RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 C10orf113Q5VZT2 155 aa7.84□□□□□ -1.16
RNF4-216ENST00000511859 Q6ZRG5 221 aa7.84□□□□□ -1.16
RNF4-216ENST00000511859 C9orf62Q8N4C0 152 aa7.84□□□□□ -1.16
RNF4-216ENST00000511859 TMEM37Q8WXS4 190 aa7.84□□□□□ -1.16
RNF4-216ENST00000511859 PARD6GQ9BYG4 376 aaPredicted RBP7.84□□□□□ -1.16
RNF4-216ENST00000511859 ARV1Q9H2C2 271 aa7.84□□□□□ -1.16
RNF4-216ENST00000511859 SLC25A32Q9H2D1 315 aa7.84□□□□□ -1.16
RNF4-216ENST00000511859 TRAV8-2A0A0B4J237 113 aa7.83□□□□□ -1.16
RNF4-216ENST00000511859 SNURFLB1AK76 121 aa7.83□□□□□ -1.16
RNF4-216ENST00000511859 NPIPB6E9PJ23 425 aa7.83□□□□□ -1.16
RNF4-216ENST00000511859 PLP1P60201 277 aa7.83□□□□□ -1.16
RNF4-216ENST00000511859 MORN5Q5VZ52 161 aa7.83□□□□□ -1.16
RNF4-216ENST00000511859 IGFL4Q6B9Z1 124 aa7.83□□□□□ -1.16
RNF4-216ENST00000511859 LINC00305Q7Z4B0 112 aa7.83□□□□□ -1.16
RNF4-216ENST00000511859 ZNF738Q8NE65 137 aa7.83□□□□□ -1.16
RNF4-216ENST00000511859 OR8A1Q8NGG7 326 aa7.83□□□□□ -1.16
RNF4-216ENST00000511859 DNAJC4Q9NNZ3 241 aa7.83□□□□□ -1.16
RNF4-216ENST00000511859 MSRB1Q9NZV6 116 aa7.83□□□□□ -1.16
RNF4-216ENST00000511859 LY96Q9Y6Y9 160 aa7.83□□□□□ -1.16
RNF4-216ENST00000511859 TRAV5A0A0B4J249 113 aa7.82□□□□□ -1.16
RNF4-216ENST00000511859 H3BRN7 92 aa7.82□□□□□ -1.16
RNF4-216ENST00000511859 SNRPCP09234 159 aaKnown RBP7.82□□□□□ -1.16
RNF4-216ENST00000511859 RAB2AP61019 212 aa7.82□□□□□ -1.16
RNF4-216ENST00000511859 HIST1H1AQ02539 215 aaPredicted RBP7.82□□□□□ -1.16
RNF4-216ENST00000511859 RNF182Q8N6D2 247 aa7.82□□□□□ -1.16
RNF4-216ENST00000511859 OR1L4Q8NGR5 311 aa7.82□□□□□ -1.16
RNF4-216ENST00000511859 OR2G3Q8NGZ4 309 aa7.82□□□□□ -1.16
RNF4-216ENST00000511859 TMPRSS5Q9H3S3 457 aa7.82□□□□□ -1.16
RNF4-216ENST00000511859 KCNIP2Q9NS61 270 aa7.82□□□□□ -1.16
RNF4-216ENST00000511859 FAM30AQ9NZY2 134 aa7.82□□□□□ -1.16
RNF4-216ENST00000511859 DAZ2Q13117 558 aaKnown RBP7.81□□□□□ -1.16
RNF4-216ENST00000511859 FAM122CQ6P4D5 195 aa7.81□□□□□ -1.16
RNF4-216ENST00000511859 LINC00528Q8N1L1 170 aa7.81□□□□□ -1.16
RNF4-216ENST00000511859 PFDN5Q99471 154 aa7.81□□□□□ -1.16
RNF4-216ENST00000511859 SHANK2-AS3Q9BTD1 123 aa7.81□□□□□ -1.16
RNF4-216ENST00000511859 TIMM9Q9Y5J7 89 aa7.81□□□□□ -1.16
RNF4-216ENST00000511859 ICOSQ9Y6W8 199 aa7.81□□□□□ -1.16
RNF4-216ENST00000511859 HMGB3O15347 200 aaKnown RBP7.8□□□□□ -1.16
RNF4-216ENST00000511859 EVI2AP22794 236 aa7.8□□□□□ -1.16
RNF4-216ENST00000511859 PSG3Q16557 428 aa7.8□□□□□ -1.16
RNF4-216ENST00000511859 PXDC1Q5TGL8 231 aa7.8□□□□□ -1.16
RNF4-216ENST00000511859 LYPD5Q6UWN5 251 aa7.8□□□□□ -1.16
RNF4-216ENST00000511859 MIR17HGQ75NE6 70 aa7.8□□□□□ -1.16
RNF4-216ENST00000511859 PSMG3Q9BT73 122 aaPredicted RBP7.8□□□□□ -1.16
RNF4-216ENST00000511859 TRGV2A0A075B6R0 118 aa7.79□□□□□ -1.16
RNF4-216ENST00000511859 H3BTX0 84 aa7.79□□□□□ -1.16
RNF4-216ENST00000511859 ZNF324O75467 553 aaPredicted RBP7.79□□□□□ -1.16
RNF4-216ENST00000511859 TPT1P13693 172 aaKnown RBP7.79□□□□□ -1.16
RNF4-216ENST00000511859 ACOT6Q3I5F7 207 aaPredicted RBP7.79□□□□□ -1.16
RNF4-216ENST00000511859 Q6ZTI0 123 aa7.79□□□□□ -1.16
RNF4-216ENST00000511859 OR10G4Q8NGN3 311 aa7.79□□□□□ -1.16
RNF4-216ENST00000511859 OR10G9Q8NGN4 311 aa7.79□□□□□ -1.16
RNF4-216ENST00000511859 OR10G7Q8NGN6 311 aa7.79□□□□□ -1.16
RNF4-216ENST00000511859 TMED6Q8WW62 240 aa7.79□□□□□ -1.16
RNF4-216ENST00000511859 LINC00467Q9BRT7 94 aa7.79□□□□□ -1.16
RNF4-216ENST00000511859 LRCOL1A6NCL2 159 aa7.78□□□□□ -1.16
RNF4-216ENST00000511859 PAX4O43316 350 aa7.78□□□□□ -1.16
RNF4-216ENST00000511859 PSCAO43653 123 aa7.78□□□□□ -1.16
RNF4-216ENST00000511859 PYYP10082 97 aa7.78□□□□□ -1.16
RNF4-216ENST00000511859 SLAQ13239 276 aa7.78□□□□□ -1.16
RNF4-216ENST00000511859 S100A7AQ86SG5 101 aa7.78□□□□□ -1.16
RNF4-216ENST00000511859 FUT9Q9Y231 359 aa7.78□□□□□ -1.16
RNF4-216ENST00000511859 RNF213Q63HN8 5207 aa7.78□□□□□ -1.16
RNF4-216ENST00000511859 A0A1W2PPV4 95 aa7.77□□□□□ -1.17
RNF4-216ENST00000511859 OR10J4P0C629 311 aa7.77□□□□□ -1.17
RNF4-216ENST00000511859 PRB4P10163 310 aaPredicted RBP7.77□□□□□ -1.17
RNF4-216ENST00000511859 RPL7P18124 248 aaKnown RBP7.77□□□□□ -1.17
RNF4-216ENST00000511859 CDC34P49427 236 aaPredicted RBP7.77□□□□□ -1.17
RNF4-216ENST00000511859 EIF5AP63241 154 aaKnown RBP7.77□□□□□ -1.17
RNF4-216ENST00000511859 SERF2P84101 59 aa7.77□□□□□ -1.17
RNF4-216ENST00000511859 MRPL23Q16540 153 aaKnown RBP7.77□□□□□ -1.17
RNF4-216ENST00000511859 AKR1C8PQ5T2L2 129 aa7.77□□□□□ -1.17
RNF4-216ENST00000511859 SLC51BQ86UW2 128 aa7.77□□□□□ -1.17
RNF4-216ENST00000511859 C10orf126Q8N4M7 172 aa7.77□□□□□ -1.17
RNF4-216ENST00000511859 STOML3Q8TAV4 291 aa7.77□□□□□ -1.17
RNF4-216ENST00000511859 SLC25A2Q9BXI2 301 aa7.77□□□□□ -1.17
RNF4-216ENST00000511859 OR7C2O60412 319 aa7.76□□□□□ -1.17
RNF4-216ENST00000511859 FHITP49789 147 aa7.76□□□□□ -1.17
RNF4-216ENST00000511859 Q6ZSA8 131 aa7.76□□□□□ -1.17
RNF4-216ENST00000511859 NEGR1Q7Z3B1 354 aa7.76□□□□□ -1.17
RNF4-216ENST00000511859 BPIFA4PQ86YQ2 179 aa7.76□□□□□ -1.17
RNF4-216ENST00000511859 Q8N814 137 aa7.76□□□□□ -1.17
RNF4-216ENST00000511859 FAM213BQ8TBF2 198 aa7.76□□□□□ -1.17
RNF4-216ENST00000511859 LRRC20Q8TCA0 184 aa7.76□□□□□ -1.17
RNF4-216ENST00000511859 BLNKQ8WV28 456 aa7.76□□□□□ -1.17
RNF4-216ENST00000511859 RPUSD4Q96CM3 377 aaKnown RBP7.76□□□□□ -1.17
RNF4-216ENST00000511859 FAM167A-AS1Q96KT0 104 aa7.76□□□□□ -1.17
RNF4-216ENST00000511859 PYGO2Q9BRQ0 406 aa7.76□□□□□ -1.17
RNF4-216ENST00000511859 MRPL32Q9BYC8 188 aaKnown RBP7.76□□□□□ -1.17
RNF4-216ENST00000511859 PRO0255Q9UI72 69 aa7.76□□□□□ -1.17
RNF4-216ENST00000511859 PKHD1L1Q86WI1 4243 aa7.75□□□□□ -1.17
RNF4-216ENST00000511859 A0A1B0GV50 99 aa7.75□□□□□ -1.17
RNF4-216ENST00000511859 H3BQ15 152 aa7.75□□□□□ -1.17
RNF4-216ENST00000511859 MRPS12O15235 138 aaKnown RBP7.75□□□□□ -1.17
RNF4-216ENST00000511859 MBP02144 154 aa7.75□□□□□ -1.17
RNF4-216ENST00000511859 SEC11BP0C7V7 166 aa7.75□□□□□ -1.17
RNF4-216ENST00000511859 KIR3DS1Q14943 382 aa7.75□□□□□ -1.17
RNF4-216ENST00000511859 ZNF726P1Q15940 193 aa7.75□□□□□ -1.17
RNF4-216ENST00000511859 FAM74A1Q5RGS3 127 aa7.75□□□□□ -1.17
RNF4-216ENST00000511859 GFI1BQ5VTD9 330 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms