RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 PSG3Q16557 428 aa10.63□□□□□ -0.71
HMGCL-208ENST00000509389 GOLT1AQ6ZVE7 132 aa10.63□□□□□ -0.71
HMGCL-208ENST00000509389 C11orf45Q8TAV5 145 aa10.63□□□□□ -0.71
HMGCL-208ENST00000509389 C20orf173Q96LM9 149 aa10.63□□□□□ -0.71
HMGCL-208ENST00000509389 C11orf68Q9H3H3 251 aaKnown RBP10.63□□□□□ -0.71
HMGCL-208ENST00000509389 PPP1R14DQ9NXH3 145 aa10.63□□□□□ -0.71
HMGCL-208ENST00000509389 CA1P00915 261 aaPredicted RBP10.62□□□□□ -0.71
HMGCL-208ENST00000509389 CSN1S1P47710 185 aa10.62□□□□□ -0.71
HMGCL-208ENST00000509389 IGFL4Q6B9Z1 124 aa10.62□□□□□ -0.71
HMGCL-208ENST00000509389 LGALS9CQ6DKI2 356 aa10.62□□□□□ -0.71
HMGCL-208ENST00000509389 FAM24BQ8N5W8 94 aa10.62□□□□□ -0.71
HMGCL-208ENST00000509389 RNF182Q8N6D2 247 aa10.62□□□□□ -0.71
HMGCL-208ENST00000509389 OCC1Q8TAD7 63 aa10.62□□□□□ -0.71
HMGCL-208ENST00000509389 ISOC2Q96AB3 205 aa10.62□□□□□ -0.71
HMGCL-208ENST00000509389 C16orf92Q96LL3 132 aa10.62□□□□□ -0.71
HMGCL-208ENST00000509389 AGRNO00468 2067 aa10.61□□□□□ -0.71
HMGCL-208ENST00000509389 C7orf77A4D0Y5 90 aa10.61□□□□□ -0.71
HMGCL-208ENST00000509389 PGPEP1LA6NFU8 196 aa10.61□□□□□ -0.71
HMGCL-208ENST00000509389 PRAC2D3DTV9 90 aa10.61□□□□□ -0.71
HMGCL-208ENST00000509389 K7EN84 100 aa10.61□□□□□ -0.71
HMGCL-208ENST00000509389 GCGP01275 180 aa10.61□□□□□ -0.71
HMGCL-208ENST00000509389 GNG4P50150 75 aa10.61□□□□□ -0.71
HMGCL-208ENST00000509389 RPL11P62913 178 aaKnown RBP10.61□□□□□ -0.71
HMGCL-208ENST00000509389 FLI1Q01543 452 aaPredicted RBP10.61□□□□□ -0.71
HMGCL-208ENST00000509389 C9orf47Q6ZRZ4 202 aa10.61□□□□□ -0.71
HMGCL-208ENST00000509389 DNAH10Q8IVF4 4471 aa10.61□□□□□ -0.71
HMGCL-208ENST00000509389 TRAV8-1A0A0A6YYK1 113 aa10.6□□□□□ -0.71
HMGCL-208ENST00000509389 TRAV34A0A0B4J273 112 aa10.6□□□□□ -0.71
HMGCL-208ENST00000509389 K7EQM0 130 aa10.6□□□□□ -0.71
HMGCL-208ENST00000509389 DEFB4AO15263 64 aa10.6□□□□□ -0.71
HMGCL-208ENST00000509389 UBE2G1P62253 170 aa10.6□□□□□ -0.71
HMGCL-208ENST00000509389 TMEM183AQ8IXX5 376 aa10.6□□□□□ -0.71
HMGCL-208ENST00000509389 TMEM242Q9NWH2 141 aa10.6□□□□□ -0.71
HMGCL-208ENST00000509389 IGKV2-40A0A087WW87 121 aaPredicted RBP10.59□□□□□ -0.71
HMGCL-208ENST00000509389 ZNF705FA8MVS1 300 aaPredicted RBP10.59□□□□□ -0.71
HMGCL-208ENST00000509389 IGKV2D-40P01614 121 aaPredicted RBP10.59□□□□□ -0.71
HMGCL-208ENST00000509389 ADIRFQ15847 76 aa10.59□□□□□ -0.71
HMGCL-208ENST00000509389 RPH3ALQ9UNE2 315 aa10.59□□□□□ -0.71
HMGCL-208ENST00000509389 PSG8Q9UQ74 426 aa10.59□□□□□ -0.71
HMGCL-208ENST00000509389 ZFP30Q9Y2G7 519 aa10.59□□□□□ -0.71
HMGCL-208ENST00000509389 NPIPB6E9PJ23 425 aa10.58□□□□□ -0.72
HMGCL-208ENST00000509389 M0R036 132 aa10.58□□□□□ -0.72
HMGCL-208ENST00000509389 FAM231DQ6ZW35 169 aa10.58□□□□□ -0.72
HMGCL-208ENST00000509389 BAGE2Q86Y30 109 aa10.58□□□□□ -0.72
HMGCL-208ENST00000509389 STHQ8IWL8 128 aa10.58□□□□□ -0.72
HMGCL-208ENST00000509389 ZNF492Q9P255 531 aa10.58□□□□□ -0.72
HMGCL-208ENST00000509389 VPS13DQ5THJ4 4388 aa10.57□□□□□ -0.72
HMGCL-208ENST00000509389 TRBV7-9A0A0J9YWB2 115 aa10.57□□□□□ -0.72
HMGCL-208ENST00000509389 A8MTW9 85 aa10.57□□□□□ -0.72
HMGCL-208ENST00000509389 SCO1O75880 301 aa10.57□□□□□ -0.72
HMGCL-208ENST00000509389 GIG44P09565 113 aaPredicted RBP10.57□□□□□ -0.72
HMGCL-208ENST00000509389 ID1P41134 155 aa10.57□□□□□ -0.72
HMGCL-208ENST00000509389 RNF212Q495C1 297 aa10.57□□□□□ -0.72
HMGCL-208ENST00000509389 FAM19A4Q96LR4 140 aa10.57□□□□□ -0.72
HMGCL-208ENST00000509389 VGLL1Q99990 258 aa10.57□□□□□ -0.72
HMGCL-208ENST00000509389 CTDSP1Q9GZU7 261 aa10.57□□□□□ -0.72
HMGCL-208ENST00000509389 LENEPQ9Y5L5 61 aa10.57□□□□□ -0.72
HMGCL-208ENST00000509389 C19orf71A6NCJ1 209 aa10.56□□□□□ -0.72
HMGCL-208ENST00000509389 TRPT1Q86TN4 253 aaKnown RBP10.56□□□□□ -0.72
HMGCL-208ENST00000509389 Q8NAQ8 132 aa10.56□□□□□ -0.72
HMGCL-208ENST00000509389 ZNF738Q8NE65 137 aa10.56□□□□□ -0.72
HMGCL-208ENST00000509389 OR8A1Q8NGG7 326 aa10.56□□□□□ -0.72
HMGCL-208ENST00000509389 SFRP2Q96HF1 295 aa10.56□□□□□ -0.72
HMGCL-208ENST00000509389 YPEL4Q96NS1 127 aa10.56□□□□□ -0.72
HMGCL-208ENST00000509389 OSTCQ9NRP0 149 aa10.56□□□□□ -0.72
HMGCL-208ENST00000509389 KNCNA6PVL3 124 aa10.55□□□□□ -0.72
HMGCL-208ENST00000509389 ZNF688P0C7X2 276 aa10.55□□□□□ -0.72
HMGCL-208ENST00000509389 SNRPD3P62318 126 aaKnown RBP10.55□□□□□ -0.72
HMGCL-208ENST00000509389 MORN3Q6PF18 240 aaPredicted RBP10.55□□□□□ -0.72
HMGCL-208ENST00000509389 PRNTQ86SH4 94 aa10.55□□□□□ -0.72
HMGCL-208ENST00000509389 ANAPC16Q96DE5 110 aa10.55□□□□□ -0.72
HMGCL-208ENST00000509389 SGK494Q96LW2 274 aa10.55□□□□□ -0.72
HMGCL-208ENST00000509389 ODF3Q96PU9 254 aa10.55□□□□□ -0.72
HMGCL-208ENST00000509389 AGPAT4-IT1Q9H0P7 198 aa10.55□□□□□ -0.72
HMGCL-208ENST00000509389 IGHV4-28A0A0C4DH34 117 aa10.54□□□□□ -0.72
HMGCL-208ENST00000509389 MT-ND4LP03901 98 aa10.54□□□□□ -0.72
HMGCL-208ENST00000509389 RBMY1A1P0DJD3 496 aaKnown RBP10.54□□□□□ -0.72
HMGCL-208ENST00000509389 RBMY1CP0DJD4 496 aa10.54□□□□□ -0.72
HMGCL-208ENST00000509389 TCTAP57738 103 aa10.54□□□□□ -0.72
HMGCL-208ENST00000509389 RBMY1FQ15415 496 aaKnown RBP10.54□□□□□ -0.72
HMGCL-208ENST00000509389 SAPCD1Q5SSQ6 148 aa10.54□□□□□ -0.72
HMGCL-208ENST00000509389 Q8TAT8 98 aa10.54□□□□□ -0.72
HMGCL-208ENST00000509389 ZC2HC1AQ96GY0 325 aa10.54□□□□□ -0.72
HMGCL-208ENST00000509389 RPS10P5Q9NQ39 176 aa10.54□□□□□ -0.72
HMGCL-208ENST00000509389 BIN3Q9NQY0 253 aa10.54□□□□□ -0.72
HMGCL-208ENST00000509389 APLNQ9ULZ1 77 aa10.54□□□□□ -0.72
HMGCL-208ENST00000509389 PPP1R2P9O14990 202 aa10.53□□□□□ -0.72
HMGCL-208ENST00000509389 CRISP2P16562 243 aa10.53□□□□□ -0.72
HMGCL-208ENST00000509389 ZNF138P52744 262 aa10.53□□□□□ -0.72
HMGCL-208ENST00000509389 OR5I1Q13606 314 aa10.53□□□□□ -0.72
HMGCL-208ENST00000509389 ACTL10Q5JWF8 245 aa10.53□□□□□ -0.72
HMGCL-208ENST00000509389 FOXI2Q6ZQN5 318 aa10.53□□□□□ -0.72
HMGCL-208ENST00000509389 CBLN2Q8IUK8 224 aa10.53□□□□□ -0.72
HMGCL-208ENST00000509389 NHLRC2Q8NBF2 726 aa10.53□□□□□ -0.72
HMGCL-208ENST00000509389 LINC00477Q96M19 166 aa10.53□□□□□ -0.72
HMGCL-208ENST00000509389 V9GYV3 84 aa10.53□□□□□ -0.72
HMGCL-208ENST00000509389 A0A0J9YX75 114 aa10.52□□□□□ -0.72
HMGCL-208ENST00000509389 IGLL5B9A064 214 aa10.52□□□□□ -0.72
HMGCL-208ENST00000509389 MIFP14174 115 aa10.52□□□□□ -0.72
HMGCL-208ENST00000509389 ERCC8Q13216 396 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms