RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 BLNKQ8WV28 456 aa7.42□□□□□ -1.22
NR1I3-222ENST00000506018 C16orf74Q96GX8 76 aa7.42□□□□□ -1.22
NR1I3-222ENST00000506018 FAM210AQ96ND0 272 aa7.42□□□□□ -1.22
NR1I3-222ENST00000506018 C20orf144Q9BQM9 153 aa7.42□□□□□ -1.22
NR1I3-222ENST00000506018 TCEAL7Q9BRU2 100 aa7.42□□□□□ -1.22
NR1I3-222ENST00000506018 VAX2Q9UIW0 290 aa7.42□□□□□ -1.22
NR1I3-222ENST00000506018 PRELID1Q9Y255 219 aa7.42□□□□□ -1.22
NR1I3-222ENST00000506018 TRBV19A0A075B6N1 114 aa7.41□□□□□ -1.22
NR1I3-222ENST00000506018 LINC00862A6NCI5 91 aa7.41□□□□□ -1.22
NR1I3-222ENST00000506018 RBFOX3A6NFN3 312 aa7.41□□□□□ -1.22
NR1I3-222ENST00000506018 FAM229AH3BQW9 127 aa7.41□□□□□ -1.22
NR1I3-222ENST00000506018 H7BYZ3 331 aa7.41□□□□□ -1.22
NR1I3-222ENST00000506018 MRPS12O15235 138 aaKnown RBP7.41□□□□□ -1.22
NR1I3-222ENST00000506018 NDUFS6O75380 124 aaKnown RBP7.41□□□□□ -1.22
NR1I3-222ENST00000506018 HTN1P15515 57 aa7.41□□□□□ -1.22
NR1I3-222ENST00000506018 CSN1S1P47710 185 aa7.41□□□□□ -1.22
NR1I3-222ENST00000506018 CST9LP1Q5W188 147 aa7.41□□□□□ -1.22
NR1I3-222ENST00000506018 ZNF493Q6ZR52 646 aa7.41□□□□□ -1.22
NR1I3-222ENST00000506018 CCDC28AQ8IWP9 274 aa7.41□□□□□ -1.22
NR1I3-222ENST00000506018 ARL6IP6Q8N6S5 226 aa7.41□□□□□ -1.22
NR1I3-222ENST00000506018 CMTM2Q8TAZ6 248 aa7.41□□□□□ -1.22
NR1I3-222ENST00000506018 RXFP4Q8TDU9 374 aa7.41□□□□□ -1.22
NR1I3-222ENST00000506018 PCNPQ8WW12 178 aaKnown RBP7.41□□□□□ -1.22
NR1I3-222ENST00000506018 TMPRSS5Q9H3S3 457 aa7.41□□□□□ -1.22
NR1I3-222ENST00000506018 ZNF586Q9NXT0 402 aa7.41□□□□□ -1.22
NR1I3-222ENST00000506018 FRAS1Q86XX4 4008 aa7.4□□□□□ -1.22
NR1I3-222ENST00000506018 K7EQM0 130 aa7.4□□□□□ -1.22
NR1I3-222ENST00000506018 PDE6DO43924 150 aa7.4□□□□□ -1.22
NR1I3-222ENST00000506018 PAGE4O60829 102 aa7.4□□□□□ -1.22
NR1I3-222ENST00000506018 EIF3GO75821 320 aaKnown RBP eCLIP7.4□□□□□ -1.22
NR1I3-222ENST00000506018 DEFB130BP0DP73 79 aa7.4□□□□□ -1.22
NR1I3-222ENST00000506018 DEFB130AP0DP74 79 aa7.4□□□□□ -1.22
NR1I3-222ENST00000506018 BCL2P10415 239 aa7.4□□□□□ -1.22
NR1I3-222ENST00000506018 RANP62826 216 aaKnown RBP7.4□□□□□ -1.22
NR1I3-222ENST00000506018 MEF2BQ02080 365 aaPredicted RBP7.4□□□□□ -1.22
NR1I3-222ENST00000506018 RNF212Q495C1 297 aa7.4□□□□□ -1.22
NR1I3-222ENST00000506018 UQCC3Q6UW78 93 aa7.4□□□□□ -1.22
NR1I3-222ENST00000506018 ZNF503Q96F45 646 aa7.4□□□□□ -1.22
NR1I3-222ENST00000506018 OTORQ9NRC9 128 aa7.4□□□□□ -1.22
NR1I3-222ENST00000506018 SERTM2A0A1B0GWG4 89 aa7.39□□□□□ -1.23
NR1I3-222ENST00000506018 FAM74A7A6NL05 159 aa7.39□□□□□ -1.23
NR1I3-222ENST00000506018 H3BQ15 152 aa7.39□□□□□ -1.23
NR1I3-222ENST00000506018 ATP5G1P05496 136 aa7.39□□□□□ -1.23
NR1I3-222ENST00000506018 LEPP41159 167 aa7.39□□□□□ -1.23
NR1I3-222ENST00000506018 ATP5G3P48201 142 aa7.39□□□□□ -1.23
NR1I3-222ENST00000506018 UBE2G2P60604 165 aa7.39□□□□□ -1.23
NR1I3-222ENST00000506018 CCL20P78556 96 aa7.39□□□□□ -1.23
NR1I3-222ENST00000506018 SOHLH1Q5JUK2 328 aa7.39□□□□□ -1.23
NR1I3-222ENST00000506018 TMEM88Q6PEY1 159 aa7.39□□□□□ -1.23
NR1I3-222ENST00000506018 TMEM263Q8WUH6 116 aaKnown RBP7.39□□□□□ -1.23
NR1I3-222ENST00000506018 ATG101Q9BSB4 218 aa7.39□□□□□ -1.23
NR1I3-222ENST00000506018 Q9H3A6 140 aa7.39□□□□□ -1.23
NR1I3-222ENST00000506018 TIMM8BQ9Y5J9 83 aaPredicted RBP7.39□□□□□ -1.23
NR1I3-222ENST00000506018 PGPA6NDG6 321 aa7.38□□□□□ -1.23
NR1I3-222ENST00000506018 CBY3A6NI87 242 aa7.38□□□□□ -1.23
NR1I3-222ENST00000506018 F5H768 121 aa7.38□□□□□ -1.23
NR1I3-222ENST00000506018 SLC25A5P05141 298 aaKnown RBP7.38□□□□□ -1.23
NR1I3-222ENST00000506018 SNRPCP09234 159 aaKnown RBP7.38□□□□□ -1.23
NR1I3-222ENST00000506018 FAM3BP58499 235 aaPredicted RBP7.38□□□□□ -1.23
NR1I3-222ENST00000506018 SUMO1P63165 101 aaKnown RBP7.38□□□□□ -1.23
NR1I3-222ENST00000506018 LGALS9BQ3B8N2 356 aa7.38□□□□□ -1.23
NR1I3-222ENST00000506018 TOR2AQ5JU69 321 aa7.38□□□□□ -1.23
NR1I3-222ENST00000506018 ZNF506Q5JVG8 444 aa7.38□□□□□ -1.23
NR1I3-222ENST00000506018 COMMD7Q86VX2 200 aa7.38□□□□□ -1.23
NR1I3-222ENST00000506018 C5orf17Q8NAS9 161 aa7.38□□□□□ -1.23
NR1I3-222ENST00000506018 HIST1H2BAQ96A08 127 aa7.38□□□□□ -1.23
NR1I3-222ENST00000506018 MRPL53Q96EL3 112 aaKnown RBP7.38□□□□□ -1.23
NR1I3-222ENST00000506018 ODF3Q96PU9 254 aa7.38□□□□□ -1.23
NR1I3-222ENST00000506018 DNAH6Q9C0G6 4158 aa7.37□□□□□ -1.23
NR1I3-222ENST00000506018 NACAE9PAV3 2078 aa7.37□□□□□ -1.23
NR1I3-222ENST00000506018 VPS13DQ5THJ4 4388 aa7.37□□□□□ -1.23
NR1I3-222ENST00000506018 FBLL1A6NHQ2 334 aaKnown RBP7.37□□□□□ -1.23
NR1I3-222ENST00000506018 SNURFLB1AK76 121 aa7.37□□□□□ -1.23
NR1I3-222ENST00000506018 TMEM250H0YL14 139 aa7.37□□□□□ -1.23
NR1I3-222ENST00000506018 H3BTX0 84 aa7.37□□□□□ -1.23
NR1I3-222ENST00000506018 M0R2N4 97 aa7.37□□□□□ -1.23
NR1I3-222ENST00000506018 SLC17A3O00476 420 aa7.37□□□□□ -1.23
NR1I3-222ENST00000506018 S100A9P06702 114 aaKnown RBP7.37□□□□□ -1.23
NR1I3-222ENST00000506018 ICAM4Q14773 271 aa7.37□□□□□ -1.23
NR1I3-222ENST00000506018 EIF4E3Q8N5X7 224 aaKnown RBP7.37□□□□□ -1.23
NR1I3-222ENST00000506018 TREM1Q9NP99 234 aa7.37□□□□□ -1.23
NR1I3-222ENST00000506018 NDUFB4O95168 129 aa7.36□□□□□ -1.23
NR1I3-222ENST00000506018 PRM2P04554 102 aa7.36□□□□□ -1.23
NR1I3-222ENST00000506018 AZU1P20160 251 aa7.36□□□□□ -1.23
NR1I3-222ENST00000506018 PYGO2Q9BRQ0 406 aa7.36□□□□□ -1.23
NR1I3-222ENST00000506018 NOP10Q9NPE3 64 aaKnown RBP7.36□□□□□ -1.23
NR1I3-222ENST00000506018 IGLV2-18A0A075B6J9 118 aa7.35□□□□□ -1.23
NR1I3-222ENST00000506018 TMEM238LA0A1B0GVL6 79 aa7.35□□□□□ -1.23
NR1I3-222ENST00000506018 PRSS29PA6NIE9 313 aa7.35□□□□□ -1.23
NR1I3-222ENST00000506018 NPIPB6E9PJ23 425 aa7.35□□□□□ -1.23
NR1I3-222ENST00000506018 J3KRW8 73 aa7.35□□□□□ -1.23
NR1I3-222ENST00000506018 EIF4EBP3O60516 100 aaPredicted RBP7.35□□□□□ -1.23
NR1I3-222ENST00000506018 NUDT3O95989 172 aa7.35□□□□□ -1.23
NR1I3-222ENST00000506018 CCL18P55774 89 aa7.35□□□□□ -1.23
NR1I3-222ENST00000506018 FAM74A3Q4VXF1 159 aa7.35□□□□□ -1.23
NR1I3-222ENST00000506018 GFI1BQ5VTD9 330 aa7.35□□□□□ -1.23
NR1I3-222ENST00000506018 EXOC3-AS1Q8N2X6 119 aa7.35□□□□□ -1.23
NR1I3-222ENST00000506018 RNASE8Q8TDE3 154 aaKnown RBP7.35□□□□□ -1.23
NR1I3-222ENST00000506018 LINC00477Q96M19 166 aa7.35□□□□□ -1.23
NR1I3-222ENST00000506018 EPDR1Q9UM22 224 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms