RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 CABIN1Q9Y6J0 2220 aa2.66□□□□□ -1.98
SMARCA5-202ENST00000508573 ERVK-7P63135 1459 aa2.66□□□□□ -1.98
SMARCA5-202ENST00000508573 GAPVD1Q14C86 1478 aa2.66□□□□□ -1.98
SMARCA5-202ENST00000508573 ARAP2Q8WZ64 1704 aa2.66□□□□□ -1.98
SMARCA5-202ENST00000508573 IGKV1D-42A0A075B6H8 117 aa2.66□□□□□ -1.98
SMARCA5-202ENST00000508573 IGHV1-24A0A0C4DH33 117 aa2.66□□□□□ -1.98
SMARCA5-202ENST00000508573 J3QLW9 94 aa2.66□□□□□ -1.98
SMARCA5-202ENST00000508573 K7EP34 96 aa2.66□□□□□ -1.98
SMARCA5-202ENST00000508573 SNCGO76070 127 aa2.66□□□□□ -1.98
SMARCA5-202ENST00000508573 IL5P05113 134 aa2.66□□□□□ -1.98
SMARCA5-202ENST00000508573 NMBP08949 121 aa2.66□□□□□ -1.98
SMARCA5-202ENST00000508573 SNCAP37840 140 aa2.66□□□□□ -1.98
SMARCA5-202ENST00000508573 ZNF816Q0VGE8 651 aaPredicted RBP2.66□□□□□ -1.98
SMARCA5-202ENST00000508573 PEA15Q15121 130 aa2.66□□□□□ -1.98
SMARCA5-202ENST00000508573 C1orf134Q5TEV5 83 aa2.66□□□□□ -1.98
SMARCA5-202ENST00000508573 LYPD6Q86Y78 171 aa2.66□□□□□ -1.98
SMARCA5-202ENST00000508573 C10orf82Q8WW14 230 aa2.66□□□□□ -1.98
SMARCA5-202ENST00000508573 SPTSSAQ969W0 71 aa2.66□□□□□ -1.98
SMARCA5-202ENST00000508573 TMEM242Q9NWH2 141 aa2.66□□□□□ -1.98
SMARCA5-202ENST00000508573 NHP2Q9NX24 153 aaKnown RBP2.66□□□□□ -1.98
SMARCA5-202ENST00000508573 MINOS1-NBL1R4GNA1 71 aa2.66□□□□□ -1.98
SMARCA5-202ENST00000508573 MCM3APO60318 1980 aa2.66□□□□□ -1.98
SMARCA5-202ENST00000508573 NYNRINQ9P2P1 1898 aaKnown RBP2.66□□□□□ -1.98
SMARCA5-202ENST00000508573 ABCA3Q99758 1704 aa2.65□□□□□ -1.98
SMARCA5-202ENST00000508573 ZFC3H1O60293 1989 aaKnown RBP2.65□□□□□ -1.98
SMARCA5-202ENST00000508573 TANC2Q9HCD6 1990 aa2.65□□□□□ -1.98
SMARCA5-202ENST00000508573 A0A1B0GU33 70 aa2.65□□□□□ -1.99
SMARCA5-202ENST00000508573 IQCJQ1A5X6 159 aa2.65□□□□□ -1.99
SMARCA5-202ENST00000508573 REG4Q9BYZ8 158 aa2.65□□□□□ -1.99
SMARCA5-202ENST00000508573 LY96Q9Y6Y9 160 aa2.65□□□□□ -1.99
SMARCA5-202ENST00000508573 USP54Q70EL1 1684 aa2.65□□□□□ -1.99
SMARCA5-202ENST00000508573 C10orf71Q711Q0 1435 aa2.65□□□□□ -1.99
SMARCA5-202ENST00000508573 ZSWIM8A7E2V4 1837 aa2.65□□□□□ -1.99
SMARCA5-202ENST00000508573 PSME4Q14997 1843 aa2.65□□□□□ -1.99
SMARCA5-202ENST00000508573 ADAMTS12P58397 1594 aa2.65□□□□□ -1.99
SMARCA5-202ENST00000508573 LRRIQ1Q96JM4 1722 aa2.65□□□□□ -1.99
SMARCA5-202ENST00000508573 KIDINS220Q9ULH0 1771 aa2.64□□□□□ -1.99
SMARCA5-202ENST00000508573 PTPRSQ13332 1948 aa2.64□□□□□ -1.99
SMARCA5-202ENST00000508573 ADAMTS9Q9P2N4 1935 aa2.64□□□□□ -1.99
SMARCA5-202ENST00000508573 TRAV14DV4A0A0A6YYC5 116 aa2.64□□□□□ -1.99
SMARCA5-202ENST00000508573 LOC107984156A0A0G2JMH3 177 aa2.64□□□□□ -1.99
SMARCA5-202ENST00000508573 C17orf112F2Z3M2 114 aa2.64□□□□□ -1.99
SMARCA5-202ENST00000508573 M0R233 179 aa2.64□□□□□ -1.99
SMARCA5-202ENST00000508573 GNGT2O14610 69 aa2.64□□□□□ -1.99
SMARCA5-202ENST00000508573 SSSCA1O60232 199 aa2.64□□□□□ -1.99
SMARCA5-202ENST00000508573 PROSCO94903 275 aa2.64□□□□□ -1.99
SMARCA5-202ENST00000508573 CRPP02741 224 aa2.64□□□□□ -1.99
SMARCA5-202ENST00000508573 PIRTP0C851 137 aa2.64□□□□□ -1.99
SMARCA5-202ENST00000508573 TRAPPC2P0DI81 140 aa2.64□□□□□ -1.99
SMARCA5-202ENST00000508573 TRAPPC2BP0DI82 140 aa2.64□□□□□ -1.99
SMARCA5-202ENST00000508573 SLC25A6P12236 298 aa2.64□□□□□ -1.99
SMARCA5-202ENST00000508573 LGALSLQ3ZCW2 172 aaPredicted RBP2.64□□□□□ -1.99
SMARCA5-202ENST00000508573 Q5BKY6 102 aa2.64□□□□□ -1.99
SMARCA5-202ENST00000508573 ARL17AQ8IVW1 177 aa2.64□□□□□ -1.99
SMARCA5-202ENST00000508573 LINC00269Q8N2A0 174 aa2.64□□□□□ -1.99
SMARCA5-202ENST00000508573 LINC00612Q8N6U2 182 aa2.64□□□□□ -1.99
SMARCA5-202ENST00000508573 KLF14Q8TD94 323 aaPredicted RBP2.64□□□□□ -1.99
SMARCA5-202ENST00000508573 TSKUQ8WUA8 353 aa2.64□□□□□ -1.99
SMARCA5-202ENST00000508573 Q96M85 177 aa2.64□□□□□ -1.99
SMARCA5-202ENST00000508573 UACAQ9BZF9 1416 aa2.64□□□□□ -1.99
SMARCA5-202ENST00000508573 PLXNA3P51805 1871 aa2.63□□□□□ -1.99
SMARCA5-202ENST00000508573 THOC2Q8NI27 1593 aaKnown RBP2.63□□□□□ -1.99
SMARCA5-202ENST00000508573 CLIP1P30622 1438 aa2.63□□□□□ -1.99
SMARCA5-202ENST00000508573 IGHV1-18A0A0C4DH31 117 aa2.63□□□□□ -1.99
SMARCA5-202ENST00000508573 ZNF705FA8MVS1 300 aaPredicted RBP2.63□□□□□ -1.99
SMARCA5-202ENST00000508573 C5orf67F2Z3F1 127 aa2.63□□□□□ -1.99
SMARCA5-202ENST00000508573 MGST1P10620 155 aaKnown RBP2.63□□□□□ -1.99
SMARCA5-202ENST00000508573 C12orf73Q69YU5 71 aa2.63□□□□□ -1.99
SMARCA5-202ENST00000508573 ALKAL2Q6UX46 152 aa2.63□□□□□ -1.99
SMARCA5-202ENST00000508573 C5orf38Q86SI9 138 aa2.63□□□□□ -1.99
SMARCA5-202ENST00000508573 C20orf166-AS1Q96NR2 134 aa2.63□□□□□ -1.99
SMARCA5-202ENST00000508573 CXCL16Q9H2A7 254 aa2.63□□□□□ -1.99
SMARCA5-202ENST00000508573 MYH1P12882 1939 aa2.63□□□□□ -1.99
SMARCA5-202ENST00000508573 GREB1Q4ZG55 1949 aa2.63□□□□□ -1.99
SMARCA5-202ENST00000508573 ZNF318Q5VUA4 2279 aa2.63□□□□□ -1.99
SMARCA5-202ENST00000508573 MYO9BQ13459 2157 aa2.63□□□□□ -1.99
SMARCA5-202ENST00000508573 HEATR5AQ86XA9 2040 aa2.63□□□□□ -1.99
SMARCA5-202ENST00000508573 UBE2L5PA0A1B0GUS4 154 aa2.62□□□□□ -1.99
SMARCA5-202ENST00000508573 UBL3O95164 117 aa2.62□□□□□ -1.99
SMARCA5-202ENST00000508573 SSR2P43308 183 aa2.62□□□□□ -1.99
SMARCA5-202ENST00000508573 RPL26P61254 145 aaKnown RBP2.62□□□□□ -1.99
SMARCA5-202ENST00000508573 UBE2L3P68036 154 aaKnown RBP2.62□□□□□ -1.99
SMARCA5-202ENST00000508573 KRTAP25-1Q3LHN0 102 aa2.62□□□□□ -1.99
SMARCA5-202ENST00000508573 Q6ZS52 159 aa2.62□□□□□ -1.99
SMARCA5-202ENST00000508573 LINC00301Q8NCQ3 95 aa2.62□□□□□ -1.99
SMARCA5-202ENST00000508573 PARP14Q460N5 1801 aa2.62□□□□□ -1.99
SMARCA5-202ENST00000508573 SCN1AP35498 2009 aa2.62□□□□□ -1.99
SMARCA5-202ENST00000508573 AGRNO00468 2067 aa2.62□□□□□ -1.99
SMARCA5-202ENST00000508573 SHANK3Q9BYB0 1731 aa2.62□□□□□ -1.99
SMARCA5-202ENST00000508573 MARF1Q9Y4F3 1742 aaKnown RBP2.62□□□□□ -1.99
SMARCA5-202ENST00000508573 NUP214P35658 2090 aaPredicted RBP2.61□□□□□ -1.99
SMARCA5-202ENST00000508573 POLA1P09884 1462 aaPredicted RBP2.61□□□□□ -1.99
SMARCA5-202ENST00000508573 IGLV4-69A0A075B6H9 119 aa2.61□□□□□ -1.99
SMARCA5-202ENST00000508573 hADV29S1A0JD25 119 aa2.61□□□□□ -1.99
SMARCA5-202ENST00000508573 IGLC7A0M8Q6 106 aa2.61□□□□□ -1.99
SMARCA5-202ENST00000508573 SFT2D2O95562 160 aa2.61□□□□□ -1.99
SMARCA5-202ENST00000508573 IL4P05112 153 aa2.61□□□□□ -1.99
SMARCA5-202ENST00000508573 CISD3P0C7P0 127 aa2.61□□□□□ -1.99
SMARCA5-202ENST00000508573 ATP5EP56381 51 aaPredicted RBP2.61□□□□□ -1.99
SMARCA5-202ENST00000508573 RBM3P98179 157 aaKnown RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms