RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 RBAKDNA6NC62 111 aa14.36□□□□□ -0.11
SQSTM1-210ENST00000506042 FAM229AH3BQW9 127 aa14.36□□□□□ -0.11
SQSTM1-210ENST00000506042 IGKV2D-40P01614 121 aaPredicted RBP14.36□□□□□ -0.11
SQSTM1-210ENST00000506042 IQCF2Q8IXL9 164 aa14.36□□□□□ -0.11
SQSTM1-210ENST00000506042 LENEPQ9Y5L5 61 aa14.36□□□□□ -0.11
SQSTM1-210ENST00000506042 HSPG2P98160 4391 aa14.36□□□□□ -0.11
SQSTM1-210ENST00000506042 A0A087WTM6 91 aa14.35□□□□□ -0.11
SQSTM1-210ENST00000506042 E5RGE8 158 aa14.35□□□□□ -0.11
SQSTM1-210ENST00000506042 FAM74A1Q5RGS3 127 aa14.35□□□□□ -0.11
SQSTM1-210ENST00000506042 ZFAND2AQ8N6M9 145 aa14.35□□□□□ -0.11
SQSTM1-210ENST00000506042 ATP5SQ99766 215 aa14.35□□□□□ -0.11
SQSTM1-210ENST00000506042 PAXXQ9BUH6 204 aa14.35□□□□□ -0.11
SQSTM1-210ENST00000506042 IGSF23A1L1A6 192 aa14.34□□□□□ -0.11
SQSTM1-210ENST00000506042 OR7C2O60412 319 aa14.34□□□□□ -0.11
SQSTM1-210ENST00000506042 GCSHP23434 173 aa14.34□□□□□ -0.11
SQSTM1-210ENST00000506042 RAB32Q13637 225 aa14.34□□□□□ -0.11
SQSTM1-210ENST00000506042 FHL2Q14192 279 aa14.34□□□□□ -0.11
SQSTM1-210ENST00000506042 Q5VSD8 79 aa14.34□□□□□ -0.11
SQSTM1-210ENST00000506042 OR10G4Q8NGN3 311 aa14.34□□□□□ -0.11
SQSTM1-210ENST00000506042 H2AFB2P0C5Z0 115 aa14.33□□□□□ -0.12
SQSTM1-210ENST00000506042 GYPEP15421 78 aa14.33□□□□□ -0.12
SQSTM1-210ENST00000506042 TAS2R45P59539 299 aa14.33□□□□□ -0.12
SQSTM1-210ENST00000506042 ZNF266Q14584 549 aa14.33□□□□□ -0.12
SQSTM1-210ENST00000506042 MZT2BQ6NZ67 158 aa14.33□□□□□ -0.12
SQSTM1-210ENST00000506042 SEC22CQ9BRL7 303 aa14.33□□□□□ -0.12
SQSTM1-210ENST00000506042 SLC25A2Q9BXI2 301 aa14.33□□□□□ -0.12
SQSTM1-210ENST00000506042 RBM38Q9H0Z9 239 aaKnown RBP14.33□□□□□ -0.12
SQSTM1-210ENST00000506042 K7EQD1 137 aa14.32□□□□□ -0.12
SQSTM1-210ENST00000506042 NTN5Q8WTR8 489 aaPredicted RBP14.32□□□□□ -0.12
SQSTM1-210ENST00000506042 C11orf1Q9H5F2 150 aa14.32□□□□□ -0.12
SQSTM1-210ENST00000506042 TP53TG3Q9ULZ0 132 aa14.32□□□□□ -0.12
SQSTM1-210ENST00000506042 FAM240BA0A1B0GVZ2 78 aa14.31□□□□□ -0.12
SQSTM1-210ENST00000506042 CRYGDP07320 174 aa14.31□□□□□ -0.12
SQSTM1-210ENST00000506042 DNAH10OSP0CZ25 163 aa14.31□□□□□ -0.12
SQSTM1-210ENST00000506042 PPT1P50897 306 aa14.31□□□□□ -0.12
SQSTM1-210ENST00000506042 OR4C5Q8NGB2 326 aa14.31□□□□□ -0.12
SQSTM1-210ENST00000506042 OR5C1Q8NGR4 320 aa14.31□□□□□ -0.12
SQSTM1-210ENST00000506042 CMTM2Q8TAZ6 248 aa14.31□□□□□ -0.12
SQSTM1-210ENST00000506042 RASL10AQ92737 203 aa14.31□□□□□ -0.12
SQSTM1-210ENST00000506042 SDHCQ99643 169 aaPredicted RBP14.31□□□□□ -0.12
SQSTM1-210ENST00000506042 SH3BGRL3Q9H299 93 aa14.31□□□□□ -0.12
SQSTM1-210ENST00000506042 UBE2L3P68036 154 aaKnown RBP14.3□□□□□ -0.12
SQSTM1-210ENST00000506042 CYCSP99999 105 aaKnown RBP14.3□□□□□ -0.12
SQSTM1-210ENST00000506042 KHDC3LQ587J8 217 aa14.3□□□□□ -0.12
SQSTM1-210ENST00000506042 MUC21Q5SSG8 566 aa14.3□□□□□ -0.12
SQSTM1-210ENST00000506042 MIR17HGQ75NE6 70 aa14.3□□□□□ -0.12
SQSTM1-210ENST00000506042 NHLRC2Q8NBF2 726 aa14.3□□□□□ -0.12
SQSTM1-210ENST00000506042 THAP6Q8TBB0 222 aa14.3□□□□□ -0.12
SQSTM1-210ENST00000506042 TRAV8-6A0A0B4J262 113 aa14.29□□□□□ -0.12
SQSTM1-210ENST00000506042 TRAV4A0A0B4J268 109 aa14.29□□□□□ -0.12
SQSTM1-210ENST00000506042 OR10J4P0C629 311 aa14.29□□□□□ -0.12
SQSTM1-210ENST00000506042 RANP62826 216 aaKnown RBP14.29□□□□□ -0.12
SQSTM1-210ENST00000506042 TMEM183BQ1AE95 376 aa14.29□□□□□ -0.12
SQSTM1-210ENST00000506042 TMEM183AQ8IXX5 376 aa14.29□□□□□ -0.12
SQSTM1-210ENST00000506042 TMED6Q8WW62 240 aa14.29□□□□□ -0.12
SQSTM1-210ENST00000506042 CCDC32Q9BV29 185 aa14.29□□□□□ -0.12
SQSTM1-210ENST00000506042 IGLV5-52A0A0A0MRZ9 124 aa14.28□□□□□ -0.12
SQSTM1-210ENST00000506042 PLA2G10O15496 165 aa14.28□□□□□ -0.12
SQSTM1-210ENST00000506042 CIDEAO60543 219 aa14.28□□□□□ -0.12
SQSTM1-210ENST00000506042 XGP55808 180 aa14.28□□□□□ -0.12
SQSTM1-210ENST00000506042 Q6AWC8 147 aa14.28□□□□□ -0.12
SQSTM1-210ENST00000506042 WFDC10BQ8IUB3 73 aa14.28□□□□□ -0.12
SQSTM1-210ENST00000506042 Q8TAT8 98 aa14.28□□□□□ -0.12
SQSTM1-210ENST00000506042 KCNS1Q96KK3 526 aa14.28□□□□□ -0.12
SQSTM1-210ENST00000506042 NAGKQ9UJ70 344 aa14.28□□□□□ -0.12
SQSTM1-210ENST00000506042 M0R2P5 195 aa14.27□□□□□ -0.13
SQSTM1-210ENST00000506042 GCSAMLQ5JQS6 135 aa14.27□□□□□ -0.13
SQSTM1-210ENST00000506042 PRR9Q5T870 116 aa14.27□□□□□ -0.13
SQSTM1-210ENST00000506042 FXYD5Q96DB9 178 aa14.27□□□□□ -0.13
SQSTM1-210ENST00000506042 ZNF479Q96JC4 524 aa14.27□□□□□ -0.13
SQSTM1-210ENST00000506042 FAM167A-AS1Q96KT0 104 aa14.27□□□□□ -0.13
SQSTM1-210ENST00000506042 TMEM70Q9BUB7 260 aa14.27□□□□□ -0.13
SQSTM1-210ENST00000506042 IGHV3-38A0A0C4DH36 116 aa14.26□□□□□ -0.13
SQSTM1-210ENST00000506042 PFN1P07737 140 aaKnown RBP14.26□□□□□ -0.13
SQSTM1-210ENST00000506042 SFTA3P0C7M3 94 aa14.26□□□□□ -0.13
SQSTM1-210ENST00000506042 PET100P0DJ07 73 aa14.26□□□□□ -0.13
SQSTM1-210ENST00000506042 TIRAPP58753 221 aa14.26□□□□□ -0.13
SQSTM1-210ENST00000506042 Q6ZSN1 163 aa14.26□□□□□ -0.13
SQSTM1-210ENST00000506042 SCGB1C1Q8TD33 95 aa14.26□□□□□ -0.13
SQSTM1-210ENST00000506042 PHYHIPLQ96FC7 376 aa14.26□□□□□ -0.13
SQSTM1-210ENST00000506042 WDR61Q9GZS3 305 aaKnown RBP14.26□□□□□ -0.13
SQSTM1-210ENST00000506042 NDUFA13Q9P0J0 144 aa14.26□□□□□ -0.13
SQSTM1-210ENST00000506042 TNFRSF18Q9Y5U5 241 aa14.26□□□□□ -0.13
SQSTM1-210ENST00000506042 TRAV21A0A0B4J279 112 aa14.25□□□□□ -0.13
SQSTM1-210ENST00000506042 NHLH2Q02577 135 aa14.25□□□□□ -0.13
SQSTM1-210ENST00000506042 PRADC1Q9BSG0 188 aa14.25□□□□□ -0.13
SQSTM1-210ENST00000506042 NDFIP1Q9BT67 221 aa14.25□□□□□ -0.13
SQSTM1-210ENST00000506042 SDF2L1Q9HCN8 221 aa14.25□□□□□ -0.13
SQSTM1-210ENST00000506042 MDFICQ9P1T7 246 aa14.25□□□□□ -0.13
SQSTM1-210ENST00000506042 KRTAP10-1P60331 282 aa14.24□□□□□ -0.13
SQSTM1-210ENST00000506042 IL15RAQ13261 267 aa14.24□□□□□ -0.13
SQSTM1-210ENST00000506042 TDRG1Q3Y452 100 aa14.24□□□□□ -0.13
SQSTM1-210ENST00000506042 NMES1Q9C002 83 aa14.24□□□□□ -0.13
SQSTM1-210ENST00000506042 LRP1BQ9NZR2 4599 aa14.24□□□□□ -0.13
SQSTM1-210ENST00000506042 DIRC3C9JPN6 131 aa14.23□□□□□ -0.13
SQSTM1-210ENST00000506042 ARL6IP6Q8N6S5 226 aa14.23□□□□□ -0.13
SQSTM1-210ENST00000506042 FBLL1A6NHQ2 334 aaKnown RBP14.22□□□□□ -0.13
SQSTM1-210ENST00000506042 OR10J3Q5JRS4 329 aa14.22□□□□□ -0.13
SQSTM1-210ENST00000506042 FFAR4Q5NUL3 377 aa14.22□□□□□ -0.13
SQSTM1-210ENST00000506042 ENKURQ8TC29 256 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms