RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 SPANXN5Q5MJ07 72 aa2.35□□□□□ -2.03
USP46-205ENST00000504078 GPR107Q5VW38 600 aa2.35□□□□□ -2.03
USP46-205ENST00000504078 LCN15Q6UWW0 184 aa2.35□□□□□ -2.03
USP46-205ENST00000504078 DAZ4Q86SG3 579 aaKnown RBP2.35□□□□□ -2.03
USP46-205ENST00000504078 EIF4E3Q8N5X7 224 aaKnown RBP2.35□□□□□ -2.03
USP46-205ENST00000504078 LINC00469Q8N7U9 141 aa2.35□□□□□ -2.03
USP46-205ENST00000504078 OR10P1Q8NGE3 313 aa2.35□□□□□ -2.03
USP46-205ENST00000504078 ZFAND1Q8TCF1 268 aa2.35□□□□□ -2.03
USP46-205ENST00000504078 GPR82Q96P67 336 aa2.35□□□□□ -2.03
USP46-205ENST00000504078 C20orf144Q9BQM9 153 aa2.35□□□□□ -2.03
USP46-205ENST00000504078 RTBDNQ9BSG5 229 aaPredicted RBP2.35□□□□□ -2.03
USP46-205ENST00000504078 SLC25A31Q9H0C2 315 aa2.35□□□□□ -2.03
USP46-205ENST00000504078 DAZ3Q9NR90 486 aaKnown RBP2.35□□□□□ -2.03
USP46-205ENST00000504078 LPAP08519 4548 aa2.35□□□□□ -2.03
USP46-205ENST00000504078 IGKV2D-24A0A075B6R9 120 aa2.34□□□□□ -2.03
USP46-205ENST00000504078 C9JCJ5 164 aa2.34□□□□□ -2.03
USP46-205ENST00000504078 H3BQ15 152 aa2.34□□□□□ -2.03
USP46-205ENST00000504078 SSSCA1O60232 199 aa2.34□□□□□ -2.03
USP46-205ENST00000504078 COX7A2P2O60397 106 aa2.34□□□□□ -2.03
USP46-205ENST00000504078 HYPMO75409 117 aa2.34□□□□□ -2.03
USP46-205ENST00000504078 AKR1C4P17516 323 aa2.34□□□□□ -2.03
USP46-205ENST00000504078 TNFSF8P32971 234 aa2.34□□□□□ -2.03
USP46-205ENST00000504078 GPX4P36969 197 aaPredicted RBP2.34□□□□□ -2.03
USP46-205ENST00000504078 CCR6P51684 374 aa2.34□□□□□ -2.03
USP46-205ENST00000504078 GABARAPL2P60520 117 aa2.34□□□□□ -2.03
USP46-205ENST00000504078 RAB11AP62491 216 aa2.34□□□□□ -2.03
USP46-205ENST00000504078 OPCMLQ14982 345 aa2.34□□□□□ -2.03
USP46-205ENST00000504078 TMEM183BQ1AE95 376 aa2.34□□□□□ -2.03
USP46-205ENST00000504078 GGNBP1Q5YKI7 109 aa2.34□□□□□ -2.03
USP46-205ENST00000504078 FAM122CQ6P4D5 195 aa2.34□□□□□ -2.03
USP46-205ENST00000504078 PATE2Q6UY27 113 aa2.34□□□□□ -2.03
USP46-205ENST00000504078 NOXA1Q86UR1 476 aa2.34□□□□□ -2.03
USP46-205ENST00000504078 TMEM183AQ8IXX5 376 aa2.34□□□□□ -2.03
USP46-205ENST00000504078 EXOC3-AS1Q8N2X6 119 aa2.34□□□□□ -2.03
USP46-205ENST00000504078 OR4D5Q8NGN0 318 aa2.34□□□□□ -2.03
USP46-205ENST00000504078 TMEM37Q8WXS4 190 aa2.34□□□□□ -2.03
USP46-205ENST00000504078 RPL36ALQ969Q0 106 aaKnown RBP2.34□□□□□ -2.03
USP46-205ENST00000504078 TXNDC17Q9BRA2 123 aa2.34□□□□□ -2.03
USP46-205ENST00000504078 SLC50A1Q9BRV3 221 aa2.34□□□□□ -2.03
USP46-205ENST00000504078 ARV1Q9H2C2 271 aa2.34□□□□□ -2.03
USP46-205ENST00000504078 U3KQ87 197 aa2.34□□□□□ -2.03
USP46-205ENST00000504078 IGHV1OR15-1A0A075B7D0 117 aa2.33□□□□□ -2.04
USP46-205ENST00000504078 TRAV8-6A0A0B4J262 113 aa2.33□□□□□ -2.04
USP46-205ENST00000504078 SMIM31A0A1B0GVY4 71 aa2.33□□□□□ -2.04
USP46-205ENST00000504078 KLLNB2CW77 178 aa2.33□□□□□ -2.04
USP46-205ENST00000504078 F6UZH7 168 aa2.33□□□□□ -2.04
USP46-205ENST00000504078 MPDU1O75352 247 aa2.33□□□□□ -2.04
USP46-205ENST00000504078 HLA-DQA1P01909 254 aa2.33□□□□□ -2.04
USP46-205ENST00000504078 SLC25A5P05141 298 aaKnown RBP2.33□□□□□ -2.04
USP46-205ENST00000504078 METTL15P1P0C7V9 234 aa2.33□□□□□ -2.04
USP46-205ENST00000504078 CHTF8P0CG12 524 aa2.33□□□□□ -2.04
USP46-205ENST00000504078 IGLC2P0DOY2 106 aa2.33□□□□□ -2.04
USP46-205ENST00000504078 PYYP10082 97 aa2.33□□□□□ -2.04
USP46-205ENST00000504078 TAS2R19P59542 299 aa2.33□□□□□ -2.04
USP46-205ENST00000504078 VBP1P61758 197 aa2.33□□□□□ -2.04
USP46-205ENST00000504078 VWC2Q2TAL6 325 aa2.33□□□□□ -2.04
USP46-205ENST00000504078 IBA57Q5T440 356 aaKnown RBP2.33□□□□□ -2.04
USP46-205ENST00000504078 CLPSL2Q6UWE3 100 aa2.33□□□□□ -2.04
USP46-205ENST00000504078 LINC00305Q7Z4B0 112 aa2.33□□□□□ -2.04
USP46-205ENST00000504078 ZFAND2AQ8N6M9 145 aa2.33□□□□□ -2.04
USP46-205ENST00000504078 OR51S1Q8NGJ8 323 aa2.33□□□□□ -2.04
USP46-205ENST00000504078 TERB2Q8NHR7 220 aa2.33□□□□□ -2.04
USP46-205ENST00000504078 RAB2BQ8WUD1 216 aa2.33□□□□□ -2.04
USP46-205ENST00000504078 MRPL32Q9BYC8 188 aaKnown RBP2.33□□□□□ -2.04
USP46-205ENST00000504078 TRAV4A0A0B4J268 109 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 A0A0B4J2A0 478 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 GAGE12JA6NER3 117 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 DISC1C4P0D8 188 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 EIF3GO75821 320 aaKnown RBP eCLIP2.32□□□□□ -2.04
USP46-205ENST00000504078 APOA1P02647 267 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 ORM1P02763 201 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 S100A9P06702 114 aaKnown RBP2.32□□□□□ -2.04
USP46-205ENST00000504078 GPX1P07203 203 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 HOXB5P09067 269 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 GATA1P15976 413 aaPredicted RBP2.32□□□□□ -2.04
USP46-205ENST00000504078 CXCL2P19875 107 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 CAV2P51636 162 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 POLR2GP62487 172 aaKnown RBP eCLIP2.32□□□□□ -2.04
USP46-205ENST00000504078 GAGE1Q13065 139 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 GAGE4Q13068 117 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 GAGE5Q13069 117 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 ANXA2RQ3ZCQ2 193 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 BPIFA4PQ86YQ2 179 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 CLVS1Q8IUQ0 354 aaPredicted RBP2.32□□□□□ -2.04
USP46-205ENST00000504078 SLC7A5P1Q8MH63 180 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 TMEM229BQ8NBD8 167 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 OR4C5Q8NGB2 326 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 OR10G4Q8NGN3 311 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 ATP6V0E2Q8NHE4 81 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 UBE2WQ96B02 151 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 ODF3Q96PU9 254 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 MGST2Q99735 147 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 TPPP3Q9BW30 176 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 TM2D2Q9BX73 214 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 SRRQ9GZT4 340 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 NAA50Q9GZZ1 169 aaKnown RBP2.32□□□□□ -2.04
USP46-205ENST00000504078 AGPAT4-IT1Q9H0P7 198 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 DPH3P1Q9H4G8 78 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 MCUBQ9NWR8 336 aa2.32□□□□□ -2.04
USP46-205ENST00000504078 CCDC59Q9P031 241 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms