RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 IGHV3OR16-10A0A075B7F0 116 aa4.38□□□□□ -1.71
SCLT1-207ENST00000506233 IGHV7-4-1A0A0J9YVY3 117 aa4.38□□□□□ -1.71
SCLT1-207ENST00000506233 APOA2P02652 100 aa4.38□□□□□ -1.71
SCLT1-207ENST00000506233 CTRLP40313 264 aa4.38□□□□□ -1.71
SCLT1-207ENST00000506233 GPR6P46095 362 aaPredicted RBP4.38□□□□□ -1.71
SCLT1-207ENST00000506233 MEOX2P50222 304 aa4.38□□□□□ -1.71
SCLT1-207ENST00000506233 DEFB1P60022 68 aa4.38□□□□□ -1.71
SCLT1-207ENST00000506233 C5orf47Q569G3 176 aa4.38□□□□□ -1.71
SCLT1-207ENST00000506233 ARPC1AQ92747 370 aa4.38□□□□□ -1.71
SCLT1-207ENST00000506233 VGLL1Q99990 258 aa4.38□□□□□ -1.71
SCLT1-207ENST00000506233 SAV1Q9H4B6 383 aaPredicted RBP4.38□□□□□ -1.71
SCLT1-207ENST00000506233 ZNF705FA8MVS1 300 aaPredicted RBP4.37□□□□□ -1.71
SCLT1-207ENST00000506233 PPP5D1E7EU14 171 aa4.37□□□□□ -1.71
SCLT1-207ENST00000506233 M0R3E3 92 aa4.37□□□□□ -1.71
SCLT1-207ENST00000506233 PEX7O00628 323 aa4.37□□□□□ -1.71
SCLT1-207ENST00000506233 GALR1P47211 349 aa4.37□□□□□ -1.71
SCLT1-207ENST00000506233 FAM106AQ4KMX7 169 aa4.37□□□□□ -1.71
SCLT1-207ENST00000506233 TOMM20LQ6UXN7 152 aa4.37□□□□□ -1.71
SCLT1-207ENST00000506233 FAM104AQ969W3 186 aa4.37□□□□□ -1.71
SCLT1-207ENST00000506233 COMMD5Q9GZQ3 224 aa4.37□□□□□ -1.71
SCLT1-207ENST00000506233 Q9H3A6 140 aa4.37□□□□□ -1.71
SCLT1-207ENST00000506233 U3KQK5 164 aa4.37□□□□□ -1.71
SCLT1-207ENST00000506233 GAGE12JA6NER3 117 aa4.37□□□□□ -1.71
SCLT1-207ENST00000506233 ERVFC1-1P60608 527 aa4.37□□□□□ -1.71
SCLT1-207ENST00000506233 MMDQ15546 238 aa4.37□□□□□ -1.71
SCLT1-207ENST00000506233 C10orf113Q5VZT2 155 aa4.37□□□□□ -1.71
SCLT1-207ENST00000506233 RNF185Q96GF1 192 aa4.37□□□□□ -1.71
SCLT1-207ENST00000506233 TXNDC17Q9BRA2 123 aa4.37□□□□□ -1.71
SCLT1-207ENST00000506233 OSTCQ9NRP0 149 aa4.37□□□□□ -1.71
SCLT1-207ENST00000506233 OR2T8A6NH00 312 aa4.37□□□□□ -1.71
SCLT1-207ENST00000506233 ENSAO43768 121 aaKnown RBP4.37□□□□□ -1.71
SCLT1-207ENST00000506233 OR2T10Q8NGZ9 312 aa4.37□□□□□ -1.71
SCLT1-207ENST00000506233 CNFNQ9BYD5 112 aa4.37□□□□□ -1.71
SCLT1-207ENST00000506233 IGLV5-52A0A0A0MRZ9 124 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.36□□□□□ -1.71
SCLT1-207ENST00000506233 H7BYZ3 331 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 M0R036 132 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 PPP1R2P9O14990 202 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 TGOLN2O43493 480 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 CDK2AP2O75956 126 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 IGLC6P0CF74 106 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 CBLN1P23435 193 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 ADIRFQ15847 76 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 VMA21Q3ZAQ7 101 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 TMEM75Q8N9X5 138 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 ZNF331Q9NQX6 463 aaPredicted RBP4.36□□□□□ -1.71
SCLT1-207ENST00000506233 LINC00527Q9UJ94 153 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 ALMS1Q8TCU4 4167 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 DNAH8Q96JB1 4490 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 IGLV2-18A0A075B6J9 118 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 IGKV3D-20A0A0C4DH25 116 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 RNASE11Q8TAA1 199 aaKnown RBP4.36□□□□□ -1.71
SCLT1-207ENST00000506233 TMEM190Q8WZ59 177 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 PAXXQ9BUH6 204 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 FAT2Q9NYQ8 4349 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 NBEAP1P0C6P0 100 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 RBMY1A1P0DJD3 496 aaKnown RBP4.36□□□□□ -1.71
SCLT1-207ENST00000506233 RBMY1CP0DJD4 496 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 PLA2G2AP14555 144 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 AMTP48728 403 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 RPL19P84098 196 aaKnown RBP4.36□□□□□ -1.71
SCLT1-207ENST00000506233 LAGE3Q14657 143 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 RBMY1FQ15415 496 aaKnown RBP4.36□□□□□ -1.71
SCLT1-207ENST00000506233 VN1R17PQ8TDU5 208 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 DCANP1Q8TF63 244 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 ZNF492Q9P255 531 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 TP73-AS1Q9UF72 201 aa4.36□□□□□ -1.71
SCLT1-207ENST00000506233 IGHV3OR16-8A0A075B7F1 116 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 TRAV40A0A0B4J280 105 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 C2orf70A6NJV1 201 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 MSMBP08118 114 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 Q0VG73 95 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 VAMP3Q15836 100 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 C15orf32Q32M92 178 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 RNF182Q8N6D2 247 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 OR5T1Q8NG75 326 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 SMIM12Q96EX1 92 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 C12orf57Q99622 126 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 CCL19Q99731 98 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 IGHV4-59P01825 116 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 LINC00315P59091 139 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 TAS2R60P59551 318 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 LOXL1Q08397 574 aaPredicted RBP4.35□□□□□ -1.71
SCLT1-207ENST00000506233 DEFB112Q30KQ8 113 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 GNB4Q9HAV0 340 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 DNAH6Q9C0G6 4158 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 DNAH11Q96DT5 4516 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 A0A1W2PS18 150 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 GRIFINA4D1Z8 144 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 A8MTW9 85 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 GATA1P15976 413 aaPredicted RBP4.35□□□□□ -1.71
SCLT1-207ENST00000506233 RPL35AP18077 110 aaKnown RBP4.35□□□□□ -1.71
SCLT1-207ENST00000506233 ORM2P19652 201 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 CEBPGP53567 150 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 ERHP84090 104 aaKnown RBP4.35□□□□□ -1.71
SCLT1-207ENST00000506233 ZNF493Q6ZR52 646 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 LINC00173Q6ZV60 143 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 ZNF664Q8N3J9 261 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 POM121L12Q8N7R1 296 aa4.35□□□□□ -1.71
SCLT1-207ENST00000506233 GNB1LQ9BYB4 327 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms