RNA–Protein interactions for RNA: ENST00000510884.5

NUP54-210, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-210ENST00000510884 ABCA12Q86UK0 2595 aa3.8□□□□□ -1.8
NUP54-210ENST00000510884 SLX4Q8IY92 1834 aa3.8□□□□□ -1.8
NUP54-210ENST00000510884 PTPRZ1P23471 2315 aaPredicted RBP3.8□□□□□ -1.8
NUP54-210ENST00000510884 MDFIC2A0A1B0GVS7 189 aa3.8□□□□□ -1.8
NUP54-210ENST00000510884 IGLL5B9A064 214 aa3.8□□□□□ -1.8
NUP54-210ENST00000510884 F2Z2F3 143 aa3.8□□□□□ -1.8
NUP54-210ENST00000510884 INSL3P51460 131 aa3.8□□□□□ -1.8
NUP54-210ENST00000510884 ERVK-16P61578 105 aa3.8□□□□□ -1.8
NUP54-210ENST00000510884 ZNF678Q5SXM1 525 aa3.8□□□□□ -1.8
NUP54-210ENST00000510884 SERP2Q8N6R1 65 aa3.8□□□□□ -1.8
NUP54-210ENST00000510884 WFDC11Q8NEX6 87 aa3.8□□□□□ -1.8
NUP54-210ENST00000510884 TOMM6Q96B49 74 aa3.8□□□□□ -1.8
NUP54-210ENST00000510884 CHCHD1Q96BP2 118 aaKnown RBP3.8□□□□□ -1.8
NUP54-210ENST00000510884 TXNDC17Q9BRA2 123 aa3.8□□□□□ -1.8
NUP54-210ENST00000510884 FAM103A1Q9BTL3 118 aaKnown RBP3.8□□□□□ -1.8
NUP54-210ENST00000510884 RNF126Q9BV68 326 aa3.8□□□□□ -1.8
NUP54-210ENST00000510884 C16orf95Q9H693 158 aa3.8□□□□□ -1.8
NUP54-210ENST00000510884 LINC00527Q9UJ94 153 aa3.8□□□□□ -1.8
NUP54-210ENST00000510884 MAP1BP46821 2468 aaKnown RBP3.8□□□□□ -1.8
NUP54-210ENST00000510884 DDX60LQ5H9U9 1706 aaKnown RBP3.79□□□□□ -1.8
NUP54-210ENST00000510884 GVINP1Q7Z2Y8 2422 aa3.79□□□□□ -1.8
NUP54-210ENST00000510884 DOCK3Q8IZD9 2030 aa3.79□□□□□ -1.8
NUP54-210ENST00000510884 TRAV8-3A0A0A6YYJ7 113 aa3.79□□□□□ -1.8
NUP54-210ENST00000510884 TRAV17A0A0B4J275 112 aa3.79□□□□□ -1.8
NUP54-210ENST00000510884 PIGBOS1A0A0B4J2F0 54 aa3.79□□□□□ -1.8
NUP54-210ENST00000510884 H3BP45 60 aa3.79□□□□□ -1.8
NUP54-210ENST00000510884 NDUFC1O43677 76 aa3.79□□□□□ -1.8
NUP54-210ENST00000510884 NUPR1O60356 82 aa3.79□□□□□ -1.8
NUP54-210ENST00000510884 TCL1BO95988 128 aa3.79□□□□□ -1.8
NUP54-210ENST00000510884 ASAH2BP0C7U1 165 aa3.79□□□□□ -1.8
NUP54-210ENST00000510884 AQP1P29972 269 aa3.79□□□□□ -1.8
NUP54-210ENST00000510884 FCGR2CP31995 323 aa3.79□□□□□ -1.8
NUP54-210ENST00000510884 ABCA11PQ4W5N1 156 aa3.79□□□□□ -1.8
NUP54-210ENST00000510884 CLEC19AQ6UXS0 136 aa3.79□□□□□ -1.8
NUP54-210ENST00000510884 KRTAP11-1Q8IUC1 163 aa3.79□□□□□ -1.8
NUP54-210ENST00000510884 Q8N7P7 452 aa3.79□□□□□ -1.8
NUP54-210ENST00000510884 OR5C1Q8NGR4 320 aa3.79□□□□□ -1.8
NUP54-210ENST00000510884 ZNF799Q96GE5 643 aa3.79□□□□□ -1.8
NUP54-210ENST00000510884 C11orf68Q9H3H3 251 aaKnown RBP3.79□□□□□ -1.8
NUP54-210ENST00000510884 DPH3P1Q9H4G8 78 aa3.79□□□□□ -1.8
NUP54-210ENST00000510884 F11RQ9Y624 299 aaKnown RBP3.79□□□□□ -1.8
NUP54-210ENST00000510884 PLXNA4Q9HCM2 1894 aa3.79□□□□□ -1.8
NUP54-210ENST00000510884 TSC2P49815 1807 aa3.79□□□□□ -1.8
NUP54-210ENST00000510884 COL5A3P25940 1745 aaPredicted RBP3.78□□□□□ -1.8
NUP54-210ENST00000510884 GBF1Q92538 1859 aa3.78□□□□□ -1.8
NUP54-210ENST00000510884 DUOX1Q9NRD9 1551 aa3.78□□□□□ -1.8
NUP54-210ENST00000510884 IGHV3OR16-9A0A0B4J2B5 98 aa3.78□□□□□ -1.8
NUP54-210ENST00000510884 H0Y9J4 135 aa3.78□□□□□ -1.8
NUP54-210ENST00000510884 PCBD1P61457 104 aa3.78□□□□□ -1.8
NUP54-210ENST00000510884 SNRPD3P62318 126 aaKnown RBP3.78□□□□□ -1.8
NUP54-210ENST00000510884 RPL23P62829 140 aaKnown RBP3.78□□□□□ -1.8
NUP54-210ENST00000510884 RPL30P62888 115 aaKnown RBP3.78□□□□□ -1.8
NUP54-210ENST00000510884 SP6Q3SY56 376 aa3.78□□□□□ -1.8
NUP54-210ENST00000510884 ORMDL2Q53FV1 153 aa3.78□□□□□ -1.8
NUP54-210ENST00000510884 C5orf38Q86SI9 138 aa3.78□□□□□ -1.8
NUP54-210ENST00000510884 LINC00643Q86TS7 51 aa3.78□□□□□ -1.8
NUP54-210ENST00000510884 RPP25LQ8N5L8 163 aaKnown RBP3.78□□□□□ -1.8
NUP54-210ENST00000510884 MORN4Q8NDC4 146 aa3.78□□□□□ -1.8
NUP54-210ENST00000510884 H1FXQ92522 213 aaKnown RBP3.78□□□□□ -1.8
NUP54-210ENST00000510884 VSIG2Q96IQ7 327 aa3.78□□□□□ -1.8
NUP54-210ENST00000510884 DSCR8Q96T75 97 aa3.78□□□□□ -1.8
NUP54-210ENST00000510884 SLC25A22Q9H936 323 aa3.78□□□□□ -1.8
NUP54-210ENST00000510884 PLEKHA3Q9HB20 300 aa3.78□□□□□ -1.8
NUP54-210ENST00000510884 ZNF286AQ9HBT8 521 aa3.78□□□□□ -1.8
NUP54-210ENST00000510884 DYNLRB1Q9NP97 96 aa3.78□□□□□ -1.8
NUP54-210ENST00000510884 KIF25-AS1Q9Y6Z4 181 aa3.78□□□□□ -1.8
NUP54-210ENST00000510884 UBR3Q6ZT12 1888 aa3.77□□□□□ -1.81
NUP54-210ENST00000510884 LAMA4Q16363 1823 aa3.77□□□□□ -1.81
NUP54-210ENST00000510884 FRYQ5TBA9 3013 aa3.77□□□□□ -1.81
NUP54-210ENST00000510884 MYO9AB2RTY4 2548 aa3.77□□□□□ -1.81
NUP54-210ENST00000510884 ZFC3H1O60293 1989 aaKnown RBP3.77□□□□□ -1.81
NUP54-210ENST00000510884 TRBV20OR9-2A0A075B6H5 130 aa3.77□□□□□ -1.81
NUP54-210ENST00000510884 IGHV3-20A0A0C4DH32 117 aa3.77□□□□□ -1.81
NUP54-210ENST00000510884 IGHV3-38A0A0C4DH36 116 aa3.77□□□□□ -1.81
NUP54-210ENST00000510884 C2orf70A6NJV1 201 aa3.77□□□□□ -1.81
NUP54-210ENST00000510884 IL4P05112 153 aa3.77□□□□□ -1.81
NUP54-210ENST00000510884 MDKP21741 143 aaPredicted RBP3.77□□□□□ -1.81
NUP54-210ENST00000510884 CD70P32970 193 aa3.77□□□□□ -1.81
NUP54-210ENST00000510884 RPL34P49207 117 aaKnown RBP3.77□□□□□ -1.81
NUP54-210ENST00000510884 CAV3P56539 151 aa3.77□□□□□ -1.81
NUP54-210ENST00000510884 HIST1H4AP62805 103 aaKnown RBP3.77□□□□□ -1.81
NUP54-210ENST00000510884 HBBP68871 147 aa3.77□□□□□ -1.81
NUP54-210ENST00000510884 FAM120AOSQ5T036 256 aa3.77□□□□□ -1.81
NUP54-210ENST00000510884 EBLN2Q6P2I7 272 aa3.77□□□□□ -1.81
NUP54-210ENST00000510884 Q6ZVQ6 151 aa3.77□□□□□ -1.81
NUP54-210ENST00000510884 LCA10Q71F78 164 aa3.77□□□□□ -1.81
NUP54-210ENST00000510884 CCL17Q92583 94 aa3.77□□□□□ -1.81
NUP54-210ENST00000510884 ABHD14BQ96IU4 210 aa3.77□□□□□ -1.81
NUP54-210ENST00000510884 SLC25A2Q9BXI2 301 aa3.77□□□□□ -1.81
NUP54-210ENST00000510884 NXT2Q9NPJ8 142 aaKnown RBP3.77□□□□□ -1.81
NUP54-210ENST00000510884 ESM1Q9NQ30 184 aa3.77□□□□□ -1.81
NUP54-210ENST00000510884 CALYQ9NYX4 217 aa3.77□□□□□ -1.81
NUP54-210ENST00000510884 GNG13Q9P2W3 67 aa3.77□□□□□ -1.81
NUP54-210ENST00000510884 LY96Q9Y6Y9 160 aa3.77□□□□□ -1.81
NUP54-210ENST00000510884 MYLKQ15746 1914 aa3.77□□□□□ -1.81
NUP54-210ENST00000510884 TEX15Q9BXT5 2789 aa3.77□□□□□ -1.81
NUP54-210ENST00000510884 FANCMQ8IYD8 2048 aa3.77□□□□□ -1.81
NUP54-210ENST00000510884 MAST2Q6P0Q8 1798 aa3.76□□□□□ -1.81
NUP54-210ENST00000510884 DOT1LQ8TEK3 1739 aa3.76□□□□□ -1.81
NUP54-210ENST00000510884 ALPK3Q96L96 1907 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms