RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 TMED6Q8WW62 240 aa12.61□□□□□ -0.39
SMN1-204ENST00000506163 LINC00467Q9BRT7 94 aa12.61□□□□□ -0.39
SMN1-204ENST00000506163 KANTRA0A1W2PQU2 76 aa12.6□□□□□ -0.39
SMN1-204ENST00000506163 IGLV2-11P01706 119 aa12.6□□□□□ -0.39
SMN1-204ENST00000506163 TCRAP04437 139 aa12.6□□□□□ -0.39
SMN1-204ENST00000506163 SEC11BP0C7V7 166 aa12.6□□□□□ -0.39
SMN1-204ENST00000506163 IQCF2Q8IXL9 164 aa12.6□□□□□ -0.39
SMN1-204ENST00000506163 C5orf17Q8NAS9 161 aa12.6□□□□□ -0.39
SMN1-204ENST00000506163 LENEPQ9Y5L5 61 aa12.6□□□□□ -0.39
SMN1-204ENST00000506163 A0A1B0GVG6 124 aa12.59□□□□□ -0.39
SMN1-204ENST00000506163 A0A1W2PRE2 83 aa12.59□□□□□ -0.39
SMN1-204ENST00000506163 MAP1LC3B2A6NCE7 125 aa12.59□□□□□ -0.39
SMN1-204ENST00000506163 TCTAP57738 103 aa12.59□□□□□ -0.39
SMN1-204ENST00000506163 UBE2G2P60604 165 aa12.59□□□□□ -0.39
SMN1-204ENST00000506163 LGALS9CQ6DKI2 356 aa12.59□□□□□ -0.39
SMN1-204ENST00000506163 CCDC28AQ8IWP9 274 aa12.59□□□□□ -0.39
SMN1-204ENST00000506163 LINC00612Q8N6U2 182 aa12.59□□□□□ -0.39
SMN1-204ENST00000506163 MAP1LC3BQ9GZQ8 125 aa12.59□□□□□ -0.39
SMN1-204ENST00000506163 GSN-AS1Q9NRJ2 163 aa12.59□□□□□ -0.39
SMN1-204ENST00000506163 EPDR1Q9UM22 224 aa12.59□□□□□ -0.39
SMN1-204ENST00000506163 ANXA2RQ3ZCQ2 193 aa12.58□□□□□ -0.4
SMN1-204ENST00000506163 Q6AWC8 147 aa12.58□□□□□ -0.4
SMN1-204ENST00000506163 EIF4E3Q8N5X7 224 aaKnown RBP12.58□□□□□ -0.4
SMN1-204ENST00000506163 IGHV1OR15-1A0A075B7D0 117 aa12.57□□□□□ -0.4
SMN1-204ENST00000506163 FAM74A7A6NL05 159 aa12.57□□□□□ -0.4
SMN1-204ENST00000506163 C1QBP02746 253 aa12.57□□□□□ -0.4
SMN1-204ENST00000506163 LINC00479Q96M42 142 aa12.57□□□□□ -0.4
SMN1-204ENST00000506163 KLF12Q9Y4X4 402 aa12.57□□□□□ -0.4
SMN1-204ENST00000506163 CBY3A6NI87 242 aa12.56□□□□□ -0.4
SMN1-204ENST00000506163 RGS13O14921 159 aa12.56□□□□□ -0.4
SMN1-204ENST00000506163 PFDN1O60925 122 aa12.56□□□□□ -0.4
SMN1-204ENST00000506163 DAZ2Q13117 558 aaKnown RBP12.56□□□□□ -0.4
SMN1-204ENST00000506163 MUC21Q5SSG8 566 aa12.56□□□□□ -0.4
SMN1-204ENST00000506163 STOML3Q8TAV4 291 aa12.56□□□□□ -0.4
SMN1-204ENST00000506163 F6UZH7 168 aa12.55□□□□□ -0.4
SMN1-204ENST00000506163 Q6ZTI0 123 aa12.55□□□□□ -0.4
SMN1-204ENST00000506163 FAM213BQ8TBF2 198 aa12.55□□□□□ -0.4
SMN1-204ENST00000506163 MBD3L1Q8WWY6 194 aa12.55□□□□□ -0.4
SMN1-204ENST00000506163 C8orf49Q96NF6 230 aa12.55□□□□□ -0.4
SMN1-204ENST00000506163 NDUFAF3Q9BU61 184 aa12.55□□□□□ -0.4
SMN1-204ENST00000506163 TREM1Q9NP99 234 aa12.55□□□□□ -0.4
SMN1-204ENST00000506163 PSG8Q9UQ74 426 aa12.55□□□□□ -0.4
SMN1-204ENST00000506163 DNAH6Q9C0G6 4158 aa12.55□□□□□ -0.4
SMN1-204ENST00000506163 GAGE12BA1L429 117 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 GAGE7O76087 117 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 GAGE12FP0CL80 117 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 GAGE12GP0CL81 117 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 GAGE12IP0CL82 117 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 ZNF80P51504 273 aaPredicted RBP12.54□□□□□ -0.4
SMN1-204ENST00000506163 TMEM88Q6PEY1 159 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 AKAP14Q86UN6 197 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 MDFICQ9P1T7 246 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 TRAV34A0A0B4J273 112 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 SERTM2A0A1B0GWG4 89 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 SNURFLB1AK76 121 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 UMAD1C9J7I0 102 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 F5H768 121 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 TPT1P13693 172 aaKnown RBP12.54□□□□□ -0.4
SMN1-204ENST00000506163 CYB561D1Q8N8Q1 229 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 ZNF680Q8NEM1 530 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 SFT2D1Q8WV19 159 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 ATG101Q9BSB4 218 aa12.54□□□□□ -0.4
SMN1-204ENST00000506163 A0A1B0GV50 99 aa12.53□□□□□ -0.4
SMN1-204ENST00000506163 ATP5G1P05496 136 aa12.53□□□□□ -0.4
SMN1-204ENST00000506163 ATP5G3P48201 142 aa12.53□□□□□ -0.4
SMN1-204ENST00000506163 TCL1AP56279 114 aa12.53□□□□□ -0.4
SMN1-204ENST00000506163 FLI1Q01543 452 aaPredicted RBP12.53□□□□□ -0.4
SMN1-204ENST00000506163 PRNTQ86SH4 94 aa12.53□□□□□ -0.4
SMN1-204ENST00000506163 TMEM75Q8N9X5 138 aa12.53□□□□□ -0.4
SMN1-204ENST00000506163 FAM210BQ96KR6 192 aa12.53□□□□□ -0.4
SMN1-204ENST00000506163 SPINK4O60575 86 aa12.52□□□□□ -0.41
SMN1-204ENST00000506163 IFNA7P01567 189 aa12.52□□□□□ -0.41
SMN1-204ENST00000506163 HOXA5P20719 270 aa12.52□□□□□ -0.41
SMN1-204ENST00000506163 EIF5AP63241 154 aaKnown RBP12.52□□□□□ -0.41
SMN1-204ENST00000506163 IBA57Q5T440 356 aaKnown RBP12.52□□□□□ -0.41
SMN1-204ENST00000506163 C11orf21Q9P2W6 132 aa12.52□□□□□ -0.41
SMN1-204ENST00000506163 PEX7O00628 323 aa12.51□□□□□ -0.41
SMN1-204ENST00000506163 GNRH2O43555 120 aa12.51□□□□□ -0.41
SMN1-204ENST00000506163 DPPA3Q6W0C5 159 aa12.51□□□□□ -0.41
SMN1-204ENST00000506163 C9orf62Q8N4C0 152 aa12.51□□□□□ -0.41
SMN1-204ENST00000506163 MUC4Q99102 2169 aa12.5□□□□□ -0.41
SMN1-204ENST00000506163 K7EQM0 130 aa12.5□□□□□ -0.41
SMN1-204ENST00000506163 PAGE4O60829 102 aa12.5□□□□□ -0.41
SMN1-204ENST00000506163 CCL20P78556 96 aa12.5□□□□□ -0.41
SMN1-204ENST00000506163 TMEM183BQ1AE95 376 aa12.5□□□□□ -0.41
SMN1-204ENST00000506163 TDRG1Q3Y452 100 aa12.5□□□□□ -0.41
SMN1-204ENST00000506163 TMEM183AQ8IXX5 376 aa12.5□□□□□ -0.41
SMN1-204ENST00000506163 NKX6-2Q9C056 277 aaPredicted RBP12.5□□□□□ -0.41
SMN1-204ENST00000506163 NAGKQ9UJ70 344 aa12.5□□□□□ -0.41
SMN1-204ENST00000506163 TRGV1A0A0A0MS02 117 aa12.49□□□□□ -0.41
SMN1-204ENST00000506163 TRAV21A0A0B4J279 112 aa12.49□□□□□ -0.41
SMN1-204ENST00000506163 H2AFB1P0C5Y9 115 aa12.49□□□□□ -0.41
SMN1-204ENST00000506163 MRPL16Q9NX20 251 aaKnown RBP12.49□□□□□ -0.41
SMN1-204ENST00000506163 IGHV3-16A0A0C4DH30 117 aa12.48□□□□□ -0.41
SMN1-204ENST00000506163 CST9LP1Q5W188 147 aa12.48□□□□□ -0.41
SMN1-204ENST00000506163 FAM159AQ6UWV7 190 aa12.48□□□□□ -0.41
SMN1-204ENST00000506163 C18orf15Q96N68 181 aa12.48□□□□□ -0.41
SMN1-204ENST00000506163 NDFIP1Q9BT67 221 aa12.48□□□□□ -0.41
SMN1-204ENST00000506163 ARL2-SNX15V9GYD0 113 aa12.48□□□□□ -0.41
SMN1-204ENST00000506163 GCGP01275 180 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms