RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 CD3EP07766 207 aa4.81□□□□□ -1.64
KDM3B-204ENST00000507996 RPL13AP40429 203 aaKnown RBP4.81□□□□□ -1.64
KDM3B-204ENST00000507996 RPS28P62857 69 aaKnown RBP4.81□□□□□ -1.64
KDM3B-204ENST00000507996 CIARTQ8N365 385 aaPredicted RBP4.81□□□□□ -1.64
KDM3B-204ENST00000507996 RFESDQ8TAC1 157 aa4.81□□□□□ -1.64
KDM3B-204ENST00000507996 HIST1H4GQ99525 98 aa4.81□□□□□ -1.64
KDM3B-204ENST00000507996 DYSFO75923 2080 aa4.81□□□□□ -1.64
KDM3B-204ENST00000507996 PGPA6NDG6 321 aa4.81□□□□□ -1.64
KDM3B-204ENST00000507996 COX7A2P2O60397 106 aa4.81□□□□□ -1.64
KDM3B-204ENST00000507996 RNASE2P10153 161 aaKnown RBP4.81□□□□□ -1.64
KDM3B-204ENST00000507996 ITLN2Q8WWU7 325 aaPredicted RBP4.81□□□□□ -1.64
KDM3B-204ENST00000507996 POLQO75417 2590 aa4.81□□□□□ -1.64
KDM3B-204ENST00000507996 LRBAP50851 2863 aa4.81□□□□□ -1.64
KDM3B-204ENST00000507996 CHD6Q8TD26 2715 aa4.81□□□□□ -1.64
KDM3B-204ENST00000507996 C19orf84I3L1E1 186 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 PSPNO60542 156 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 LINC00205P59089 165 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 CCL8P80075 99 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 MBNL2Q5VZF2 373 aaKnown RBP4.8□□□□□ -1.64
KDM3B-204ENST00000507996 BAALCQ8WXS3 180 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 TRGV9Q99603 122 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 SLC25A39Q9BZJ4 359 aaPredicted RBP4.8□□□□□ -1.64
KDM3B-204ENST00000507996 TIMM8BQ9Y5J9 83 aaPredicted RBP4.8□□□□□ -1.64
KDM3B-204ENST00000507996 PLCE1Q9P212 2302 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 TRBV7-7A0A0K0K1E9 115 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 M0R2P5 195 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 TFF1P04155 84 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 GP9P14770 177 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 PLNP26678 52 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 ZC2HC1BQ5TFG8 222 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 FAM53AQ6NSI3 398 aaPredicted RBP4.8□□□□□ -1.64
KDM3B-204ENST00000507996 TMEM75Q8N9X5 138 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 ODF3Q96PU9 254 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 S1PR3Q99500 378 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 TTTY13Q9BZ97 58 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 DYNLRB1Q9NP97 96 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 OTORQ9NRC9 128 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 DOPEY2Q9Y3R5 2298 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 E7EQL1 145 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 WNT9BO14905 357 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 CRLF1O75462 422 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 IGHV3-13P01766 116 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 PSMB2P49721 201 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 FBXL19-AS1Q494R0 122 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 MRPL51Q4U2R6 128 aaKnown RBP4.8□□□□□ -1.64
KDM3B-204ENST00000507996 OR11H6Q8NGC7 330 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 OR4C13Q8NGP0 309 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 CXXC4Q9H2H0 198 aa4.8□□□□□ -1.64
KDM3B-204ENST00000507996 TANC2Q9HCD6 1990 aa4.79□□□□□ -1.64
KDM3B-204ENST00000507996 IGKV1D-37A0A075B6S9 117 aa4.79□□□□□ -1.64
KDM3B-204ENST00000507996 SPINT2O43291 252 aa4.79□□□□□ -1.64
KDM3B-204ENST00000507996 TCL1BO95988 128 aa4.79□□□□□ -1.64
KDM3B-204ENST00000507996 CD7P09564 240 aa4.79□□□□□ -1.64
KDM3B-204ENST00000507996 TNFAIP6P98066 277 aaPredicted RBP4.79□□□□□ -1.64
KDM3B-204ENST00000507996 C3orf36Q3SXR2 165 aa4.79□□□□□ -1.64
KDM3B-204ENST00000507996 FAM201AQ5SY85 155 aa4.79□□□□□ -1.64
KDM3B-204ENST00000507996 COX8CQ7Z4L0 72 aa4.79□□□□□ -1.64
KDM3B-204ENST00000507996 GTSCR1Q86UQ5 136 aa4.79□□□□□ -1.64
KDM3B-204ENST00000507996 DEFB108BQ8NET1 73 aa4.79□□□□□ -1.64
KDM3B-204ENST00000507996 NXT2Q9NPJ8 142 aaKnown RBP4.79□□□□□ -1.64
KDM3B-204ENST00000507996 TRAV12-1A0A0B4J245 112 aa4.79□□□□□ -1.64
KDM3B-204ENST00000507996 FAM240AA0A1B0GVK7 77 aa4.79□□□□□ -1.64
KDM3B-204ENST00000507996 NCBP2LA6PVI3 153 aaKnown RBP4.79□□□□□ -1.64
KDM3B-204ENST00000507996 J3KT08 172 aa4.79□□□□□ -1.64
KDM3B-204ENST00000507996 UPK2O00526 184 aa4.79□□□□□ -1.64
KDM3B-204ENST00000507996 DUSP14O95147 198 aaKnown RBP4.79□□□□□ -1.64
KDM3B-204ENST00000507996 VKORC1L1Q8N0U8 176 aa4.79□□□□□ -1.64
KDM3B-204ENST00000507996 NUP37Q8NFH4 326 aa4.79□□□□□ -1.64
KDM3B-204ENST00000507996 NPIPB3Q92617 1050 aa4.79□□□□□ -1.64
KDM3B-204ENST00000507996 TMEM14CQ9P0S9 112 aa4.79□□□□□ -1.64
KDM3B-204ENST00000507996 KMT2BQ9UMN6 2715 aaPredicted RBP4.78□□□□□ -1.64
KDM3B-204ENST00000507996 IGHV3OR15-7A0A075B7D8 119 aa4.78□□□□□ -1.64
KDM3B-204ENST00000507996 LINC01548A6NM66 108 aa4.78□□□□□ -1.64
KDM3B-204ENST00000507996 K7EMI3 77 aa4.78□□□□□ -1.64
KDM3B-204ENST00000507996 IGHV1-46P01743 117 aa4.78□□□□□ -1.64
KDM3B-204ENST00000507996 SCGB1C2P0DMR2 95 aa4.78□□□□□ -1.64
KDM3B-204ENST00000507996 PVRIGQ6DKI7 326 aa4.78□□□□□ -1.64
KDM3B-204ENST00000507996 OR13A1Q8NGR1 328 aa4.78□□□□□ -1.64
KDM3B-204ENST00000507996 SRSF8Q9BRL6 282 aaKnown RBP4.78□□□□□ -1.64
KDM3B-204ENST00000507996 Q9H3A6 140 aa4.78□□□□□ -1.64
KDM3B-204ENST00000507996 IGLV3-9A0A075B6K5 115 aa4.78□□□□□ -1.64
KDM3B-204ENST00000507996 LOC389332A0A1B0GUA5 103 aa4.78□□□□□ -1.64
KDM3B-204ENST00000507996 TNFRSF6BO95407 300 aa4.78□□□□□ -1.64
KDM3B-204ENST00000507996 SRSF2Q01130 221 aaKnown RBP4.78□□□□□ -1.64
KDM3B-204ENST00000507996 HES1Q14469 280 aa4.78□□□□□ -1.64
KDM3B-204ENST00000507996 SRSF12Q8WXF0 261 aaKnown RBP4.78□□□□□ -1.64
KDM3B-204ENST00000507996 CCL17Q92583 94 aa4.78□□□□□ -1.64
KDM3B-204ENST00000507996 IMUPQ9GZP8 106 aa4.78□□□□□ -1.64
KDM3B-204ENST00000507996 ANKHD1Q8IWZ3 2542 aaKnown RBP4.78□□□□□ -1.64
KDM3B-204ENST00000507996 ABCA12Q86UK0 2595 aa4.78□□□□□ -1.64
KDM3B-204ENST00000507996 LINC01549A6NIU2 74 aa4.78□□□□□ -1.64
KDM3B-204ENST00000507996 DEFB108AA8MXU0 73 aa4.78□□□□□ -1.64
KDM3B-204ENST00000507996 LGALS1P09382 135 aaKnown RBP4.78□□□□□ -1.64
KDM3B-204ENST00000507996 LOXL3P58215 753 aa4.78□□□□□ -1.64
KDM3B-204ENST00000507996 ANXA2RQ3ZCQ2 193 aa4.78□□□□□ -1.64
KDM3B-204ENST00000507996 ZFP2Q6ZN57 461 aa4.78□□□□□ -1.64
KDM3B-204ENST00000507996 LINC00305Q7Z4B0 112 aa4.78□□□□□ -1.64
KDM3B-204ENST00000507996 UBTD1Q9HAC8 227 aa4.78□□□□□ -1.64
KDM3B-204ENST00000507996 CSPG4Q6UVK1 2322 aa4.77□□□□□ -1.65
KDM3B-204ENST00000507996 WNK2Q9Y3S1 2297 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms