RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 A0A1W2PQL4 384 aaPredicted RBP2.89□□□□□ -1.95
HERC4-213ENST00000506515 DAPL1A0PJW8 107 aa2.89□□□□□ -1.95
HERC4-213ENST00000506515 TMEM189A5PLL7 270 aa2.89□□□□□ -1.95
HERC4-213ENST00000506515 A8MWP6 167 aa2.89□□□□□ -1.95
HERC4-213ENST00000506515 IGKV1D-12P01611 117 aa2.89□□□□□ -1.95
HERC4-213ENST00000506515 PTHLHP12272 177 aa2.89□□□□□ -1.95
HERC4-213ENST00000506515 DEFA4P12838 97 aa2.89□□□□□ -1.95
HERC4-213ENST00000506515 RBM11P57052 281 aaKnown RBP2.89□□□□□ -1.95
HERC4-213ENST00000506515 TRAM1Q15629 374 aa2.89□□□□□ -1.95
HERC4-213ENST00000506515 CCDC58Q4VC31 144 aa2.89□□□□□ -1.95
HERC4-213ENST00000506515 PYDC2Q56P42 97 aa2.89□□□□□ -1.95
HERC4-213ENST00000506515 ZFP82Q8N141 532 aa2.89□□□□□ -1.95
HERC4-213ENST00000506515 ACBD7Q8N6N7 88 aa2.89□□□□□ -1.95
HERC4-213ENST00000506515 OR5D18Q8NGL1 313 aa2.89□□□□□ -1.95
HERC4-213ENST00000506515 OR5AK2Q8NH90 309 aa2.89□□□□□ -1.95
HERC4-213ENST00000506515 NIPSNAP1Q9BPW8 284 aa2.89□□□□□ -1.95
HERC4-213ENST00000506515 FAM103A1Q9BTL3 118 aaKnown RBP2.89□□□□□ -1.95
HERC4-213ENST00000506515 IFT46Q9NQC8 304 aa2.89□□□□□ -1.95
HERC4-213ENST00000506515 DNAH2Q9P225 4427 aa2.88□□□□□ -1.95
HERC4-213ENST00000506515 DEFB131BA0A096LNP1 70 aa2.88□□□□□ -1.95
HERC4-213ENST00000506515 IGHV3-43A0A0B4J1X8 118 aa2.88□□□□□ -1.95
HERC4-213ENST00000506515 LINC00854A0A1B0GVQ3 168 aa2.88□□□□□ -1.95
HERC4-213ENST00000506515 SMIM9A6NGZ8 99 aa2.88□□□□□ -1.95
HERC4-213ENST00000506515 GEMIN2O14893 280 aaKnown RBP2.88□□□□□ -1.95
HERC4-213ENST00000506515 UBBP0CG47 229 aa2.88□□□□□ -1.95
HERC4-213ENST00000506515 HLA-DMBP28068 263 aa2.88□□□□□ -1.95
HERC4-213ENST00000506515 EIF2B2P49770 351 aaKnown RBP2.88□□□□□ -1.95
HERC4-213ENST00000506515 TSPAN5P62079 268 aa2.88□□□□□ -1.95
HERC4-213ENST00000506515 MRPS15P82914 257 aaKnown RBP2.88□□□□□ -1.95
HERC4-213ENST00000506515 AMMECR1LQ6DCA0 310 aa2.88□□□□□ -1.95
HERC4-213ENST00000506515 C15orf53Q8NAA6 179 aa2.88□□□□□ -1.95
HERC4-213ENST00000506515 OR4K15Q8NH41 348 aa2.88□□□□□ -1.95
HERC4-213ENST00000506515 CASTOR1Q8WTX7 329 aa2.88□□□□□ -1.95
HERC4-213ENST00000506515 ZNF230Q9UIE0 474 aaPredicted RBP2.88□□□□□ -1.95
HERC4-213ENST00000506515 PRELID3BQ9Y3B1 194 aa2.88□□□□□ -1.95
HERC4-213ENST00000506515 FAT2Q9NYQ8 4349 aa2.87□□□□□ -1.95
HERC4-213ENST00000506515 PKD1P98161 4303 aa2.87□□□□□ -1.95
HERC4-213ENST00000506515 IGHV3-21A0A0B4J1V1 117 aa2.87□□□□□ -1.95
HERC4-213ENST00000506515 TRAV2A0A0B4J234 112 aa2.87□□□□□ -1.95
HERC4-213ENST00000506515 PGPA6NDG6 321 aa2.87□□□□□ -1.95
HERC4-213ENST00000506515 M0QXV9 152 aa2.87□□□□□ -1.95
HERC4-213ENST00000506515 TGOLN2O43493 480 aa2.87□□□□□ -1.95
HERC4-213ENST00000506515 PDCD6O75340 191 aa2.87□□□□□ -1.95
HERC4-213ENST00000506515 IFNA5P01569 189 aa2.87□□□□□ -1.95
HERC4-213ENST00000506515 REG1AP05451 166 aa2.87□□□□□ -1.95
HERC4-213ENST00000506515 SPART-AS1P0CW21 52 aa2.87□□□□□ -1.95
HERC4-213ENST00000506515 SAA2P0DJI9 122 aaPredicted RBP2.87□□□□□ -1.95
HERC4-213ENST00000506515 S100A2P29034 98 aa2.87□□□□□ -1.95
HERC4-213ENST00000506515 AP2S1P53680 142 aaPredicted RBP2.87□□□□□ -1.95
HERC4-213ENST00000506515 PIGYQ3MUY2 71 aa2.87□□□□□ -1.95
HERC4-213ENST00000506515 ACOT12Q8WYK0 555 aa2.87□□□□□ -1.95
HERC4-213ENST00000506515 ABHD14BQ96IU4 210 aa2.87□□□□□ -1.95
HERC4-213ENST00000506515 GABARAPL1Q9H0R8 117 aa2.87□□□□□ -1.95
HERC4-213ENST00000506515 TMEM14BQ9NUH8 114 aa2.87□□□□□ -1.95
HERC4-213ENST00000506515 RBM7Q9Y580 266 aaKnown RBP2.87□□□□□ -1.95
HERC4-213ENST00000506515 HSPG2P98160 4391 aa2.87□□□□□ -1.95
HERC4-213ENST00000506515 DNAH5Q8TE73 4624 aa2.86□□□□□ -1.95
HERC4-213ENST00000506515 TRAV8-3A0A0A6YYJ7 113 aa2.86□□□□□ -1.95
HERC4-213ENST00000506515 A0A0B4J2C4 111 aa2.86□□□□□ -1.95
HERC4-213ENST00000506515 IRGMA1A4Y4 181 aa2.86□□□□□ -1.95
HERC4-213ENST00000506515 TMEM213A2RRL7 107 aa2.86□□□□□ -1.95
HERC4-213ENST00000506515 OR4C45A6NMZ5 311 aa2.86□□□□□ -1.95
HERC4-213ENST00000506515 G3V2T6 193 aa2.86□□□□□ -1.95
HERC4-213ENST00000506515 J3QLW9 94 aa2.86□□□□□ -1.95
HERC4-213ENST00000506515 M0R2N4 97 aa2.86□□□□□ -1.95
HERC4-213ENST00000506515 NDUFA4O00483 81 aa2.86□□□□□ -1.95
HERC4-213ENST00000506515 PPP1CCP36873 323 aaKnown RBP2.86□□□□□ -1.95
HERC4-213ENST00000506515 CCL18P55774 89 aa2.86□□□□□ -1.95
HERC4-213ENST00000506515 ARPC4P59998 168 aa2.86□□□□□ -1.95
HERC4-213ENST00000506515 CDK10Q15131 360 aa2.86□□□□□ -1.95
HERC4-213ENST00000506515 HMGN3Q15651 99 aa2.86□□□□□ -1.95
HERC4-213ENST00000506515 PSG3Q16557 428 aa2.86□□□□□ -1.95
HERC4-213ENST00000506515 KLK9Q2XQG4 91 aa2.86□□□□□ -1.95
HERC4-213ENST00000506515 LGALSLQ3ZCW2 172 aaPredicted RBP2.86□□□□□ -1.95
HERC4-213ENST00000506515 HSP90B2PQ58FF3 399 aa2.86□□□□□ -1.95
HERC4-213ENST00000506515 RPL22L1Q6P5R6 122 aaKnown RBP2.86□□□□□ -1.95
HERC4-213ENST00000506515 AHSA2Q719I0 299 aa2.86□□□□□ -1.95
HERC4-213ENST00000506515 OR10J5Q8NHC4 309 aa2.86□□□□□ -1.95
HERC4-213ENST00000506515 TBX5Q99593 518 aa2.86□□□□□ -1.95
HERC4-213ENST00000506515 GINS3Q9BRX5 216 aa2.86□□□□□ -1.95
HERC4-213ENST00000506515 DCUN1D5Q9BTE7 237 aa2.86□□□□□ -1.95
HERC4-213ENST00000506515 OR51E2Q9H255 320 aa2.86□□□□□ -1.95
HERC4-213ENST00000506515 SLC2A9Q9NRM0 540 aa2.86□□□□□ -1.95
HERC4-213ENST00000506515 PLEKHJ1Q9NW61 149 aa2.86□□□□□ -1.95
HERC4-213ENST00000506515 KLK9Q9UKQ9 250 aa2.86□□□□□ -1.95
HERC4-213ENST00000506515 PUS1Q9Y606 427 aaKnown RBP eCLIP2.86□□□□□ -1.95
HERC4-213ENST00000506515 TRAV14DV4A0A0A6YYC5 116 aa2.85□□□□□ -1.95
HERC4-213ENST00000506515 A8MWP4 228 aa2.85□□□□□ -1.95
HERC4-213ENST00000506515 HSBP1L1C9JCN9 74 aa2.85□□□□□ -1.95
HERC4-213ENST00000506515 CRTAPO75718 401 aaPredicted RBP2.85□□□□□ -1.95
HERC4-213ENST00000506515 IGKV1-16P04430 117 aa2.85□□□□□ -1.95
HERC4-213ENST00000506515 CTXN2P0C2S0 81 aa2.85□□□□□ -1.95
HERC4-213ENST00000506515 PSMD7P51665 324 aa2.85□□□□□ -1.95
HERC4-213ENST00000506515 HBG1P69891 147 aa2.85□□□□□ -1.95
HERC4-213ENST00000506515 HBG2P69892 147 aa2.85□□□□□ -1.95
HERC4-213ENST00000506515 BAXQ07812 192 aa2.85□□□□□ -1.95
HERC4-213ENST00000506515 KRTAP25-1Q3LHN0 102 aa2.85□□□□□ -1.95
HERC4-213ENST00000506515 GLIPR1L1Q6UWM5 242 aa2.85□□□□□ -1.95
HERC4-213ENST00000506515 C10orf67Q8IYJ2 551 aa2.85□□□□□ -1.95
HERC4-213ENST00000506515 DEFB107AQ8IZN7 70 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms