217ENST00000512385 I3L2K1 104 aa10.74□□□□□ -0.69
SNCAIP-217ENST00000512385 IGHV3-23P01764 117 aa10.74□□□□□ -0.69
SNCAIP-217ENST00000512385 ATP6V0BQ99437 205 aa10.74□□□□□ -0.69
SNCAIP-217ENST00000512385 SHANK2-AS3Q9BTD1 123 aa10.74□□□□□ -0.69
SNCAIP-217ENST00000512385 TMEM14CQ9P0S9 112 aa10.74□□□□□ -0.69
SNCAIP-217ENST00000512385 ITPR3Q14573 2671 aa10.74□□□□□ -0.69
SNCAIP-217ENST00000512385 COX6B1P14854 86 aa10.74□□□□□ -0.69
SNCAIP-217ENST00000512385 CEND1Q8N111 149 aa10.74□□□□□ -0.69
SNCAIP-217ENST00000512385 ZNF479Q96JC4 524 aa10.74□□□□□ -0.69
SNCAIP-217ENST00000512385 C20orf78Q9BR46 151 aa10.74□□□□□ -0.69
SNCAIP-217ENST00000512385 IGHV3OR16-10A0A075B7F0 116 aa10.73□□□□□ -0.69
SNCAIP-217ENST00000512385 IGHV4-30-2A0A087WSY4 118 aa10.73□□□□□ -0.69
SNCAIP-217ENST00000512385 IGHV4-61A0A0C4DH41 118 aa10.73□□□□□ -0.69
SNCAIP-217ENST00000512385 ZNF491Q8N8L2 437 aa10.73□□□□□ -0.69
SNCAIP-217ENST00000512385 TMEM158Q8WZ71 300 aa10.73□□□□□ -0.69
SNCAIP-217ENST00000512385 FLNAP21333 2647 aaKnown RBP10.73□□□□□ -0.69
SNCAIP-217ENST00000512385 TRAV26-1A0A087WT03 109 aa10.73□□□□□ -0.69
SNCAIP-217ENST00000512385 K7EQM0 130 aa10.73□□□□□ -0.69
SNCAIP-217ENST00000512385 PLA2G2AP14555 144 aa10.73□□□□□ -0.69
SNCAIP-217ENST00000512385 FOXI2Q6ZQN5 318 aa10.73□□□□□ -0.69
SNCAIP-217ENST00000512385 PPP1R27Q86WC6 154 aa10.73□□□□□ -0.69
SNCAIP-217ENST00000512385 RNF185Q96GF1 192 aa10.73□□□□□ -0.69
SNCAIP-217ENST00000512385 MRPL35Q9NZE8 188 aaKnown RBP10.73□□□□□ -0.69
SNCAIP-217ENST00000512385 TRAV26-2A0A0B4J265 109 aa10.72□□□□□ -0.69
SNCAIP-217ENST00000512385 E9PLD3 99 aa10.72□□□□□ -0.69
SNCAIP-217ENST00000512385 IGKCP01834 107 aa10.72□□□□□ -0.69
SNCAIP-217ENST00000512385 PLGLAQ15195 96 aa10.72□□□□□ -0.69
SNCAIP-217ENST00000512385 K7EIM0 57 aa10.72□□□□□ -0.69
SNCAIP-217ENST00000512385 MRPS12O15235 138 aaKnown RBP10.72□□□□□ -0.69
SNCAIP-217ENST00000512385 ORM1P02763 201 aa10.72□□□□□ -0.69
SNCAIP-217ENST00000512385 CKS1BP61024 79 aa10.72□□□□□ -0.69
SNCAIP-217ENST00000512385 RNF125Q96EQ8 232 aa10.72□□□□□ -0.69
SNCAIP-217ENST00000512385 A0A1B0GW15 77 aa10.72□□□□□ -0.69
SNCAIP-217ENST00000512385 H3BRN7 92 aa10.72□□□□□ -0.69
SNCAIP-217ENST00000512385 LMO4P61968 165 aa10.72□□□□□ -0.69
SNCAIP-217ENST00000512385 C12orf74Q32Q52 190 aa10.72□□□□□ -0.69
SNCAIP-217ENST00000512385 PVRIGQ6DKI7 326 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms