RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 CEACAM3P40198 252 aa9.15□□□□□ -0.94
UBE3D-206ENST00000505226 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.15□□□□□ -0.94
UBE3D-206ENST00000505226 AGPAT4-IT1Q9H0P7 198 aa9.15□□□□□ -0.94
UBE3D-206ENST00000505226 ZFAND3Q9H8U3 227 aa9.15□□□□□ -0.94
UBE3D-206ENST00000505226 NXT2Q9NPJ8 142 aaKnown RBP9.15□□□□□ -0.94
UBE3D-206ENST00000505226 HIGD1BQ9P298 99 aa9.15□□□□□ -0.94
UBE3D-206ENST00000505226 AGRNO00468 2067 aa9.15□□□□□ -0.95
UBE3D-206ENST00000505226 CLPSL1A2RUU4 121 aa9.14□□□□□ -0.95
UBE3D-206ENST00000505226 BUB3O43684 328 aa9.14□□□□□ -0.95
UBE3D-206ENST00000505226 SMIM17P0DL12 118 aa9.14□□□□□ -0.95
UBE3D-206ENST00000505226 FABP2P12104 132 aa9.14□□□□□ -0.95
UBE3D-206ENST00000505226 TMEM160Q9NX00 188 aa9.14□□□□□ -0.95
UBE3D-206ENST00000505226 MRPL35Q9NZE8 188 aaKnown RBP9.14□□□□□ -0.95
UBE3D-206ENST00000505226 TMEM238C9JI98 176 aa9.14□□□□□ -0.95
UBE3D-206ENST00000505226 VMO1Q7Z5L0 202 aa9.14□□□□□ -0.95
UBE3D-206ENST00000505226 NRACQ8N912 160 aa9.14□□□□□ -0.95
UBE3D-206ENST00000505226 OR5A1Q8NGJ0 315 aa9.14□□□□□ -0.95
UBE3D-206ENST00000505226 IGHV3-49A0A0A0MS15 119 aa9.14□□□□□ -0.95
UBE3D-206ENST00000505226 IGHV7-4-1A0A0J9YVY3 117 aa9.14□□□□□ -0.95
UBE3D-206ENST00000505226 FAM90A27PA6NNH2 459 aa9.14□□□□□ -0.95
UBE3D-206ENST00000505226 CLEC3BP05452 202 aa9.14□□□□□ -0.95
UBE3D-206ENST00000505226 TMEM11P17152 192 aa9.14□□□□□ -0.95
UBE3D-206ENST00000505226 C15orf32Q32M92 178 aa9.14□□□□□ -0.95
UBE3D-206ENST00000505226 Q8N8P6 123 aa9.14□□□□□ -0.95
UBE3D-206ENST00000505226 MSRB2Q9Y3D2 182 aa9.14□□□□□ -0.95
UBE3D-206ENST00000505226 TRAV8-2A0A0B4J237 113 aa9.13□□□□□ -0.95
UBE3D-206ENST00000505226 NHP2Q9NX24 153 aaKnown RBP9.13□□□□□ -0.95
UBE3D-206ENST00000505226 TEX48A0A1B0GUV7 120 aa9.13□□□□□ -0.95
UBE3D-206ENST00000505226 Q8N9W7 124 aa9.13□□□□□ -0.95
UBE3D-206ENST00000505226 ZNF502Q8TBZ5 544 aa9.13□□□□□ -0.95
UBE3D-206ENST00000505226 LINC01548A6NM66 108 aa9.13□□□□□ -0.95
UBE3D-206ENST00000505226 DPM2O94777 84 aa9.13□□□□□ -0.95
UBE3D-206ENST00000505226 EFNA4P52798 201 aa9.13□□□□□ -0.95
UBE3D-206ENST00000505226 CEND1Q8N111 149 aa9.13□□□□□ -0.95
UBE3D-206ENST00000505226 TM2D2Q9BX73 214 aa9.13□□□□□ -0.95
UBE3D-206ENST00000505226 M0R1W7 72 aa9.12□□□□□ -0.95
UBE3D-206ENST00000505226 SPRY2O43597 315 aa9.12□□□□□ -0.95
UBE3D-206ENST00000505226 ZNF207O43670 478 aaKnown RBP9.12□□□□□ -0.95
UBE3D-206ENST00000505226 ZFP36P26651 326 aaKnown RBP9.12□□□□□ -0.95
UBE3D-206ENST00000505226 EBI3Q14213 229 aa9.12□□□□□ -0.95
UBE3D-206ENST00000505226 CCDC140Q96MF4 163 aa9.11□□□□□ -0.95
UBE3D-206ENST00000505226 VKORC1Q9BQB6 163 aa9.11□□□□□ -0.95
UBE3D-206ENST00000505226 SPTA1P02549 2419 aa9.11□□□□□ -0.95
UBE3D-206ENST00000505226 RPL24P83731 157 aaKnown RBP9.11□□□□□ -0.95
UBE3D-206ENST00000505226 IGF1P05019 195 aa9.11□□□□□ -0.95
UBE3D-206ENST00000505226 ECSCRQ19T08 205 aa9.11□□□□□ -0.95
UBE3D-206ENST00000505226 AJUBAQ96IF1 538 aa9.11□□□□□ -0.95
UBE3D-206ENST00000505226 COL12A1Q99715 3063 aa9.1□□□□□ -0.95
UBE3D-206ENST00000505226 G3V318 75 aa9.1□□□□□ -0.95
UBE3D-206ENST00000505226 ATP5LO75964 103 aa9.1□□□□□ -0.95
UBE3D-206ENST00000505226 PRR9Q5T870 116 aa9.1□□□□□ -0.95
UBE3D-206ENST00000505226 UFC1Q9Y3C8 167 aa9.1□□□□□ -0.95
UBE3D-206ENST00000505226 RBAKDNA6NC62 111 aa9.1□□□□□ -0.95
UBE3D-206ENST00000505226 WFDC2Q14508 124 aa9.1□□□□□ -0.95
UBE3D-206ENST00000505226 LAGE3Q14657 143 aa9.1□□□□□ -0.95
UBE3D-206ENST00000505226 CLEC19AQ6UXS0 136 aa9.1□□□□□ -0.95
UBE3D-206ENST00000505226 IGLL5B9A064 214 aa9.09□□□□□ -0.95
UBE3D-206ENST00000505226 E9PLD3 99 aa9.09□□□□□ -0.95
UBE3D-206ENST00000505226 ATP6V0E1O15342 81 aa9.09□□□□□ -0.95
UBE3D-206ENST00000505226 PRSS47A8MTI9 375 aa9.09□□□□□ -0.95
UBE3D-206ENST00000505226 GOSR1O95249 250 aa9.09□□□□□ -0.95
UBE3D-206ENST00000505226 SMPXQ9UHP9 88 aa9.09□□□□□ -0.95
UBE3D-206ENST00000505226 PTPRQQ9UMZ3 2332 aa9.09□□□□□ -0.95
UBE3D-206ENST00000505226 A0A087WX48 190 aa9.08□□□□□ -0.96
UBE3D-206ENST00000505226 CCDC144NLQ6NUI1 221 aa9.08□□□□□ -0.96
UBE3D-206ENST00000505226 C8orf86Q6ZUL3 223 aa9.08□□□□□ -0.96
UBE3D-206ENST00000505226 FAM110DQ8TAY7 271 aaPredicted RBP9.08□□□□□ -0.96
UBE3D-206ENST00000505226 CLEC2AQ6UVW9 174 aa9.08□□□□□ -0.96
UBE3D-206ENST00000505226 AMTNQ6UX39 209 aa9.08□□□□□ -0.96
UBE3D-206ENST00000505226 MYOZ3Q8TDC0 251 aa9.08□□□□□ -0.96
UBE3D-206ENST00000505226 TIMD4Q96H15 378 aa9.08□□□□□ -0.96
UBE3D-206ENST00000505226 C12orf74Q32Q52 190 aa9.07□□□□□ -0.96
UBE3D-206ENST00000505226 MTURNQ8N3F0 131 aa9.07□□□□□ -0.96
UBE3D-206ENST00000505226 PTPRZ1P23471 2315 aaPredicted RBP9.07□□□□□ -0.96
UBE3D-206ENST00000505226 H3BMG7 143 aa9.07□□□□□ -0.96
UBE3D-206ENST00000505226 H3BVH4 76 aa9.07□□□□□ -0.96
UBE3D-206ENST00000505226 C11orf71Q6IPW1 123 aa9.07□□□□□ -0.96
UBE3D-206ENST00000505226 FOXI2Q6ZQN5 318 aa9.07□□□□□ -0.96
UBE3D-206ENST00000505226 KLK15Q9H2R5 256 aa9.07□□□□□ -0.96
UBE3D-206ENST00000505226 ATRXP46100 2492 aa9.07□□□□□ -0.96
UBE3D-206ENST00000505226 HLA-DRB4P13762 266 aa9.07□□□□□ -0.96
UBE3D-206ENST00000505226 DEFB1P60022 68 aa9.07□□□□□ -0.96
UBE3D-206ENST00000505226 SRSF1Q07955 248 aaKnown RBP eCLIP9.07□□□□□ -0.96
UBE3D-206ENST00000505226 TCF15Q12870 199 aa9.07□□□□□ -0.96
UBE3D-206ENST00000505226 PSMG4Q5JS54 123 aa9.07□□□□□ -0.96
UBE3D-206ENST00000505226 C20orf173Q96LM9 149 aa9.07□□□□□ -0.96
UBE3D-206ENST00000505226 SLC50A1Q9BRV3 221 aa9.07□□□□□ -0.96
UBE3D-206ENST00000505226 HLA-DRB4X5D2U9 266 aa9.07□□□□□ -0.96
UBE3D-206ENST00000505226 SPTBN1Q01082 2364 aaKnown RBP9.06□□□□□ -0.96
UBE3D-206ENST00000505226 IGHV4-4A0A075B6R2 117 aa9.06□□□□□ -0.96
UBE3D-206ENST00000505226 J3KRW8 73 aa9.06□□□□□ -0.96
UBE3D-206ENST00000505226 TMEM78Q5T7P6 136 aa9.06□□□□□ -0.96
UBE3D-206ENST00000505226 SPANXN1Q5VSR9 72 aa9.06□□□□□ -0.96
UBE3D-206ENST00000505226 SH2D6Q7Z4S9 175 aa9.06□□□□□ -0.96
UBE3D-206ENST00000505226 SPANXB1Q9NS25 103 aaPredicted RBP9.06□□□□□ -0.96
UBE3D-206ENST00000505226 LCNL1Q6ZST4 164 aa9.06□□□□□ -0.96
UBE3D-206ENST00000505226 SIRPDQ9H106 197 aa9.06□□□□□ -0.96
UBE3D-206ENST00000505226 TRBV7-3A0A075B6L6 115 aa9.06□□□□□ -0.96
UBE3D-206ENST00000505226 SCGB2A1O75556 95 aa9.06□□□□□ -0.96
UBE3D-206ENST00000505226 C9orf47Q6ZRZ4 202 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms