RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 IBA57Q5T440 356 aaKnown RBP8.97□□□□□ -0.97
HMGCS1-205ENST00000508319 PAXXQ9BUH6 204 aa8.97□□□□□ -0.97
HMGCS1-205ENST00000508319 TP53TG3Q9ULZ0 132 aa8.97□□□□□ -0.97
HMGCS1-205ENST00000508319 A0A1W2PPQ1 181 aa8.96□□□□□ -0.98
HMGCS1-205ENST00000508319 INMT-MINDY4F8WBC2 141 aa8.96□□□□□ -0.98
HMGCS1-205ENST00000508319 LCE2CQ5TA81 110 aa8.96□□□□□ -0.98
HMGCS1-205ENST00000508319 ST6GAL2Q96JF0 529 aa8.96□□□□□ -0.98
HMGCS1-205ENST00000508319 ATP5SQ99766 215 aa8.96□□□□□ -0.98
HMGCS1-205ENST00000508319 IGHV1OR15-1A0A075B7D0 117 aa8.95□□□□□ -0.98
HMGCS1-205ENST00000508319 TRBV7-9A0A0J9YWB2 115 aa8.95□□□□□ -0.98
HMGCS1-205ENST00000508319 RGS13O14921 159 aa8.95□□□□□ -0.98
HMGCS1-205ENST00000508319 OR7C2O60412 319 aa8.95□□□□□ -0.98
HMGCS1-205ENST00000508319 CDK2AP2O75956 126 aa8.95□□□□□ -0.98
HMGCS1-205ENST00000508319 ZNF138P52744 262 aa8.95□□□□□ -0.98
HMGCS1-205ENST00000508319 CYCSP99999 105 aaKnown RBP8.95□□□□□ -0.98
HMGCS1-205ENST00000508319 PPP1R1CQ8WVI7 109 aa8.95□□□□□ -0.98
HMGCS1-205ENST00000508319 HSPB11Q9Y547 144 aa8.95□□□□□ -0.98
HMGCS1-205ENST00000508319 RBAKDNA6NC62 111 aa8.94□□□□□ -0.98
HMGCS1-205ENST00000508319 C17orf112F2Z3M2 114 aa8.94□□□□□ -0.98
HMGCS1-205ENST00000508319 UBE2L3P68036 154 aaKnown RBP8.94□□□□□ -0.98
HMGCS1-205ENST00000508319 MARVELD1Q9BSK0 173 aa8.94□□□□□ -0.98
HMGCS1-205ENST00000508319 MRPL16Q9NX20 251 aaKnown RBP8.94□□□□□ -0.98
HMGCS1-205ENST00000508319 MPC2O95563 127 aa8.93□□□□□ -0.98
HMGCS1-205ENST00000508319 BTF3P20290 206 aaKnown RBP8.93□□□□□ -0.98
HMGCS1-205ENST00000508319 RANP62826 216 aaKnown RBP8.93□□□□□ -0.98
HMGCS1-205ENST00000508319 ZNF266Q14584 549 aa8.93□□□□□ -0.98
HMGCS1-205ENST00000508319 FFAR4Q5NUL3 377 aa8.93□□□□□ -0.98
HMGCS1-205ENST00000508319 SPATA12Q7Z6I5 190 aa8.93□□□□□ -0.98
HMGCS1-205ENST00000508319 LYPD1Q8N2G4 141 aa8.93□□□□□ -0.98
HMGCS1-205ENST00000508319 ARPC5LQ9BPX5 153 aa8.93□□□□□ -0.98
HMGCS1-205ENST00000508319 PTTG2Q9NZH5 202 aa8.93□□□□□ -0.98
HMGCS1-205ENST00000508319 ICOSQ9Y6W8 199 aa8.93□□□□□ -0.98
HMGCS1-205ENST00000508319 EREGO14944 169 aa8.92□□□□□ -0.98
HMGCS1-205ENST00000508319 PAX4O43316 350 aa8.92□□□□□ -0.98
HMGCS1-205ENST00000508319 IGHV3-53P01767 116 aa8.92□□□□□ -0.98
HMGCS1-205ENST00000508319 PET100P0DJ07 73 aa8.92□□□□□ -0.98
HMGCS1-205ENST00000508319 CSN1S1P47710 185 aa8.92□□□□□ -0.98
HMGCS1-205ENST00000508319 LINC00315P59091 139 aa8.92□□□□□ -0.98
HMGCS1-205ENST00000508319 ZNF415Q09FC8 603 aa8.92□□□□□ -0.98
HMGCS1-205ENST00000508319 KHDC3LQ587J8 217 aa8.92□□□□□ -0.98
HMGCS1-205ENST00000508319 SMIM3Q9BZL3 60 aa8.92□□□□□ -0.98
HMGCS1-205ENST00000508319 MBD2Q9UBB5 411 aa8.92□□□□□ -0.98
HMGCS1-205ENST00000508319 DIRC3C9JPN6 131 aa8.91□□□□□ -0.98
HMGCS1-205ENST00000508319 SIVA1O15304 175 aa8.91□□□□□ -0.98
HMGCS1-205ENST00000508319 SSNA1O43805 119 aa8.91□□□□□ -0.98
HMGCS1-205ENST00000508319 EIF3GO75821 320 aaKnown RBP eCLIP8.91□□□□□ -0.98
HMGCS1-205ENST00000508319 CRYBA4P53673 196 aa8.91□□□□□ -0.98
HMGCS1-205ENST00000508319 KRTAP10-2P60368 255 aa8.91□□□□□ -0.98
HMGCS1-205ENST00000508319 MUC21Q5SSG8 566 aa8.91□□□□□ -0.98
HMGCS1-205ENST00000508319 Q6AWC8 147 aa8.91□□□□□ -0.98
HMGCS1-205ENST00000508319 Q6ZRN7 208 aaPredicted RBP8.91□□□□□ -0.98
HMGCS1-205ENST00000508319 MDFICQ9P1T7 246 aa8.91□□□□□ -0.98
HMGCS1-205ENST00000508319 PRO0255Q9UI72 69 aa8.91□□□□□ -0.98
HMGCS1-205ENST00000508319 NXPH4O95158 308 aa8.9□□□□□ -0.98
HMGCS1-205ENST00000508319 IFNA5P01569 189 aa8.9□□□□□ -0.98
HMGCS1-205ENST00000508319 RPL12P30050 165 aaKnown RBP8.9□□□□□ -0.98
HMGCS1-205ENST00000508319 TAS2R45P59539 299 aa8.9□□□□□ -0.98
HMGCS1-205ENST00000508319 FHL2Q14192 279 aa8.9□□□□□ -0.98
HMGCS1-205ENST00000508319 C8orf49Q96NF6 230 aa8.9□□□□□ -0.98
HMGCS1-205ENST00000508319 WFDC1Q9HC57 220 aa8.9□□□□□ -0.98
HMGCS1-205ENST00000508319 OTORQ9NRC9 128 aa8.9□□□□□ -0.98
HMGCS1-205ENST00000508319 LENEPQ9Y5L5 61 aa8.9□□□□□ -0.98
HMGCS1-205ENST00000508319 SLAQ13239 276 aa8.89□□□□□ -0.99
HMGCS1-205ENST00000508319 TMEM183BQ1AE95 376 aa8.89□□□□□ -0.99
HMGCS1-205ENST00000508319 TMEM183AQ8IXX5 376 aa8.89□□□□□ -0.99
HMGCS1-205ENST00000508319 MAPKAPK5-AS1Q8N8E1 139 aa8.89□□□□□ -0.99
HMGCS1-205ENST00000508319 SCGB1C1Q8TD33 95 aa8.89□□□□□ -0.99
HMGCS1-205ENST00000508319 TMED6Q8WW62 240 aa8.89□□□□□ -0.99
HMGCS1-205ENST00000508319 HHLA3Q9XRX5 114 aa8.89□□□□□ -0.99
HMGCS1-205ENST00000508319 SFTA3P0C7M3 94 aa8.88□□□□□ -0.99
HMGCS1-205ENST00000508319 SMCPP49901 116 aaPredicted RBP8.88□□□□□ -0.99
HMGCS1-205ENST00000508319 DEFA1P59665 94 aa8.88□□□□□ -0.99
HMGCS1-205ENST00000508319 DEFA3P59666 94 aa8.88□□□□□ -0.99
HMGCS1-205ENST00000508319 MRPL23Q16540 153 aaKnown RBP8.88□□□□□ -0.99
HMGCS1-205ENST00000508319 TDRG1Q3Y452 100 aa8.88□□□□□ -0.99
HMGCS1-205ENST00000508319 RASL10AQ92737 203 aa8.88□□□□□ -0.99
HMGCS1-205ENST00000508319 HYLS1Q96M11 299 aa8.88□□□□□ -0.99
HMGCS1-205ENST00000508319 TRGV11A0A075B6L2 103 aa8.87□□□□□ -0.99
HMGCS1-205ENST00000508319 RAB2AP61019 212 aa8.87□□□□□ -0.99
HMGCS1-205ENST00000508319 LYPD5Q6UWN5 251 aa8.87□□□□□ -0.99
HMGCS1-205ENST00000508319 FAM159AQ6UWV7 190 aa8.87□□□□□ -0.99
HMGCS1-205ENST00000508319 NEGR1Q7Z3B1 354 aa8.87□□□□□ -0.99
HMGCS1-205ENST00000508319 IQCF2Q8IXL9 164 aa8.87□□□□□ -0.99
HMGCS1-205ENST00000508319 OR10G4Q8NGN3 311 aa8.87□□□□□ -0.99
HMGCS1-205ENST00000508319 ZNF479Q96JC4 524 aa8.87□□□□□ -0.99
HMGCS1-205ENST00000508319 RPH3ALQ9UNE2 315 aa8.87□□□□□ -0.99
HMGCS1-205ENST00000508319 TRAV8-1A0A0A6YYK1 113 aa8.86□□□□□ -0.99
HMGCS1-205ENST00000508319 TRGV4A0A0C4DH28 118 aa8.86□□□□□ -0.99
HMGCS1-205ENST00000508319 TMEM238LA0A1B0GVL6 79 aa8.86□□□□□ -0.99
HMGCS1-205ENST00000508319 PGPA6NDG6 321 aa8.86□□□□□ -0.99
HMGCS1-205ENST00000508319 K7EQD1 137 aa8.86□□□□□ -0.99
HMGCS1-205ENST00000508319 ACOT6Q3I5F7 207 aaPredicted RBP8.86□□□□□ -0.99
HMGCS1-205ENST00000508319 PQLC2Q6ZP29 291 aa8.86□□□□□ -0.99
HMGCS1-205ENST00000508319 GOLT1AQ6ZVE7 132 aa8.86□□□□□ -0.99
HMGCS1-205ENST00000508319 CMTM2Q8TAZ6 248 aa8.86□□□□□ -0.99
HMGCS1-205ENST00000508319 SPXQ9BT56 116 aa8.86□□□□□ -0.99
HMGCS1-205ENST00000508319 NAGKQ9UJ70 344 aa8.86□□□□□ -0.99
HMGCS1-205ENST00000508319 IGHV3-16A0A0C4DH30 117 aa8.85□□□□□ -0.99
HMGCS1-205ENST00000508319 F6UZH7 168 aa8.85□□□□□ -0.99
HMGCS1-205ENST00000508319 HMGB3O15347 200 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms