RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 NOL3O60936 208 aaKnown RBP3.95□□□□□ -1.78
GYPB-205ENST00000505583 ZNF253O75346 499 aa3.95□□□□□ -1.78
GYPB-205ENST00000505583 GPX1P07203 203 aa3.95□□□□□ -1.78
GYPB-205ENST00000505583 SFTA3P0C7M3 94 aa3.95□□□□□ -1.78
GYPB-205ENST00000505583 CRISP2P16562 243 aa3.95□□□□□ -1.78
GYPB-205ENST00000505583 S100A5P33763 92 aa3.95□□□□□ -1.78
GYPB-205ENST00000505583 PCP4P48539 62 aa3.95□□□□□ -1.78
GYPB-205ENST00000505583 CAV2P51636 162 aa3.95□□□□□ -1.78
GYPB-205ENST00000505583 ERVFC1-1P60608 527 aa3.95□□□□□ -1.78
GYPB-205ENST00000505583 GUK1Q16774 197 aa3.95□□□□□ -1.78
GYPB-205ENST00000505583 VWC2Q2TAL6 325 aa3.95□□□□□ -1.78
GYPB-205ENST00000505583 Q6ZRG5 221 aa3.95□□□□□ -1.78
GYPB-205ENST00000505583 C9orf47Q6ZRZ4 202 aa3.95□□□□□ -1.78
GYPB-205ENST00000505583 S100A7AQ86SG5 101 aa3.95□□□□□ -1.78
GYPB-205ENST00000505583 ZNF680Q8NEM1 530 aa3.95□□□□□ -1.78
GYPB-205ENST00000505583 Q8TAT8 98 aa3.95□□□□□ -1.78
GYPB-205ENST00000505583 BLNKQ8WV28 456 aa3.95□□□□□ -1.78
GYPB-205ENST00000505583 MRPL53Q96EL3 112 aaKnown RBP3.95□□□□□ -1.78
GYPB-205ENST00000505583 RBM38Q9H0Z9 239 aaKnown RBP3.95□□□□□ -1.78
GYPB-205ENST00000505583 SLC39A9Q9NUM3 307 aa3.95□□□□□ -1.78
GYPB-205ENST00000505583 UQCC1Q9NVA1 299 aa3.95□□□□□ -1.78
GYPB-205ENST00000505583 PRO0255Q9UI72 69 aa3.95□□□□□ -1.78
GYPB-205ENST00000505583 RNF24Q9Y225 148 aa3.95□□□□□ -1.78
GYPB-205ENST00000505583 LSM5Q9Y4Y9 91 aaKnown RBP3.95□□□□□ -1.78
GYPB-205ENST00000505583 ICOSQ9Y6W8 199 aa3.95□□□□□ -1.78
GYPB-205ENST00000505583 MYCBP2O75592 4640 aa3.94□□□□□ -1.78
GYPB-205ENST00000505583 IGHV1OR15-1A0A075B7D0 117 aa3.94□□□□□ -1.78
GYPB-205ENST00000505583 NAP1L6A6NFF2 107 aa3.94□□□□□ -1.78
GYPB-205ENST00000505583 E5RGE8 158 aa3.94□□□□□ -1.78
GYPB-205ENST00000505583 K7EQD1 137 aa3.94□□□□□ -1.78
GYPB-205ENST00000505583 L7N2F9 121 aa3.94□□□□□ -1.78
GYPB-205ENST00000505583 PLA2G10O15496 165 aa3.94□□□□□ -1.78
GYPB-205ENST00000505583 MPDU1O75352 247 aa3.94□□□□□ -1.78
GYPB-205ENST00000505583 SCGB1D1O95968 90 aa3.94□□□□□ -1.78
GYPB-205ENST00000505583 HIST1H1EP10412 219 aaKnown RBP3.94□□□□□ -1.78
GYPB-205ENST00000505583 RPL29P47914 159 aaKnown RBP3.94□□□□□ -1.78
GYPB-205ENST00000505583 BCAP31P51572 246 aa3.94□□□□□ -1.78
GYPB-205ENST00000505583 ICAM4Q14773 271 aa3.94□□□□□ -1.78
GYPB-205ENST00000505583 MUC21Q5SSG8 566 aa3.94□□□□□ -1.78
GYPB-205ENST00000505583 IBA57Q5T440 356 aaKnown RBP3.94□□□□□ -1.78
GYPB-205ENST00000505583 TRIQKQ629K1 86 aa3.94□□□□□ -1.78
GYPB-205ENST00000505583 FAM122CQ6P4D5 195 aa3.94□□□□□ -1.78
GYPB-205ENST00000505583 OR1L4Q8NGR5 311 aa3.94□□□□□ -1.78
GYPB-205ENST00000505583 FRZBQ92765 325 aa3.94□□□□□ -1.78
GYPB-205ENST00000505583 ZNF479Q96JC4 524 aa3.94□□□□□ -1.78
GYPB-205ENST00000505583 FAM167A-AS1Q96KT0 104 aa3.94□□□□□ -1.78
GYPB-205ENST00000505583 LINC00477Q96M19 166 aa3.94□□□□□ -1.78
GYPB-205ENST00000505583 SEC22CQ9BRL7 303 aa3.94□□□□□ -1.78
GYPB-205ENST00000505583 SLC25A2Q9BXI2 301 aa3.94□□□□□ -1.78
GYPB-205ENST00000505583 TMEM14CQ9P0S9 112 aa3.94□□□□□ -1.78
GYPB-205ENST00000505583 HHLA3Q9XRX5 114 aa3.94□□□□□ -1.78
GYPB-205ENST00000505583 DMBT1Q9UGM3 2413 aaPredicted RBP3.94□□□□□ -1.78
GYPB-205ENST00000505583 FLG2Q5D862 2391 aaPredicted RBP3.94□□□□□ -1.78
GYPB-205ENST00000505583 VPS13BQ7Z7G8 4022 aa3.93□□□□□ -1.78
GYPB-205ENST00000505583 TRAV6A0A075B6T7 132 aa3.93□□□□□ -1.78
GYPB-205ENST00000505583 LOC100131303A0A0U1RQF7 123 aa3.93□□□□□ -1.78
GYPB-205ENST00000505583 LRCOL1A6NCL2 159 aa3.93□□□□□ -1.78
GYPB-205ENST00000505583 CCDC160A6NGH7 325 aa3.93□□□□□ -1.78
GYPB-205ENST00000505583 FAM25EA8MYX2 175 aa3.93□□□□□ -1.78
GYPB-205ENST00000505583 IL7P13232 177 aa3.93□□□□□ -1.78
GYPB-205ENST00000505583 INPP1P49441 399 aa3.93□□□□□ -1.78
GYPB-205ENST00000505583 TIRAPP58753 221 aa3.93□□□□□ -1.78
GYPB-205ENST00000505583 BAXQ07812 192 aa3.93□□□□□ -1.78
GYPB-205ENST00000505583 IL15RAQ13261 267 aa3.93□□□□□ -1.78
GYPB-205ENST00000505583 RAB31Q13636 194 aa3.93□□□□□ -1.78
GYPB-205ENST00000505583 MRPL23Q16540 153 aaKnown RBP3.93□□□□□ -1.78
GYPB-205ENST00000505583 SPANXN2Q5MJ10 180 aa3.93□□□□□ -1.78
GYPB-205ENST00000505583 MIR17HGQ75NE6 70 aa3.93□□□□□ -1.78
GYPB-205ENST00000505583 NEGR1Q7Z3B1 354 aa3.93□□□□□ -1.78
GYPB-205ENST00000505583 TMEM252Q8N6L7 170 aa3.93□□□□□ -1.78
GYPB-205ENST00000505583 FXYD5Q96DB9 178 aa3.93□□□□□ -1.78
GYPB-205ENST00000505583 PFDN5Q99471 154 aa3.93□□□□□ -1.78
GYPB-205ENST00000505583 MRPL32Q9BYC8 188 aaKnown RBP3.93□□□□□ -1.78
GYPB-205ENST00000505583 C20orf85Q9H1P6 137 aa3.93□□□□□ -1.78
GYPB-205ENST00000505583 PTTG2Q9NZH5 202 aa3.93□□□□□ -1.78
GYPB-205ENST00000505583 MSRB1Q9NZV6 116 aa3.93□□□□□ -1.78
GYPB-205ENST00000505583 ZNF492Q9P255 531 aa3.93□□□□□ -1.78
GYPB-205ENST00000505583 TIMM9Q9Y5J7 89 aa3.93□□□□□ -1.78
GYPB-205ENST00000505583 LY96Q9Y6Y9 160 aa3.93□□□□□ -1.78
GYPB-205ENST00000505583 DNAH8Q96JB1 4490 aa3.92□□□□□ -1.78
GYPB-205ENST00000505583 TRGV4A0A0C4DH28 118 aa3.92□□□□□ -1.78
GYPB-205ENST00000505583 C5orf51A6NDU8 294 aa3.92□□□□□ -1.78
GYPB-205ENST00000505583 EIF3GO75821 320 aaKnown RBP eCLIP3.92□□□□□ -1.78
GYPB-205ENST00000505583 IFNA5P01569 189 aa3.92□□□□□ -1.78
GYPB-205ENST00000505583 NMBP08949 121 aa3.92□□□□□ -1.78
GYPB-205ENST00000505583 OR10J4P0C629 311 aa3.92□□□□□ -1.78
GYPB-205ENST00000505583 FGF7P21781 194 aa3.92□□□□□ -1.78
GYPB-205ENST00000505583 SULT1A1P50225 295 aa3.92□□□□□ -1.78
GYPB-205ENST00000505583 ZNF138P52744 262 aa3.92□□□□□ -1.78
GYPB-205ENST00000505583 LINC00310P59036 64 aa3.92□□□□□ -1.78
GYPB-205ENST00000505583 S100A10P60903 97 aa3.92□□□□□ -1.78
GYPB-205ENST00000505583 PDE6HQ13956 83 aa3.92□□□□□ -1.78
GYPB-205ENST00000505583 ZNF846Q147U1 533 aa3.92□□□□□ -1.78
GYPB-205ENST00000505583 NFE4Q86UQ8 179 aa3.92□□□□□ -1.78
GYPB-205ENST00000505583 IQCF2Q8IXL9 164 aa3.92□□□□□ -1.78
GYPB-205ENST00000505583 THAP6Q8TBB0 222 aa3.92□□□□□ -1.78
GYPB-205ENST00000505583 PHYHIPLQ96FC7 376 aa3.92□□□□□ -1.78
GYPB-205ENST00000505583 C2orf50Q96LR7 162 aa3.92□□□□□ -1.78
GYPB-205ENST00000505583 NPCDR1Q9BY65 106 aa3.92□□□□□ -1.78
GYPB-205ENST00000505583 LYRM2Q9NU23 88 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms