RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 PF4P02776 101 aa11.37□□□□□ -0.59
SCLT1-209ENST00000511426 TFPI2P48307 235 aa11.37□□□□□ -0.59
SCLT1-209ENST00000511426 ZFAND2AQ8N6M9 145 aa11.37□□□□□ -0.59
SCLT1-209ENST00000511426 FAM110AQ9BQ89 295 aa11.37□□□□□ -0.59
SCLT1-209ENST00000511426 TRAV21A0A0B4J279 112 aa11.36□□□□□ -0.59
SCLT1-209ENST00000511426 A8MTW9 85 aa11.36□□□□□ -0.59
SCLT1-209ENST00000511426 TSPOP30536 169 aa11.36□□□□□ -0.59
SCLT1-209ENST00000511426 LEPP41159 167 aa11.36□□□□□ -0.59
SCLT1-209ENST00000511426 ACTL10Q5JWF8 245 aa11.36□□□□□ -0.59
SCLT1-209ENST00000511426 FLNBO75369 2602 aaKnown RBP11.36□□□□□ -0.59
SCLT1-209ENST00000511426 KLLNB2CW77 178 aa11.36□□□□□ -0.59
SCLT1-209ENST00000511426 HLA-DQA1P01909 254 aa11.36□□□□□ -0.59
SCLT1-209ENST00000511426 S100A8P05109 93 aa11.36□□□□□ -0.59
SCLT1-209ENST00000511426 INSL3P51460 131 aa11.36□□□□□ -0.59
SCLT1-209ENST00000511426 ZNF80P51504 273 aaPredicted RBP11.36□□□□□ -0.59
SCLT1-209ENST00000511426 TCL1AP56279 114 aa11.36□□□□□ -0.59
SCLT1-209ENST00000511426 BORCS7Q96B45 105 aa11.36□□□□□ -0.59
SCLT1-209ENST00000511426 CLUHP3Q96NS8 147 aa11.36□□□□□ -0.59
SCLT1-209ENST00000511426 BAHCC1Q9P281 2608 aa11.35□□□□□ -0.59
SCLT1-209ENST00000511426 IGLV1-51P01701 117 aa11.35□□□□□ -0.59
SCLT1-209ENST00000511426 TRGC2P03986 189 aa11.35□□□□□ -0.59
SCLT1-209ENST00000511426 LINC00482Q8N8I6 264 aa11.35□□□□□ -0.59
SCLT1-209ENST00000511426 GTSF1Q8WW33 167 aa11.35□□□□□ -0.59
SCLT1-209ENST00000511426 ZNF256Q9Y2P7 627 aaPredicted RBP11.35□□□□□ -0.59
SCLT1-209ENST00000511426 F6UB75 175 aa11.34□□□□□ -0.59
SCLT1-209ENST00000511426 GPX1P07203 203 aa11.34□□□□□ -0.59
SCLT1-209ENST00000511426 HLA-DRB4P13762 266 aa11.34□□□□□ -0.59
SCLT1-209ENST00000511426 TRAPPC1Q9Y5R8 145 aa11.34□□□□□ -0.59
SCLT1-209ENST00000511426 HLA-DRB4X5D2U9 266 aa11.34□□□□□ -0.59
SCLT1-209ENST00000511426 A0A1B0GXF2 115 aa11.33□□□□□ -0.6
SCLT1-209ENST00000511426 F2Z2F3 143 aa11.33□□□□□ -0.6
SCLT1-209ENST00000511426 PHOX2AO14813 284 aa11.33□□□□□ -0.6
SCLT1-209ENST00000511426 SAP30O75446 220 aa11.33□□□□□ -0.6
SCLT1-209ENST00000511426 ORM1P02763 201 aa11.33□□□□□ -0.6
SCLT1-209ENST00000511426 HBBP68871 147 aa11.33□□□□□ -0.6
SCLT1-209ENST00000511426 MAP6D1Q9H9H5 199 aa11.33□□□□□ -0.6
SCLT1-209ENST00000511426 F8P00451 2351 aa11.33□□□□□ -0.6
SCLT1-209ENST00000511426 CUBNO60494 3623 aa11.33□□□□□ -0.6
SCLT1-209ENST00000511426 A0A1B0GUT8 65 aa11.33□□□□□ -0.6
SCLT1-209ENST00000511426 ZNF705DP0CH99 300 aaPredicted RBP11.33□□□□□ -0.6
SCLT1-209ENST00000511426 ZNF705BP0CI00 300 aaPredicted RBP11.33□□□□□ -0.6
SCLT1-209ENST00000511426 PRB4P10163 310 aaPredicted RBP11.33□□□□□ -0.6
SCLT1-209ENST00000511426 CTRLP40313 264 aa11.33□□□□□ -0.6
SCLT1-209ENST00000511426 DEFB131AP59861 70 aa11.33□□□□□ -0.6
SCLT1-209ENST00000511426 RIGQ13278 110 aa11.33□□□□□ -0.6
SCLT1-209ENST00000511426 HIST2H2BDQ6DRA6 164 aa11.33□□□□□ -0.6
SCLT1-209ENST00000511426 SNURFLB1AK76 121 aa11.32□□□□□ -0.6
SCLT1-209ENST00000511426 S100A6P06703 90 aa11.32□□□□□ -0.6
SCLT1-209ENST00000511426 IGLC6P0CF74 106 aa11.32□□□□□ -0.6
SCLT1-209ENST00000511426 CDKN1BP46527 198 aa11.32□□□□□ -0.6
SCLT1-209ENST00000511426 CNFNQ9BYD5 112 aa11.32□□□□□ -0.6
SCLT1-209ENST00000511426 SELENOKQ9Y6D0 94 aa11.32□□□□□ -0.6
SCLT1-209ENST00000511426 GDF5OSQ5U4N7 250 aa11.31□□□□□ -0.6
SCLT1-209ENST00000511426 MRPL54Q6P161 138 aaKnown RBP11.31□□□□□ -0.6
SCLT1-209ENST00000511426 TMEM136Q6ZRR5 245 aa11.31□□□□□ -0.6
SCLT1-209ENST00000511426 FER1L6-AS1Q8NA97 138 aa11.31□□□□□ -0.6
SCLT1-209ENST00000511426 GATD1Q8NB37 220 aa11.31□□□□□ -0.6
SCLT1-209ENST00000511426 CYSRT1A8MQ03 144 aa11.3□□□□□ -0.6
SCLT1-209ENST00000511426 MED14OSP0DP75 135 aa11.3□□□□□ -0.6
SCLT1-209ENST00000511426 FABP9Q0Z7S8 132 aa11.3□□□□□ -0.6
SCLT1-209ENST00000511426 DNLZQ5SXM8 178 aa11.3□□□□□ -0.6
SCLT1-209ENST00000511426 FRZBQ92765 325 aa11.3□□□□□ -0.6
SCLT1-209ENST00000511426 KCNS1Q96KK3 526 aa11.3□□□□□ -0.6
SCLT1-209ENST00000511426 PGLYRP4Q96LB8 373 aa11.3□□□□□ -0.6
SCLT1-209ENST00000511426 MCRIP2Q9BUT9 160 aaKnown RBP11.3□□□□□ -0.6
SCLT1-209ENST00000511426 IGKV3D-20A0A0C4DH25 116 aa11.3□□□□□ -0.6
SCLT1-209ENST00000511426 C7orf71A4D174 169 aa11.3□□□□□ -0.6
SCLT1-209ENST00000511426 H3BMM0 161 aa11.3□□□□□ -0.6
SCLT1-209ENST00000511426 HIST1H2BKO60814 126 aa11.3□□□□□ -0.6
SCLT1-209ENST00000511426 AMBPP02760 352 aa11.3□□□□□ -0.6
SCLT1-209ENST00000511426 HIST1H2BJP06899 126 aa11.3□□□□□ -0.6
SCLT1-209ENST00000511426 HIST1H2BOP23527 126 aa11.3□□□□□ -0.6
SCLT1-209ENST00000511426 HIST1H2BBP33778 126 aa11.3□□□□□ -0.6
SCLT1-209ENST00000511426 HIST1H2BDP58876 126 aa11.3□□□□□ -0.6
SCLT1-209ENST00000511426 HIST1H2BCP62807 126 aa11.3□□□□□ -0.6
SCLT1-209ENST00000511426 HIST2H2BEQ16778 126 aa11.3□□□□□ -0.6
SCLT1-209ENST00000511426 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.3□□□□□ -0.6
SCLT1-209ENST00000511426 HIST1H2BHQ93079 126 aa11.3□□□□□ -0.6
SCLT1-209ENST00000511426 HIST1H2BNQ99877 126 aa11.3□□□□□ -0.6
SCLT1-209ENST00000511426 HIST1H2BMQ99879 126 aa11.3□□□□□ -0.6
SCLT1-209ENST00000511426 MRPL18Q9H0U6 180 aaKnown RBP11.3□□□□□ -0.6
SCLT1-209ENST00000511426 OR11H12B2RN74 326 aa11.29□□□□□ -0.6
SCLT1-209ENST00000511426 OR5AL1P0C617 328 aa11.29□□□□□ -0.6
SCLT1-209ENST00000511426 TRGC1P0CF51 173 aa11.29□□□□□ -0.6
SCLT1-209ENST00000511426 GZMBP10144 247 aa11.29□□□□□ -0.6
SCLT1-209ENST00000511426 DEFB1P60022 68 aa11.29□□□□□ -0.6
SCLT1-209ENST00000511426 BEAN1Q3B7T3 259 aa11.29□□□□□ -0.6
SCLT1-209ENST00000511426 PRR9Q5T870 116 aa11.29□□□□□ -0.6
SCLT1-209ENST00000511426 C9orf66Q5T8R8 295 aa11.29□□□□□ -0.6
SCLT1-209ENST00000511426 AMTNQ6UX39 209 aa11.29□□□□□ -0.6
SCLT1-209ENST00000511426 ZFP82Q8N141 532 aa11.29□□□□□ -0.6
SCLT1-209ENST00000511426 SPINK4O60575 86 aa11.28□□□□□ -0.6
SCLT1-209ENST00000511426 CD33P20138 364 aa11.28□□□□□ -0.6
SCLT1-209ENST00000511426 ODF3L2Q3SX64 289 aa11.28□□□□□ -0.6
SCLT1-209ENST00000511426 TDRG1Q3Y452 100 aa11.28□□□□□ -0.6
SCLT1-209ENST00000511426 C20orf144Q9BQM9 153 aa11.28□□□□□ -0.6
SCLT1-209ENST00000511426 ZNF747Q9BV97 191 aa11.28□□□□□ -0.6
SCLT1-209ENST00000511426 SSBP4Q9BWG4 385 aaPredicted RBP11.28□□□□□ -0.6
SCLT1-209ENST00000511426 C2CD3Q4AC94 2353 aa11.28□□□□□ -0.6
SCLT1-209ENST00000511426 RNASE4P34096 147 aaKnown RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms