RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 PRB1P04280 392 aa1.87□□□□□ -2.11
MBD4-209ENST00000511009 HMGA1P17096 107 aaKnown RBP1.87□□□□□ -2.11
MBD4-209ENST00000511009 BRS3P32247 399 aa1.87□□□□□ -2.11
MBD4-209ENST00000511009 SSR2P43308 183 aa1.87□□□□□ -2.11
MBD4-209ENST00000511009 SOSTDC1Q6X4U4 206 aa1.87□□□□□ -2.11
MBD4-209ENST00000511009 FAM24BQ8N5W8 94 aa1.87□□□□□ -2.11
MBD4-209ENST00000511009 ADAT1Q9BUB4 502 aaKnown RBP1.87□□□□□ -2.11
MBD4-209ENST00000511009 TMEM126AQ9H061 195 aa1.87□□□□□ -2.11
MBD4-209ENST00000511009 HS3ST2Q9Y278 367 aa1.87□□□□□ -2.11
MBD4-209ENST00000511009 GOLGA4Q13439 2230 aaKnown RBP1.87□□□□□ -2.11
MBD4-209ENST00000511009 ATG2AQ2TAZ0 1938 aa1.87□□□□□ -2.11
MBD4-209ENST00000511009 SPAG17Q6Q759 2223 aa1.86□□□□□ -2.11
MBD4-209ENST00000511009 KMT2BQ9UMN6 2715 aaPredicted RBP1.86□□□□□ -2.11
MBD4-209ENST00000511009 TMEM256-PLSCR3K7ERE1 68 aa1.86□□□□□ -2.11
MBD4-209ENST00000511009 PGRMC1O00264 195 aaKnown RBP1.86□□□□□ -2.11
MBD4-209ENST00000511009 TIMM17BO60830 172 aa1.86□□□□□ -2.11
MBD4-209ENST00000511009 GADD45GO95257 159 aa1.86□□□□□ -2.11
MBD4-209ENST00000511009 IFNA14P01570 189 aa1.86□□□□□ -2.11
MBD4-209ENST00000511009 OGNP20774 298 aaKnown RBP1.86□□□□□ -2.11
MBD4-209ENST00000511009 SNRPFP62306 86 aaKnown RBP1.86□□□□□ -2.11
MBD4-209ENST00000511009 RHOGP84095 191 aa1.86□□□□□ -2.11
MBD4-209ENST00000511009 CDK5R1Q15078 307 aa1.86□□□□□ -2.11
MBD4-209ENST00000511009 EIF5AL1Q6IS14 154 aaKnown RBP1.86□□□□□ -2.11
MBD4-209ENST00000511009 ZNF720Q7Z2F6 126 aa1.86□□□□□ -2.11
MBD4-209ENST00000511009 CROCCP2Q86T23 111 aa1.86□□□□□ -2.11
MBD4-209ENST00000511009 C12orf29Q8N999 325 aa1.86□□□□□ -2.11
MBD4-209ENST00000511009 LINC00301Q8NCQ3 95 aa1.86□□□□□ -2.11
MBD4-209ENST00000511009 TEX47Q8TBZ9 253 aa1.86□□□□□ -2.11
MBD4-209ENST00000511009 SLC25A21Q9BQT8 299 aaPredicted RBP1.86□□□□□ -2.11
MBD4-209ENST00000511009 MAST4O15021 2626 aa1.86□□□□□ -2.11
MBD4-209ENST00000511009 NAV2Q8IVL1 2488 aa1.85□□□□□ -2.11
MBD4-209ENST00000511009 USP34Q70CQ2 3546 aa1.85□□□□□ -2.11
MBD4-209ENST00000511009 FANCMQ8IYD8 2048 aa1.85□□□□□ -2.11
MBD4-209ENST00000511009 ASCC3Q8N3C0 2202 aaKnown RBP1.85□□□□□ -2.11
MBD4-209ENST00000511009 A0A1B0GV72 72 aa1.85□□□□□ -2.11
MBD4-209ENST00000511009 HCRTO43612 131 aa1.85□□□□□ -2.11
MBD4-209ENST00000511009 OR1I1O60431 355 aa1.85□□□□□ -2.11
MBD4-209ENST00000511009 PFDN1O60925 122 aa1.85□□□□□ -2.11
MBD4-209ENST00000511009 TNFSF15O95150 251 aa1.85□□□□□ -2.11
MBD4-209ENST00000511009 GLRXP35754 106 aa1.85□□□□□ -2.11
MBD4-209ENST00000511009 DYNLT3P51808 116 aa1.85□□□□□ -2.11
MBD4-209ENST00000511009 C10orf55Q5SWW7 151 aa1.85□□□□□ -2.11
MBD4-209ENST00000511009 SFT2D1Q8WV19 159 aa1.85□□□□□ -2.11
MBD4-209ENST00000511009 DYDC1Q8WWB3 177 aa1.85□□□□□ -2.11
MBD4-209ENST00000511009 TEX37Q96LM6 180 aa1.85□□□□□ -2.11
MBD4-209ENST00000511009 LINC00467Q9BRT7 94 aa1.85□□□□□ -2.11
MBD4-209ENST00000511009 NPCDR1Q9BY65 106 aa1.85□□□□□ -2.11
MBD4-209ENST00000511009 C14orf132Q9NPU4 83 aa1.85□□□□□ -2.11
MBD4-209ENST00000511009 ZNF462Q96JM2 2506 aa1.85□□□□□ -2.11
MBD4-209ENST00000511009 KNTC1P50748 2209 aa1.85□□□□□ -2.11
MBD4-209ENST00000511009 SETXQ7Z333 2677 aaKnown RBP1.84□□□□□ -2.11
MBD4-209ENST00000511009 SPTAN1Q13813 2472 aaKnown RBP1.84□□□□□ -2.11
MBD4-209ENST00000511009 KNL1Q8NG31 2342 aa1.84□□□□□ -2.11
MBD4-209ENST00000511009 DMXL1Q9Y485 3027 aa1.84□□□□□ -2.11
MBD4-209ENST00000511009 HELZ2Q9BYK8 2649 aaKnown RBP1.84□□□□□ -2.11
MBD4-209ENST00000511009 HECTD1Q9ULT8 2610 aa1.84□□□□□ -2.11
MBD4-209ENST00000511009 C2orf70A6NJV1 201 aa1.84□□□□□ -2.11
MBD4-209ENST00000511009 CRHP06850 196 aa1.84□□□□□ -2.11
MBD4-209ENST00000511009 KRTAP12-4P60329 112 aa1.84□□□□□ -2.11
MBD4-209ENST00000511009 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.84□□□□□ -2.11
MBD4-209ENST00000511009 REG4Q9BYZ8 158 aa1.84□□□□□ -2.11
MBD4-209ENST00000511009 CENPHQ9H3R5 247 aa1.84□□□□□ -2.11
MBD4-209ENST00000511009 MED11Q9P086 117 aa1.84□□□□□ -2.11
MBD4-209ENST00000511009 GCN1Q92616 2671 aaKnown RBP1.84□□□□□ -2.11
MBD4-209ENST00000511009 VPS13AQ96RL7 3174 aa1.84□□□□□ -2.12
MBD4-209ENST00000511009 RP1L1Q8IWN7 2480 aaPredicted RBP1.83□□□□□ -2.12
MBD4-209ENST00000511009 CITO14578 2027 aa1.83□□□□□ -2.12
MBD4-209ENST00000511009 PTPRQQ9UMZ3 2332 aa1.83□□□□□ -2.12
MBD4-209ENST00000511009 DSPP15924 2871 aaKnown RBP1.83□□□□□ -2.12
MBD4-209ENST00000511009 PVALEFA0A1B0GWK0 134 aa1.83□□□□□ -2.12
MBD4-209ENST00000511009 IGKV2-29A2NJV5 120 aaPredicted RBP1.83□□□□□ -2.12
MBD4-209ENST00000511009 A8MWV9 139 aa1.83□□□□□ -2.12
MBD4-209ENST00000511009 GPR31O00270 319 aa1.83□□□□□ -2.12
MBD4-209ENST00000511009 TRGC2P03986 189 aa1.83□□□□□ -2.12
MBD4-209ENST00000511009 RAB4BP61018 213 aa1.83□□□□□ -2.12
MBD4-209ENST00000511009 EIF3IQ13347 325 aaKnown RBP1.83□□□□□ -2.12
MBD4-209ENST00000511009 DEFB133Q30KQ1 61 aa1.83□□□□□ -2.12
MBD4-209ENST00000511009 DCUN1D2Q6PH85 259 aa1.83□□□□□ -2.12
MBD4-209ENST00000511009 SMIM15Q7Z3B0 74 aa1.83□□□□□ -2.12
MBD4-209ENST00000511009 GKN2Q86XP6 184 aa1.83□□□□□ -2.12
MBD4-209ENST00000511009 C3orf56Q8N813 242 aa1.83□□□□□ -2.12
MBD4-209ENST00000511009 NUP35Q8NFH5 326 aa1.83□□□□□ -2.12
MBD4-209ENST00000511009 OR2T35Q8NGX2 323 aa1.83□□□□□ -2.12
MBD4-209ENST00000511009 OR4C6Q8NH72 309 aa1.83□□□□□ -2.12
MBD4-209ENST00000511009 PLEKHB2Q96CS7 222 aa1.83□□□□□ -2.12
MBD4-209ENST00000511009 ZNF714Q96N38 554 aa1.83□□□□□ -2.12
MBD4-209ENST00000511009 POPDC3Q9HBV1 291 aa1.83□□□□□ -2.12
MBD4-209ENST00000511009 MED9Q9NWA0 146 aa1.83□□□□□ -2.12
MBD4-209ENST00000511009 IGSF10Q6WRI0 2623 aa1.83□□□□□ -2.12
MBD4-209ENST00000511009 CCDC88CQ9P219 2028 aa1.83□□□□□ -2.12
MBD4-209ENST00000511009 CREBBPQ92793 2442 aa1.82□□□□□ -2.12
MBD4-209ENST00000511009 PI4KAP42356 2102 aa1.82□□□□□ -2.12
MBD4-209ENST00000511009 PDCD11Q14690 1871 aaKnown RBP1.82□□□□□ -2.12
MBD4-209ENST00000511009 NUP210Q8TEM1 1887 aaPredicted RBP1.82□□□□□ -2.12
MBD4-209ENST00000511009 FRYLO94915 3013 aa1.82□□□□□ -2.12
MBD4-209ENST00000511009 TRAV12-1A0A0B4J245 112 aa1.82□□□□□ -2.12
MBD4-209ENST00000511009 FAM92AA1XBS5 289 aa1.82□□□□□ -2.12
MBD4-209ENST00000511009 MAP1LC3B2A6NCE7 125 aa1.82□□□□□ -2.12
MBD4-209ENST00000511009 MRPS14O60783 128 aaKnown RBP1.82□□□□□ -2.12
MBD4-209ENST00000511009 LYZL6O75951 148 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms