RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 KHDC3LQ587J8 217 aa18.43■□□□□ 0.54
SNF8-208ENST00000510195 FFAR4Q5NUL3 377 aa18.43■□□□□ 0.54
SNF8-208ENST00000510195 PRR9Q5T870 116 aa18.43■□□□□ 0.54
SNF8-208ENST00000510195 SCGB1C1Q8TD33 95 aa18.43■□□□□ 0.54
SNF8-208ENST00000510195 ST6GAL2Q96JF0 529 aa18.43■□□□□ 0.54
SNF8-208ENST00000510195 ARPC5LQ9BPX5 153 aa18.43■□□□□ 0.54
SNF8-208ENST00000510195 LENEPQ9Y5L5 61 aa18.43■□□□□ 0.54
SNF8-208ENST00000510195 A0A096LPF7 62 aa18.42■□□□□ 0.54
SNF8-208ENST00000510195 RPL12P30050 165 aaKnown RBP18.42■□□□□ 0.54
SNF8-208ENST00000510195 SLAQ13239 276 aa18.42■□□□□ 0.54
SNF8-208ENST00000510195 UBE2L3P68036 154 aaKnown RBP18.41■□□□□ 0.54
SNF8-208ENST00000510195 ZNF266Q14584 549 aa18.41■□□□□ 0.54
SNF8-208ENST00000510195 TP53TG3Q9ULZ0 132 aa18.41■□□□□ 0.54
SNF8-208ENST00000510195 ZNF415Q09FC8 603 aa18.39■□□□□ 0.53
SNF8-208ENST00000510195 TMED6Q8WW62 240 aa18.39■□□□□ 0.53
SNF8-208ENST00000510195 PRO0255Q9UI72 69 aa18.39■□□□□ 0.53
SNF8-208ENST00000510195 C16orf90A8MZG2 172 aa18.38■□□□□ 0.53
SNF8-208ENST00000510195 DIRC3C9JPN6 131 aa18.38■□□□□ 0.53
SNF8-208ENST00000510195 Q6AWC8 147 aa18.38■□□□□ 0.53
SNF8-208ENST00000510195 Q8TAT8 98 aa18.38■□□□□ 0.53
SNF8-208ENST00000510195 KRTAP1-5Q9BYS1 174 aa18.38■□□□□ 0.53
SNF8-208ENST00000510195 LRP1BQ9NZR2 4599 aa18.38■□□□□ 0.53
SNF8-208ENST00000510195 HSPG2P98160 4391 aa18.37■□□□□ 0.53
SNF8-208ENST00000510195 PAX4O43316 350 aa18.37■□□□□ 0.53
SNF8-208ENST00000510195 Q6ZQT7 251 aa18.37■□□□□ 0.53
SNF8-208ENST00000510195 ARL6IP6Q8N6S5 226 aa18.37■□□□□ 0.53
SNF8-208ENST00000510195 MBD2Q9UBB5 411 aa18.37■□□□□ 0.53
SNF8-208ENST00000510195 ICOSQ9Y6W8 199 aa18.37■□□□□ 0.53
SNF8-208ENST00000510195 FAM74A1Q5RGS3 127 aa18.36■□□□□ 0.53
SNF8-208ENST00000510195 SMIM3Q9BZL3 60 aa18.36■□□□□ 0.53
SNF8-208ENST00000510195 ACOT6Q3I5F7 207 aaPredicted RBP18.35■□□□□ 0.53
SNF8-208ENST00000510195 PQLC2Q6ZP29 291 aa18.35■□□□□ 0.53
SNF8-208ENST00000510195 OTORQ9NRC9 128 aa18.35■□□□□ 0.53
SNF8-208ENST00000510195 MRPL16Q9NX20 251 aaKnown RBP18.35■□□□□ 0.53
SNF8-208ENST00000510195 CDK2AP2O75956 126 aa18.34■□□□□ 0.53
SNF8-208ENST00000510195 SPXQ9BT56 116 aa18.34■□□□□ 0.53
SNF8-208ENST00000510195 HHLA3Q9XRX5 114 aa18.34■□□□□ 0.53
SNF8-208ENST00000510195 CRYBA4P53673 196 aa18.33■□□□□ 0.52
SNF8-208ENST00000510195 FAM159AQ6UWV7 190 aa18.33■□□□□ 0.52
SNF8-208ENST00000510195 CMTM2Q8TAZ6 248 aa18.33■□□□□ 0.52
SNF8-208ENST00000510195 TRGV11A0A075B6L2 103 aa18.32■□□□□ 0.52
SNF8-208ENST00000510195 A0A1W2PPV4 95 aa18.32■□□□□ 0.52
SNF8-208ENST00000510195 SIVA1O15304 175 aa18.32■□□□□ 0.52
SNF8-208ENST00000510195 FHL2Q14192 279 aa18.32■□□□□ 0.52
SNF8-208ENST00000510195 MRPL23Q16540 153 aaKnown RBP18.32■□□□□ 0.52
SNF8-208ENST00000510195 TDRG1Q3Y452 100 aa18.32■□□□□ 0.52
SNF8-208ENST00000510195 IQCF2Q8IXL9 164 aa18.32■□□□□ 0.52
SNF8-208ENST00000510195 RASL10AQ92737 203 aa18.32■□□□□ 0.52
SNF8-208ENST00000510195 WFDC1Q9HC57 220 aa18.32■□□□□ 0.52
SNF8-208ENST00000510195 PGPA6NDG6 321 aa18.31■□□□□ 0.52
SNF8-208ENST00000510195 IGHV3-53P01767 116 aa18.31■□□□□ 0.52
SNF8-208ENST00000510195 MUC21Q5SSG8 566 aa18.31■□□□□ 0.52
SNF8-208ENST00000510195 HYLS1Q96M11 299 aa18.31■□□□□ 0.52
SNF8-208ENST00000510195 MDFICQ9P1T7 246 aa18.31■□□□□ 0.52
SNF8-208ENST00000510195 OR10G4Q8NGN3 311 aa18.29■□□□□ 0.52
SNF8-208ENST00000510195 SPATA12Q7Z6I5 190 aa18.28■□□□□ 0.52
SNF8-208ENST00000510195 C8orf49Q96NF6 230 aa18.28■□□□□ 0.52
SNF8-208ENST00000510195 BATF3Q9NR55 127 aa18.28■□□□□ 0.52
SNF8-208ENST00000510195 TRGV4A0A0C4DH28 118 aa18.27■□□□□ 0.52
SNF8-208ENST00000510195 NXPH4O95158 308 aa18.27■□□□□ 0.52
SNF8-208ENST00000510195 TMEM183BQ1AE95 376 aa18.27■□□□□ 0.52
SNF8-208ENST00000510195 NEGR1Q7Z3B1 354 aa18.27■□□□□ 0.52
SNF8-208ENST00000510195 TMEM183AQ8IXX5 376 aa18.27■□□□□ 0.52
SNF8-208ENST00000510195 ABCA13Q86UQ4 5058 aa18.26■□□□□ 0.51
SNF8-208ENST00000510195 LYPD5Q6UWN5 251 aa18.26■□□□□ 0.51
SNF8-208ENST00000510195 OR10G9Q8NGN4 311 aa18.26■□□□□ 0.51
SNF8-208ENST00000510195 OR10G7Q8NGN6 311 aa18.26■□□□□ 0.51
SNF8-208ENST00000510195 TRAV21A0A0B4J279 112 aa18.25■□□□□ 0.51
SNF8-208ENST00000510195 LINC00315P59091 139 aa18.25■□□□□ 0.51
SNF8-208ENST00000510195 RAB2AP61019 212 aa18.25■□□□□ 0.51
SNF8-208ENST00000510195 GOLT1AQ6ZVE7 132 aa18.25■□□□□ 0.51
SNF8-208ENST00000510195 OR2G3Q8NGZ4 309 aa18.25■□□□□ 0.51
SNF8-208ENST00000510195 SERTM2A0A1B0GWG4 89 aa18.24■□□□□ 0.51
SNF8-208ENST00000510195 K7EP13 123 aa18.24■□□□□ 0.51
SNF8-208ENST00000510195 ORM1P02763 201 aa18.24■□□□□ 0.51
SNF8-208ENST00000510195 ZNF479Q96JC4 524 aa18.24■□□□□ 0.51
SNF8-208ENST00000510195 ALG5Q9Y673 324 aa18.24■□□□□ 0.51
SNF8-208ENST00000510195 DNAH5Q8TE73 4624 aa18.23■□□□□ 0.51
SNF8-208ENST00000510195 EIF3GO75821 320 aaKnown RBP eCLIP18.23■□□□□ 0.51
SNF8-208ENST00000510195 KCNS1Q96KK3 526 aa18.23■□□□□ 0.51
SNF8-208ENST00000510195 PSMG3Q9BT73 122 aaPredicted RBP18.23■□□□□ 0.51
SNF8-208ENST00000510195 TREM1Q9NP99 234 aa18.23■□□□□ 0.51
SNF8-208ENST00000510195 RPH3ALQ9UNE2 315 aa18.23■□□□□ 0.51
SNF8-208ENST00000510195 TRAV4A0A0B4J268 109 aa18.22■□□□□ 0.51
SNF8-208ENST00000510195 K7EQD1 137 aa18.22■□□□□ 0.51
SNF8-208ENST00000510195 M0R2P5 195 aa18.22■□□□□ 0.51
SNF8-208ENST00000510195 SRIP30626 198 aa18.22■□□□□ 0.51
SNF8-208ENST00000510195 Q6ZRN7 208 aaPredicted RBP18.22■□□□□ 0.51
SNF8-208ENST00000510195 PCNPQ8WW12 178 aaKnown RBP18.22■□□□□ 0.51
SNF8-208ENST00000510195 NAGKQ9UJ70 344 aa18.22■□□□□ 0.51
SNF8-208ENST00000510195 TRAV9-2A0A087WT02 112 aa18.21■□□□□ 0.51
SNF8-208ENST00000510195 SFTA3P0C7M3 94 aa18.21■□□□□ 0.51
SNF8-208ENST00000510195 STAG3L2P0CL84 134 aa18.21■□□□□ 0.51
SNF8-208ENST00000510195 STAG3L3P0CL85 134 aa18.21■□□□□ 0.51
SNF8-208ENST00000510195 CDC34P49427 236 aaPredicted RBP18.21■□□□□ 0.51
SNF8-208ENST00000510195 SERF2P84101 59 aa18.21■□□□□ 0.51
SNF8-208ENST00000510195 SUN5Q8TC36 379 aa18.21■□□□□ 0.51
SNF8-208ENST00000510195 AQP10Q96PS8 301 aa18.21■□□□□ 0.51
SNF8-208ENST00000510195 APOBP04114 4563 aaKnown RBP18.21■□□□□ 0.51
SNF8-208ENST00000510195 IGHV3-16A0A0C4DH30 117 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms