RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 GLYATL3Q5SZD4 288 aa0.1□□□□□ -2.39
HMGB1P29-201ENST00000505659 LINC00305Q7Z4B0 112 aa0.1□□□□□ -2.39
HMGB1P29-201ENST00000505659 STX12Q86Y82 276 aa0.1□□□□□ -2.39
HMGB1P29-201ENST00000505659 CARD19Q96LW7 228 aa0.1□□□□□ -2.39
HMGB1P29-201ENST00000505659 HOPXQ9BPY8 73 aaPredicted RBP0.1□□□□□ -2.39
HMGB1P29-201ENST00000505659 KRTAP2-4Q9BYR9 128 aa0.1□□□□□ -2.39
HMGB1P29-201ENST00000505659 KRTAP2-1Q9BYU5 128 aa0.1□□□□□ -2.39
HMGB1P29-201ENST00000505659 TAF9BQ9HBM6 251 aa0.1□□□□□ -2.39
HMGB1P29-201ENST00000505659 MPC1Q9Y5U8 109 aa0.1□□□□□ -2.39
HMGB1P29-201ENST00000505659 MYH3P11055 1940 aa0.1□□□□□ -2.39
HMGB1P29-201ENST00000505659 ATG2AQ2TAZ0 1938 aa0.1□□□□□ -2.39
HMGB1P29-201ENST00000505659 FGD6Q6ZV73 1430 aa0.1□□□□□ -2.39
HMGB1P29-201ENST00000505659 FAT4Q6V0I7 4981 aa0.09□□□□□ -2.39
HMGB1P29-201ENST00000505659 LOC107984156A0A0G2JMH3 177 aa0.09□□□□□ -2.4
HMGB1P29-201ENST00000505659 TRBV7-6A0A0J9YX20 115 aa0.09□□□□□ -2.4
HMGB1P29-201ENST00000505659 TMEM30CPA0ZSE6 113 aa0.09□□□□□ -2.4
HMGB1P29-201ENST00000505659 TMEM189A5PLL7 270 aa0.09□□□□□ -2.4
HMGB1P29-201ENST00000505659 FXYD1O00168 92 aa0.09□□□□□ -2.4
HMGB1P29-201ENST00000505659 TPST1O60507 370 aa0.09□□□□□ -2.4
HMGB1P29-201ENST00000505659 EDF1O60869 148 aaKnown RBP0.09□□□□□ -2.4
HMGB1P29-201ENST00000505659 LY6G6CO95867 125 aa0.09□□□□□ -2.4
HMGB1P29-201ENST00000505659 CD3DP04234 171 aa0.09□□□□□ -2.4
HMGB1P29-201ENST00000505659 SDC4P31431 198 aa0.09□□□□□ -2.4
HMGB1P29-201ENST00000505659 CRYBA4P53673 196 aa0.09□□□□□ -2.4
HMGB1P29-201ENST00000505659 RPL37P61927 97 aaKnown RBP0.09□□□□□ -2.4
HMGB1P29-201ENST00000505659 FXYD3Q14802 87 aa0.09□□□□□ -2.4
HMGB1P29-201ENST00000505659 TMEM78Q5T7P6 136 aa0.09□□□□□ -2.4
HMGB1P29-201ENST00000505659 CSAG1Q6PB30 78 aa0.09□□□□□ -2.4
HMGB1P29-201ENST00000505659 DEFB132Q7Z7B7 95 aa0.09□□□□□ -2.4
HMGB1P29-201ENST00000505659 ARL17AQ8IVW1 177 aa0.09□□□□□ -2.4
HMGB1P29-201ENST00000505659 MORN4Q8NDC4 146 aa0.09□□□□□ -2.4
HMGB1P29-201ENST00000505659 DMAC1Q96GE9 116 aa0.09□□□□□ -2.4
HMGB1P29-201ENST00000505659 NABP2Q9BQ15 211 aa0.09□□□□□ -2.4
HMGB1P29-201ENST00000505659 SMIM7Q9BQ49 75 aa0.09□□□□□ -2.4
HMGB1P29-201ENST00000505659 PCBD2Q9H0N5 130 aa0.09□□□□□ -2.4
HMGB1P29-201ENST00000505659 MRPL36Q9P0J6 103 aaKnown RBP0.09□□□□□ -2.4
HMGB1P29-201ENST00000505659 ANKRD17O75179 2603 aaKnown RBP0.09□□□□□ -2.4
HMGB1P29-201ENST00000505659 USP54Q70EL1 1684 aa0.08□□□□□ -2.4
HMGB1P29-201ENST00000505659 ANKRD31Q8N7Z5 1873 aa0.08□□□□□ -2.4
HMGB1P29-201ENST00000505659 PNMA8CA0A1B0GUJ8 204 aa0.08□□□□□ -2.4
HMGB1P29-201ENST00000505659 A0A1B0GV72 72 aa0.08□□□□□ -2.4
HMGB1P29-201ENST00000505659 A0A1W2PRE2 83 aa0.08□□□□□ -2.4
HMGB1P29-201ENST00000505659 MCRIP1C9JLW8 97 aa0.08□□□□□ -2.4
HMGB1P29-201ENST00000505659 H3BMG7 143 aa0.08□□□□□ -2.4
HMGB1P29-201ENST00000505659 H7BYZ3 331 aa0.08□□□□□ -2.4
HMGB1P29-201ENST00000505659 IFNA21P01568 189 aa0.08□□□□□ -2.4
HMGB1P29-201ENST00000505659 CRYGSP22914 178 aa0.08□□□□□ -2.4
HMGB1P29-201ENST00000505659 BLCAPP62952 87 aa0.08□□□□□ -2.4
HMGB1P29-201ENST00000505659 ZNF56Q15929 161 aa0.08□□□□□ -2.4
HMGB1P29-201ENST00000505659 ASB16-AS1Q495Z4 193 aa0.08□□□□□ -2.4
HMGB1P29-201ENST00000505659 IDO2Q6ZQW0 420 aa0.08□□□□□ -2.4
HMGB1P29-201ENST00000505659 TEX29Q8N6K0 151 aa0.08□□□□□ -2.4
HMGB1P29-201ENST00000505659 OR51A4Q8NGJ6 313 aa0.08□□□□□ -2.4
HMGB1P29-201ENST00000505659 PPP1R1CQ8WVI7 109 aa0.08□□□□□ -2.4
HMGB1P29-201ENST00000505659 LINC00208Q96KT6 92 aa0.08□□□□□ -2.4
HMGB1P29-201ENST00000505659 ATG5Q9H1Y0 275 aa0.08□□□□□ -2.4
HMGB1P29-201ENST00000505659 FKBP11Q9NYL4 201 aa0.08□□□□□ -2.4
HMGB1P29-201ENST00000505659 MED31Q9Y3C7 131 aa0.08□□□□□ -2.4
HMGB1P29-201ENST00000505659 V9GYQ6 96 aa0.08□□□□□ -2.4
HMGB1P29-201ENST00000505659 A2MP01023 1474 aa0.08□□□□□ -2.4
HMGB1P29-201ENST00000505659 CDK12Q9NYV4 1490 aaPredicted RBP0.08□□□□□ -2.4
HMGB1P29-201ENST00000505659 KIAA1549LQ6ZVL6 1849 aa0.08□□□□□ -2.4
HMGB1P29-201ENST00000505659 LOC285556D6RIA3 1793 aa0.07□□□□□ -2.4
HMGB1P29-201ENST00000505659 FAM135BQ49AJ0 1406 aa0.07□□□□□ -2.4
HMGB1P29-201ENST00000505659 A0A0G2JMM0 328 aa0.07□□□□□ -2.4
HMGB1P29-201ENST00000505659 NBDYA0A0U1RRE5 68 aa0.07□□□□□ -2.4
HMGB1P29-201ENST00000505659 LOC101927531A0A1B0GV80 90 aa0.07□□□□□ -2.4
HMGB1P29-201ENST00000505659 APOC1P02654 83 aa0.07□□□□□ -2.4
HMGB1P29-201ENST00000505659 SLC25A4P12235 298 aa0.07□□□□□ -2.4
HMGB1P29-201ENST00000505659 G0S2P27469 103 aa0.07□□□□□ -2.4
HMGB1P29-201ENST00000505659 CKS2P33552 79 aa0.07□□□□□ -2.4
HMGB1P29-201ENST00000505659 GNG10P50151 68 aa0.07□□□□□ -2.4
HMGB1P29-201ENST00000505659 POLR2HP52434 150 aaKnown RBP0.07□□□□□ -2.4
HMGB1P29-201ENST00000505659 KLKP1Q107X0 134 aa0.07□□□□□ -2.4
HMGB1P29-201ENST00000505659 RHOHQ15669 191 aa0.07□□□□□ -2.4
HMGB1P29-201ENST00000505659 UNQ5815/PRO19632Q6UWF5 114 aa0.07□□□□□ -2.4
HMGB1P29-201ENST00000505659 LYPD5Q6UWN5 251 aa0.07□□□□□ -2.4
HMGB1P29-201ENST00000505659 TOMM20LQ6UXN7 152 aa0.07□□□□□ -2.4
HMGB1P29-201ENST00000505659 C5orf56Q8N8D9 126 aa0.07□□□□□ -2.4
HMGB1P29-201ENST00000505659 OR5A2Q8NGI9 324 aa0.07□□□□□ -2.4
HMGB1P29-201ENST00000505659 OR9Q1Q8NGQ5 310 aa0.07□□□□□ -2.4
HMGB1P29-201ENST00000505659 THEM6Q8WUY1 208 aa0.07□□□□□ -2.4
HMGB1P29-201ENST00000505659 VPS25Q9BRG1 176 aa0.07□□□□□ -2.4
HMGB1P29-201ENST00000505659 CENPHQ9H3R5 247 aa0.07□□□□□ -2.4
HMGB1P29-201ENST00000505659 TMEM14BQ9NUH8 114 aa0.07□□□□□ -2.4
HMGB1P29-201ENST00000505659 NEBP20929 6669 aa0.07□□□□□ -2.4
HMGB1P29-201ENST00000505659 CTTNBP2Q8WZ74 1663 aa0.07□□□□□ -2.4
HMGB1P29-201ENST00000505659 SYNE1Q8NF91 8797 aaKnown RBP0.07□□□□□ -2.4
HMGB1P29-201ENST00000505659 BLMP54132 1417 aaPredicted RBP0.06□□□□□ -2.4
HMGB1P29-201ENST00000505659 ANK1P16157 1881 aa0.06□□□□□ -2.4
HMGB1P29-201ENST00000505659 IGHV1-24A0A0C4DH33 117 aa0.06□□□□□ -2.4
HMGB1P29-201ENST00000505659 LOC107984640A0A0U1RRK4 108 aa0.06□□□□□ -2.4
HMGB1P29-201ENST00000505659 CDC42EP2O14613 210 aa0.06□□□□□ -2.4
HMGB1P29-201ENST00000505659 UQCRQO14949 82 aa0.06□□□□□ -2.4
HMGB1P29-201ENST00000505659 HBDP02042 147 aa0.06□□□□□ -2.4
HMGB1P29-201ENST00000505659 IL7P13232 177 aa0.06□□□□□ -2.4
HMGB1P29-201ENST00000505659 RPL22P35268 128 aaKnown RBP0.06□□□□□ -2.4
HMGB1P29-201ENST00000505659 POLR2JP52435 117 aaKnown RBP0.06□□□□□ -2.4
HMGB1P29-201ENST00000505659 PSPHP78330 225 aa0.06□□□□□ -2.4
HMGB1P29-201ENST00000505659 TFAMQ00059 246 aaKnown RBP0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms