RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 PPP1R1CQ8WVI7 109 aa13.75□□□□□ -0.21
UBE2D3-220ENST00000505307 PHYHIPLQ96FC7 376 aa13.75□□□□□ -0.21
UBE2D3-220ENST00000505307 KRTAP4-5Q9BYR2 181 aa13.75□□□□□ -0.21
UBE2D3-220ENST00000505307 RANP62826 216 aaKnown RBP13.74□□□□□ -0.21
UBE2D3-220ENST00000505307 ZNF266Q14584 549 aa13.74□□□□□ -0.21
UBE2D3-220ENST00000505307 SPATA12Q7Z6I5 190 aa13.74□□□□□ -0.21
UBE2D3-220ENST00000505307 MARVELD1Q9BSK0 173 aa13.74□□□□□ -0.21
UBE2D3-220ENST00000505307 TP53TG3Q9ULZ0 132 aa13.74□□□□□ -0.21
UBE2D3-220ENST00000505307 SIVA1O15304 175 aa13.73□□□□□ -0.21
UBE2D3-220ENST00000505307 IFNA5P01569 189 aa13.73□□□□□ -0.21
UBE2D3-220ENST00000505307 H2BFSP57053 126 aa13.73□□□□□ -0.21
UBE2D3-220ENST00000505307 UBE2L3P68036 154 aaKnown RBP13.73□□□□□ -0.21
UBE2D3-220ENST00000505307 KHDC3LQ587J8 217 aa13.73□□□□□ -0.21
UBE2D3-220ENST00000505307 FFAR4Q5NUL3 377 aa13.73□□□□□ -0.21
UBE2D3-220ENST00000505307 SCGB1C1Q8TD33 95 aa13.73□□□□□ -0.21
UBE2D3-220ENST00000505307 MRPL16Q9NX20 251 aaKnown RBP13.73□□□□□ -0.21
UBE2D3-220ENST00000505307 HSPB11Q9Y547 144 aa13.73□□□□□ -0.21
UBE2D3-220ENST00000505307 HSPG2P98160 4391 aa13.73□□□□□ -0.21
UBE2D3-220ENST00000505307 MPC2O95563 127 aa13.72□□□□□ -0.21
UBE2D3-220ENST00000505307 MRPL23Q16540 153 aaKnown RBP13.72□□□□□ -0.21
UBE2D3-220ENST00000505307 Q8TAT8 98 aa13.72□□□□□ -0.21
UBE2D3-220ENST00000505307 TMED6Q8WW62 240 aa13.72□□□□□ -0.21
UBE2D3-220ENST00000505307 HHLA3Q9XRX5 114 aa13.72□□□□□ -0.21
UBE2D3-220ENST00000505307 SSNA1O43805 119 aa13.71□□□□□ -0.21
UBE2D3-220ENST00000505307 CRYBA4P53673 196 aa13.71□□□□□ -0.21
UBE2D3-220ENST00000505307 IFITM3Q01628 133 aa13.71□□□□□ -0.21
UBE2D3-220ENST00000505307 Q6AWC8 147 aa13.71□□□□□ -0.21
UBE2D3-220ENST00000505307 SPXQ9BT56 116 aa13.71□□□□□ -0.21
UBE2D3-220ENST00000505307 LRP1BQ9NZR2 4599 aa13.7□□□□□ -0.22
UBE2D3-220ENST00000505307 DIRC3C9JPN6 131 aa13.7□□□□□ -0.22
UBE2D3-220ENST00000505307 IGHV3-53P01767 116 aa13.7□□□□□ -0.22
UBE2D3-220ENST00000505307 RPL12P30050 165 aaKnown RBP13.7□□□□□ -0.22
UBE2D3-220ENST00000505307 DEFA1P59665 94 aa13.7□□□□□ -0.22
UBE2D3-220ENST00000505307 DEFA3P59666 94 aa13.7□□□□□ -0.22
UBE2D3-220ENST00000505307 FHL2Q14192 279 aa13.7□□□□□ -0.22
UBE2D3-220ENST00000505307 Q6ZQT7 251 aa13.7□□□□□ -0.22
UBE2D3-220ENST00000505307 IQCF2Q8IXL9 164 aa13.7□□□□□ -0.22
UBE2D3-220ENST00000505307 ARL6IP6Q8N6S5 226 aa13.7□□□□□ -0.22
UBE2D3-220ENST00000505307 PTTG2Q9NZH5 202 aa13.7□□□□□ -0.22
UBE2D3-220ENST00000505307 TRGV11A0A075B6L2 103 aa13.69□□□□□ -0.22
UBE2D3-220ENST00000505307 NXPH4O95158 308 aa13.69□□□□□ -0.22
UBE2D3-220ENST00000505307 LINC00315P59091 139 aa13.69□□□□□ -0.22
UBE2D3-220ENST00000505307 FAM74A1Q5RGS3 127 aa13.69□□□□□ -0.22
UBE2D3-220ENST00000505307 FAM159AQ6UWV7 190 aa13.69□□□□□ -0.22
UBE2D3-220ENST00000505307 OTORQ9NRC9 128 aa13.69□□□□□ -0.22
UBE2D3-220ENST00000505307 TRGV4A0A0C4DH28 118 aa13.68□□□□□ -0.22
UBE2D3-220ENST00000505307 MUC21Q5SSG8 566 aa13.68□□□□□ -0.22
UBE2D3-220ENST00000505307 NEGR1Q7Z3B1 354 aa13.68□□□□□ -0.22
UBE2D3-220ENST00000505307 MAPKAPK5-AS1Q8N8E1 139 aa13.68□□□□□ -0.22
UBE2D3-220ENST00000505307 CMTM2Q8TAZ6 248 aa13.68□□□□□ -0.22
UBE2D3-220ENST00000505307 RASL10AQ92737 203 aa13.68□□□□□ -0.22
UBE2D3-220ENST00000505307 C8orf49Q96NF6 230 aa13.68□□□□□ -0.22
UBE2D3-220ENST00000505307 ACOT6Q3I5F7 207 aaPredicted RBP13.67□□□□□ -0.22
UBE2D3-220ENST00000505307 LYPD5Q6UWN5 251 aa13.67□□□□□ -0.22
UBE2D3-220ENST00000505307 PQLC2Q6ZP29 291 aa13.67□□□□□ -0.22
UBE2D3-220ENST00000505307 OR10G4Q8NGN3 311 aa13.67□□□□□ -0.22
UBE2D3-220ENST00000505307 MDFICQ9P1T7 246 aa13.67□□□□□ -0.22
UBE2D3-220ENST00000505307 TRAV9-2A0A087WT02 112 aa13.66□□□□□ -0.22
UBE2D3-220ENST00000505307 A6NHS1 94 aa13.66□□□□□ -0.22
UBE2D3-220ENST00000505307 K7EP13 123 aa13.66□□□□□ -0.22
UBE2D3-220ENST00000505307 ORM1P02763 201 aa13.66□□□□□ -0.22
UBE2D3-220ENST00000505307 TDRG1Q3Y452 100 aa13.66□□□□□ -0.22
UBE2D3-220ENST00000505307 Q6ZRN7 208 aaPredicted RBP13.66□□□□□ -0.22
UBE2D3-220ENST00000505307 NFE4Q86UQ8 179 aa13.66□□□□□ -0.22
UBE2D3-220ENST00000505307 HYLS1Q96M11 299 aa13.66□□□□□ -0.22
UBE2D3-220ENST00000505307 SMIM3Q9BZL3 60 aa13.66□□□□□ -0.22
UBE2D3-220ENST00000505307 MBD2Q9UBB5 411 aa13.66□□□□□ -0.22
UBE2D3-220ENST00000505307 A0A1W2PPV4 95 aa13.65□□□□□ -0.22
UBE2D3-220ENST00000505307 PGPA6NDG6 321 aa13.65□□□□□ -0.22
UBE2D3-220ENST00000505307 EREGO14944 169 aa13.65□□□□□ -0.22
UBE2D3-220ENST00000505307 KRTAP10-2P60368 255 aa13.65□□□□□ -0.22
UBE2D3-220ENST00000505307 TMEM183BQ1AE95 376 aa13.65□□□□□ -0.22
UBE2D3-220ENST00000505307 TMEM183AQ8IXX5 376 aa13.65□□□□□ -0.22
UBE2D3-220ENST00000505307 PCNPQ8WW12 178 aaKnown RBP13.65□□□□□ -0.22
UBE2D3-220ENST00000505307 SRIP30626 198 aa13.64□□□□□ -0.23
UBE2D3-220ENST00000505307 Q8N1X5 172 aa13.64□□□□□ -0.23
UBE2D3-220ENST00000505307 PGPEP1Q9NXJ5 209 aa13.64□□□□□ -0.23
UBE2D3-220ENST00000505307 TRAV21A0A0B4J279 112 aa13.63□□□□□ -0.23
UBE2D3-220ENST00000505307 K7EQD1 137 aa13.63□□□□□ -0.23
UBE2D3-220ENST00000505307 ZNF479Q96JC4 524 aa13.63□□□□□ -0.23
UBE2D3-220ENST00000505307 LY96Q9Y6Y9 160 aa13.63□□□□□ -0.23
UBE2D3-220ENST00000505307 TRAV4A0A0B4J268 109 aa13.62□□□□□ -0.23
UBE2D3-220ENST00000505307 M0R2P5 195 aa13.62□□□□□ -0.23
UBE2D3-220ENST00000505307 ERVFC1-1P60608 527 aa13.62□□□□□ -0.23
UBE2D3-220ENST00000505307 TXNDC17Q9BRA2 123 aa13.62□□□□□ -0.23
UBE2D3-220ENST00000505307 C9JCJ5 164 aa13.61□□□□□ -0.23
UBE2D3-220ENST00000505307 SFTA3P0C7M3 94 aa13.61□□□□□ -0.23
UBE2D3-220ENST00000505307 GYPEP15421 78 aa13.61□□□□□ -0.23
UBE2D3-220ENST00000505307 GOLT1AQ6ZVE7 132 aa13.61□□□□□ -0.23
UBE2D3-220ENST00000505307 SH2D6Q7Z4S9 175 aa13.61□□□□□ -0.23
UBE2D3-220ENST00000505307 KCNS1Q96KK3 526 aa13.61□□□□□ -0.23
UBE2D3-220ENST00000505307 WFDC1Q9HC57 220 aa13.61□□□□□ -0.23
UBE2D3-220ENST00000505307 NAGKQ9UJ70 344 aa13.61□□□□□ -0.23
UBE2D3-220ENST00000505307 RPH3ALQ9UNE2 315 aa13.61□□□□□ -0.23
UBE2D3-220ENST00000505307 SERTM2A0A1B0GWG4 89 aa13.6□□□□□ -0.23
UBE2D3-220ENST00000505307 EVI2AP22794 236 aa13.6□□□□□ -0.23
UBE2D3-220ENST00000505307 CDPF1Q6NVV7 123 aa13.6□□□□□ -0.23
UBE2D3-220ENST00000505307 OR4C5Q8NGB2 326 aa13.6□□□□□ -0.23
UBE2D3-220ENST00000505307 OR10G9Q8NGN4 311 aa13.6□□□□□ -0.23
UBE2D3-220ENST00000505307 OR10G7Q8NGN6 311 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 230.8 ms