RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 YPEL1O60688 119 aa5.36□□□□□ -1.55
PDGFRA-206ENST00000508170 NUP210LQ5VU65 1888 aa5.36□□□□□ -1.55
PDGFRA-206ENST00000508170 SOSTDC1Q6X4U4 206 aa5.36□□□□□ -1.55
PDGFRA-206ENST00000508170 DEC1Q9P2X7 70 aa5.36□□□□□ -1.55
PDGFRA-206ENST00000508170 CACFD1Q9UGQ2 172 aa5.36□□□□□ -1.55
PDGFRA-206ENST00000508170 NAP1L6A6NFF2 107 aa5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 IGHV3-11P01762 117 aa5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 CBLN1P23435 193 aa5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 CMC4P56277 68 aaPredicted RBP5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 SEC11AP67812 179 aa5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 MRPS36P82909 103 aaKnown RBP5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 C2orf66Q6UXQ4 117 aa5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 ORMDL3Q8N138 153 aa5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 NPBQ8NG41 125 aa5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 C7orf33Q8WU49 177 aa5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 SMIM4Q8WVI0 70 aa5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 AMELYQ99218 206 aa5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 PMCHL2Q9BQD1 86 aa5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 CHCHD5Q9BSY4 110 aa5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 CEP290O15078 2479 aa5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 NINQ8N4C6 2090 aa5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 SZT2Q5T011 3432 aa5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 HELZP42694 1942 aaKnown RBP5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 A8MWL6 223 aa5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 SSSCA1O60232 199 aa5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 FHL2Q14192 279 aa5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 BVES-AS1Q5T3Y7 98 aa5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 OR10AG1Q8NH19 301 aa5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 CAMK2N2Q96S95 79 aa5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 TTTY13Q9BZ97 58 aa5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 C8orf17Q9NRJ1 99 aa5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 TNFRSF19Q9NS68 423 aa5.35□□□□□ -1.55
PDGFRA-206ENST00000508170 SNRPGP15A8MWD9 76 aa5.34□□□□□ -1.55
PDGFRA-206ENST00000508170 PCBD1P61457 104 aa5.34□□□□□ -1.55
PDGFRA-206ENST00000508170 ZNF524Q96C55 264 aa5.34□□□□□ -1.55
PDGFRA-206ENST00000508170 WFDC6Q9BQY6 131 aa5.34□□□□□ -1.55
PDGFRA-206ENST00000508170 ABRACLQ9P1F3 81 aa5.34□□□□□ -1.55
PDGFRA-206ENST00000508170 CCL26Q9Y258 94 aa5.34□□□□□ -1.55
PDGFRA-206ENST00000508170 EYSQ5T1H1 3165 aa5.34□□□□□ -1.56
PDGFRA-206ENST00000508170 KANTRA0A1W2PQU2 76 aa5.33□□□□□ -1.56
PDGFRA-206ENST00000508170 TMEM235A6NFC5 223 aa5.33□□□□□ -1.56
PDGFRA-206ENST00000508170 IGHV3-13P01766 116 aa5.33□□□□□ -1.56
PDGFRA-206ENST00000508170 IL5P05113 134 aa5.33□□□□□ -1.56
PDGFRA-206ENST00000508170 BLCAPP62952 87 aa5.33□□□□□ -1.56
PDGFRA-206ENST00000508170 C11orf87Q6NUJ2 197 aa5.33□□□□□ -1.56
PDGFRA-206ENST00000508170 COMMD6Q7Z4G1 85 aa5.33□□□□□ -1.56
PDGFRA-206ENST00000508170 HMGN2P46Q86SG4 172 aa5.33□□□□□ -1.56
PDGFRA-206ENST00000508170 SBSPONQ8IVN8 264 aa5.33□□□□□ -1.56
