RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 IGHG4P01861 327 aa8.89□□□□□ -0.99
PRPF40B-203ENST00000508736 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.89□□□□□ -0.99
PRPF40B-203ENST00000508736 ORMDL3Q8N138 153 aa8.89□□□□□ -0.99
PRPF40B-203ENST00000508736 USMG5Q96IX5 58 aa8.89□□□□□ -0.99
PRPF40B-203ENST00000508736 ST20Q9HBF5 79 aa8.89□□□□□ -0.99
PRPF40B-203ENST00000508736 MRPS16Q9Y3D3 137 aaKnown RBP8.89□□□□□ -0.99
PRPF40B-203ENST00000508736 U3KQK5 164 aa8.89□□□□□ -0.99
PRPF40B-203ENST00000508736 ITPR3Q14573 2671 aa8.89□□□□□ -0.99
PRPF40B-203ENST00000508736 SMAD7O15105 426 aaKnown RBP8.88□□□□□ -0.99
PRPF40B-203ENST00000508736 HLA-DMBP28068 263 aa8.88□□□□□ -0.99
PRPF40B-203ENST00000508736 PRELID3AQ96N28 172 aa8.88□□□□□ -0.99
PRPF40B-203ENST00000508736 OTOGQ6ZRI0 2925 aa8.87□□□□□ -0.99
PRPF40B-203ENST00000508736 TMEM213A2RRL7 107 aa8.87□□□□□ -0.99
PRPF40B-203ENST00000508736 CLPSL1A2RUU4 121 aa8.87□□□□□ -0.99
PRPF40B-203ENST00000508736 D6R8Y8 96 aa8.87□□□□□ -0.99
PRPF40B-203ENST00000508736 ORM1P02763 201 aa8.87□□□□□ -0.99
PRPF40B-203ENST00000508736 TRGV3P03979 118 aa8.87□□□□□ -0.99
PRPF40B-203ENST00000508736 IGLC6P0CF74 106 aa8.87□□□□□ -0.99
PRPF40B-203ENST00000508736 TSPOP30536 169 aa8.87□□□□□ -0.99
PRPF40B-203ENST00000508736 ZNF138P52744 262 aa8.87□□□□□ -0.99
PRPF40B-203ENST00000508736 TWIST1Q15672 202 aa8.87□□□□□ -0.99
PRPF40B-203ENST00000508736 DEFB112Q30KQ8 113 aa8.87□□□□□ -0.99
PRPF40B-203ENST00000508736 IGFL4Q6B9Z1 124 aa8.87□□□□□ -0.99
PRPF40B-203ENST00000508736 LAMTOR2Q9Y2Q5 125 aa8.87□□□□□ -0.99
PRPF40B-203ENST00000508736 CR1P17927 2039 aa8.87□□□□□ -0.99
PRPF40B-203ENST00000508736 CREBBPQ92793 2442 aa8.87□□□□□ -0.99
PRPF40B-203ENST00000508736 ZFHX3Q15911 3703 aa8.87□□□□□ -0.99
PRPF40B-203ENST00000508736 IGLV1-40P01703 118 aa8.87□□□□□ -0.99
PRPF40B-203ENST00000508736 IGLL1P15814 213 aa8.87□□□□□ -0.99
PRPF40B-203ENST00000508736 ZNF80P51504 273 aaPredicted RBP8.87□□□□□ -0.99
PRPF40B-203ENST00000508736 BLCAPP62952 87 aa8.87□□□□□ -0.99
PRPF40B-203ENST00000508736 MAJINQ3KP22 176 aa8.87□□□□□ -0.99
PRPF40B-203ENST00000508736 LINC01559Q495D7 138 aa8.87□□□□□ -0.99
PRPF40B-203ENST00000508736 TMEM78Q5T7P6 136 aa8.87□□□□□ -0.99
PRPF40B-203ENST00000508736 AKAP9Q99996 3911 aa8.86□□□□□ -0.99
PRPF40B-203ENST00000508736 HIST1H1AQ02539 215 aaPredicted RBP8.86□□□□□ -0.99
PRPF40B-203ENST00000508736 CFHR3Q02985 330 aa8.86□□□□□ -0.99
PRPF40B-203ENST00000508736 LINC00173Q6ZV60 143 aa8.86□□□□□ -0.99
PRPF40B-203ENST00000508736 SPATA12Q7Z6I5 190 aa8.86□□□□□ -0.99
PRPF40B-203ENST00000508736 AMN1Q8IY45 258 aa8.86□□□□□ -0.99
PRPF40B-203ENST00000508736 RNF182Q8N6D2 247 aa8.86□□□□□ -0.99
PRPF40B-203ENST00000508736 CNFNQ9BYD5 112 aa8.86□□□□□ -0.99
PRPF40B-203ENST00000508736 U3KQE9 123 aa8.86□□□□□ -0.99
PRPF40B-203ENST00000508736 CELSR1Q9NYQ6 3014 aa8.86□□□□□ -0.99
PRPF40B-203ENST00000508736 CSPG4Q6UVK1 2322 aa8.86□□□□□ -0.99
PRPF40B-203ENST00000508736 IGHV3-66A0A0C4DH42 116 aa8.85□□□□□ -0.99
PRPF40B-203ENST00000508736 PPBPP02775 128 aa8.85□□□□□ -0.99
PRPF40B-203ENST00000508736 CKS2P33552 79 aa8.85□□□□□ -0.99
PRPF40B-203ENST00000508736 ARL3P36405 182 aa8.85□□□□□ -0.99
PRPF40B-203ENST00000508736 ERCC8Q13216 396 aa8.85□□□□□ -0.99
PRPF40B-203ENST00000508736 MRPL51Q4U2R6 128 aaKnown RBP8.85□□□□□ -0.99
PRPF40B-203ENST00000508736 C8orf86Q6ZUL3 223 aa8.85□□□□□ -0.99
PRPF40B-203ENST00000508736 LINC00527Q9UJ94 153 aa8.85□□□□□ -0.99
PRPF40B-203ENST00000508736 ZANQ9Y493 2812 aa8.85□□□□□ -0.99
PRPF40B-203ENST00000508736 A0A0G2JLM5 398 aa8.85□□□□□ -0.99
PRPF40B-203ENST00000508736 TMEM89A2RUT3 159 aa8.85□□□□□ -0.99
PRPF40B-203ENST00000508736 PRAC2D3DTV9 90 aa8.85□□□□□ -0.99
PRPF40B-203ENST00000508736 ZNF25P17030 456 aaPredicted RBP8.85□□□□□ -0.99
PRPF40B-203ENST00000508736 IFI27P40305 119 aaPredicted RBP8.85□□□□□ -0.99
PRPF40B-203ENST00000508736 LINC01545Q5VT33 79 aa8.85□□□□□ -0.99
PRPF40B-203ENST00000508736 IL17RELQ6ZVW7 336 aa8.85□□□□□ -0.99
PRPF40B-203ENST00000508736 MS4A6AQ9H2W1 248 aa8.85□□□□□ -0.99
PRPF40B-203ENST00000508736 SIGLEC8Q9NYZ4 499 aa8.85□□□□□ -0.99
PRPF40B-203ENST00000508736 TIMM8BQ9Y5J9 83 aaPredicted RBP8.85□□□□□ -0.99
PRPF40B-203ENST00000508736 FLNAP21333 2647 aaKnown RBP8.84□□□□□ -0.99
PRPF40B-203ENST00000508736 ZNF469Q96JG9 3925 aaPredicted RBP8.84□□□□□ -0.99
PRPF40B-203ENST00000508736 NDUFA4O00483 81 aa8.84□□□□□ -0.99
PRPF40B-203ENST00000508736 IGHV4-59P01825 116 aa8.84□□□□□ -0.99
PRPF40B-203ENST00000508736 G0S2P27469 103 aa8.84□□□□□ -0.99
PRPF40B-203ENST00000508736 Q6YL49 198 aa8.84□□□□□ -0.99
PRPF40B-203ENST00000508736 ZNF747Q9BV97 191 aa8.84□□□□□ -0.99
PRPF40B-203ENST00000508736 VPREB3Q9UKI3 123 aa8.84□□□□□ -0.99
PRPF40B-203ENST00000508736 IGHV3OR16-13A0A075B7E8 117 aa8.83□□□□□ -1
PRPF40B-203ENST00000508736 IGHV3-74A0A0B4J1X5 117 aa8.83□□□□□ -1
PRPF40B-203ENST00000508736 LOC389332A0A1B0GUA5 103 aa8.83□□□□□ -1
PRPF40B-203ENST00000508736 ZNF207O43670 478 aaKnown RBP8.83□□□□□ -1
PRPF40B-203ENST00000508736 C9orf47Q6ZRZ4 202 aa8.83□□□□□ -1
PRPF40B-203ENST00000508736 Q6ZS46 218 aa8.83□□□□□ -1
PRPF40B-203ENST00000508736 C16orf92Q96LL3 132 aa8.83□□□□□ -1
PRPF40B-203ENST00000508736 IGHV3-49A0A0A0MS15 119 aa8.83□□□□□ -1
PRPF40B-203ENST00000508736 TRAV8-2A0A0B4J237 113 aa8.83□□□□□ -1
PRPF40B-203ENST00000508736 H0Y8G0 127 aa8.83□□□□□ -1
PRPF40B-203ENST00000508736 HBDP02042 147 aa8.83□□□□□ -1
PRPF40B-203ENST00000508736 GAGE1Q13065 139 aa8.83□□□□□ -1
PRPF40B-203ENST00000508736 SLC25A34Q6PIV7 304 aa8.83□□□□□ -1
PRPF40B-203ENST00000508736 TEX29Q8N6K0 151 aa8.83□□□□□ -1
PRPF40B-203ENST00000508736 GLMPQ8WWB7 406 aa8.83□□□□□ -1
PRPF40B-203ENST00000508736 AGPAT4-IT1Q9H0P7 198 aa8.83□□□□□ -1
PRPF40B-203ENST00000508736 MAP1LC3AQ9H492 121 aa8.83□□□□□ -1
PRPF40B-203ENST00000508736 PPP1R14DQ9NXH3 145 aa8.83□□□□□ -1
PRPF40B-203ENST00000508736 LENEPQ9Y5L5 61 aa8.83□□□□□ -1
PRPF40B-203ENST00000508736 MUC21A0A0G2JKD1 596 aa8.82□□□□□ -1
PRPF40B-203ENST00000508736 MUC21A0A140T8X8 626 aa8.82□□□□□ -1
PRPF40B-203ENST00000508736 PF4V1P10720 104 aa8.82□□□□□ -1
PRPF40B-203ENST00000508736 MUC21Q5SSG8 566 aa8.82□□□□□ -1
PRPF40B-203ENST00000508736 SMIM15Q7Z3B0 74 aa8.82□□□□□ -1
PRPF40B-203ENST00000508736 ACANP16112 2415 aa8.81□□□□□ -1
PRPF40B-203ENST00000508736 hDV102S1A0JD36 115 aa8.81□□□□□ -1
PRPF40B-203ENST00000508736 DLEU1O43261 78 aa8.81□□□□□ -1
PRPF40B-203ENST00000508736 TCF21O43680 179 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 400.6 ms