PDGFRA-206ENST00000508170 IMMP2LQ96T52 175 aa5.33□□□□□ -1.56
PDGFRA-206ENST00000508170 RPS10P5Q9NQ39 176 aa5.33□□□□□ -1.56
PDGFRA-206ENST00000508170 COL6A3P12111 3177 aa5.33□□□□□ -1.56
PDGFRA-206ENST00000508170 FUSP35637 526 aaKnown RBP eCLIP5.33□□□□□ -1.56
PDGFRA-206ENST00000508170 NANOS2P60321 138 aaKnown RBP5.33□□□□□ -1.56
PDGFRA-206ENST00000508170 OR5AS1Q8N127 324 aa5.33□□□□□ -1.56
PDGFRA-206ENST00000508170 FGF13Q92913 245 aa5.33□□□□□ -1.56
PDGFRA-206ENST00000508170 PHLDA3Q9Y5J5 127 aa5.33□□□□□ -1.56
PDGFRA-206ENST00000508170 CGB3P0DN86 165 aa5.32□□□□□ -1.56
PDGFRA-206ENST00000508170 CGB7P0DN87 165 aa5.32□□□□□ -1.56
PDGFRA-206ENST00000508170 UBE2AP49459 152 aa5.32□□□□□ -1.56
PDGFRA-206ENST00000508170 LINC00310P59036 64 aa5.32□□□□□ -1.56
PDGFRA-206ENST00000508170 TSPEAR-AS2P59090 65 aa5.32□□□□□ -1.56
PDGFRA-206ENST00000508170 CIRBPQ14011 172 aaKnown RBP5.32□□□□□ -1.56
PDGFRA-206ENST00000508170 PATE2Q6UY27 113 aa5.32□□□□□ -1.56
PDGFRA-206ENST00000508170 ZNF414Q96IQ9 312 aa5.32□□□□□ -1.56
PDGFRA-206ENST00000508170 IGHV1OR15-9A0A0B4J2B8 117 aa5.32□□□□□ -1.56
PDGFRA-206ENST00000508170 A0A1W2PPM0 123 aa5.32□□□□□ -1.56
PDGFRA-206ENST00000508170 J3QLW9 94 aa5.32□□□□□ -1.56
PDGFRA-206ENST00000508170 TIMM17BO60830 172 aa5.32□□□□□ -1.56
PDGFRA-206ENST00000508170 DEFB103AP81534 67 aa5.32□□□□□ -1.56
PDGFRA-206ENST00000508170 FAM213BQ8TBF2 198 aa5.32□□□□□ -1.56
PDGFRA-206ENST00000508170 VGLL1Q99990 258 aa5.32□□□□□ -1.56
PDGFRA-206ENST00000508170 RABAC1Q9UI14 185 aa5.32□□□□□ -1.56
PDGFRA-206ENST00000508170 LTBP2Q14767 1821 aa5.32□□□□□ -1.56
PDGFRA-206ENST00000508170 EML6Q6ZMW3 1958 aa5.31□□□□□ -1.56
PDGFRA-206ENST00000508170 CCL16O15467 120 aa5.31□□□□□ -1.56
PDGFRA-206ENST00000508170 MIR17HGQ75NE6 70 aa5.31□□□□□ -1.56
PDGFRA-206ENST00000508170 KIF26AQ9ULI4 1882 aaPredicted RBP5.31□□□□□ -1.56
PDGFRA-206ENST00000508170 CACNA1GO43497 2377 aa5.31□□□□□ -1.56
PDGFRA-206ENST00000508170 TRAV1-2A0A0B4J238 106 aa5.31□□□□□ -1.56
PDGFRA-206ENST00000508170 CPSF4LA6NMK7 179 aaKnown RBP5.31□□□□□ -1.56
PDGFRA-206ENST00000508170 HMGN4O00479 90 aa5.31□□□□□ -1.56
PDGFRA-206ENST00000508170 SDCBPO00560 298 aaPredicted RBP5.31□□□□□ -1.56
PDGFRA-206ENST00000508170 IGHV3-23P01764 117 aa5.31□□□□□ -1.56
PDGFRA-206ENST00000508170 CD28P10747 220 aa5.31□□□□□ -1.56
PDGFRA-206ENST00000508170 PTHLHP12272 177 aa5.31□□□□□ -1.56
PDGFRA-206ENST00000508170 FAUP35544 74 aaKnown RBP5.31□□□□□ -1.56
PDGFRA-206ENST00000508170 SPATA45Q537H7 98 aa5.31□□□□□ -1.56
PDGFRA-206ENST00000508170 ADM2Q7Z4H4 148 aa5.31□□□□□ -1.56
PDGFRA-206ENST00000508170 MYO10Q9HD67 2058 aa5.31□□□□□ -1.56
PDGFRA-206ENST00000508170 PRUNE2Q8WUY3 3088 aa5.31□□□□□ -1.56
PDGFRA-206ENST00000508170 CHD7Q9P2D1 2997 aa5.3□□□□□ -1.56
PDGFRA-206ENST00000508170 NOTCH4Q99466 2003 aa5.3□□□□□ -1.56
PDGFRA-206ENST00000508170 TRAV14DV4A0A0A6YYC5 116 aa5.3□□□□□ -1.56
PDGFRA-206ENST00000508170 IGHV3-43A0A0B4J1X8 118 aa5.3□□□□□ -1.56
PDGFRA-206ENST00000508170 PINLYPA6NC86 204 aa5.3□□□□□ -1.56
PDGFRA-206ENST00000508170 ZNF736B4DX44 427 aaPredicted RBP5.3□□□□□ -1.56
PDGFRA-206ENST00000508170 J3QRE1 110 aa5.3□□□□□ -1.56
PDGFRA-206ENST00000508170 ZNF737O75373 536 aa5.3□□□□□ -1.56
PDGFRA-206ENST00000508170 ETDBQ3ZM63 59 aa5.3□□□□□ -1.56
PDGFRA-206ENST00000508170 MRPL51Q4U2R6 128 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms