RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 LINC00173Q6ZV60 143 aa17.08■□□□□ 0.32
PCDH1-204ENST00000503492 DAZ1Q9NQZ3 744 aaKnown RBP17.08■□□□□ 0.32
PCDH1-204ENST00000503492 MSRB1Q9NZV6 116 aa17.08■□□□□ 0.32
PCDH1-204ENST00000503492 MRPL51Q4U2R6 128 aaKnown RBP17.07■□□□□ 0.32
PCDH1-204ENST00000503492 Q6ZQT7 251 aa17.07■□□□□ 0.32
PCDH1-204ENST00000503492 VPREB3Q9UKI3 123 aa17.07■□□□□ 0.32
PCDH1-204ENST00000503492 EDN2P20800 178 aa17.07■□□□□ 0.32
PCDH1-204ENST00000503492 RPL11P62913 178 aaKnown RBP17.07■□□□□ 0.32
PCDH1-204ENST00000503492 FOXE3Q13461 319 aa17.07■□□□□ 0.32
PCDH1-204ENST00000503492 Q6YL49 198 aa17.07■□□□□ 0.32
PCDH1-204ENST00000503492 SPATA12Q7Z6I5 190 aa17.07■□□□□ 0.32
PCDH1-204ENST00000503492 SELENOKQ9Y6D0 94 aa17.06■□□□□ 0.32
PCDH1-204ENST00000503492 DEFB1P60022 68 aa17.06■□□□□ 0.32
PCDH1-204ENST00000503492 PRR9Q5T870 116 aa17.06■□□□□ 0.32
PCDH1-204ENST00000503492 ATOH7Q8N100 152 aa17.06■□□□□ 0.32
PCDH1-204ENST00000503492 SMPXQ9UHP9 88 aa17.06■□□□□ 0.32
PCDH1-204ENST00000503492 CENPEQ02224 2701 aa17.06■□□□□ 0.32
PCDH1-204ENST00000503492 IGKV3-7A0A075B6H7 116 aa17.05■□□□□ 0.32
PCDH1-204ENST00000503492 LEPROTL1O95214 131 aa17.05■□□□□ 0.32
PCDH1-204ENST00000503492 Q96MF0 132 aa17.05■□□□□ 0.32
PCDH1-204ENST00000503492 PRELID3AQ96N28 172 aa17.05■□□□□ 0.32
PCDH1-204ENST00000503492 ZANQ9Y493 2812 aa17.05■□□□□ 0.32
PCDH1-204ENST00000503492 RAB4AP20338 218 aa17.04■□□□□ 0.32
PCDH1-204ENST00000503492 SPATA45Q537H7 98 aa17.04■□□□□ 0.32
PCDH1-204ENST00000503492 ORMDL3Q8N138 153 aa17.04■□□□□ 0.32
PCDH1-204ENST00000503492 MIEN1Q9BRT3 115 aa17.04■□□□□ 0.32
PCDH1-204ENST00000503492 TMEM70Q9BUB7 260 aa17.04■□□□□ 0.32
PCDH1-204ENST00000503492 TMEM191AQ9H0A3 160 aa17.04■□□□□ 0.32
PCDH1-204ENST00000503492 FAM106AQ4KMX7 169 aa17.04■□□□□ 0.32
PCDH1-204ENST00000503492 PRSS3P2Q8NHM4 247 aa17.04■□□□□ 0.32
PCDH1-204ENST00000503492 LENEPQ9Y5L5 61 aa17.04■□□□□ 0.32
PCDH1-204ENST00000503492 TMEM89A2RUT3 159 aa17.03■□□□□ 0.32
PCDH1-204ENST00000503492 K7EMT4 169 aa17.03■□□□□ 0.32
PCDH1-204ENST00000503492 OVOL1O14753 267 aa17.03■□□□□ 0.32
PCDH1-204ENST00000503492 KRTAP1-3Q8IUG1 177 aa17.03■□□□□ 0.32
PCDH1-204ENST00000503492 LINC00477Q96M19 166 aa17.03■□□□□ 0.32
PCDH1-204ENST00000503492 AP5S1Q9NUS5 200 aa17.03■□□□□ 0.32
PCDH1-204ENST00000503492 RPLP1P05386 114 aaKnown RBP17.03■□□□□ 0.32
PCDH1-204ENST00000503492 OR5AL1P0C617 328 aa17.03■□□□□ 0.32
PCDH1-204ENST00000503492 PRRC2AP48634 2157 aaKnown RBP17.03■□□□□ 0.32
PCDH1-204ENST00000503492 ABCA12Q86UK0 2595 aa17.03■□□□□ 0.32
PCDH1-204ENST00000503492 NAV2Q8IVL1 2488 aa17.02■□□□□ 0.32
PCDH1-204ENST00000503492 IFI27P40305 119 aaPredicted RBP17.02■□□□□ 0.32
PCDH1-204ENST00000503492 CYB5R2Q6BCY4 276 aa17.02■□□□□ 0.32
PCDH1-204ENST00000503492 ZNF705AQ6ZN79 300 aaPredicted RBP17.02■□□□□ 0.32
PCDH1-204ENST00000503492 OR10J6PQ8NGY7 276 aa17.02■□□□□ 0.32
PCDH1-204ENST00000503492 RNF185Q96GF1 192 aa17.02■□□□□ 0.32
PCDH1-204ENST00000503492 SMKR1H3BMG3 65 aa17.02■□□□□ 0.31
PCDH1-204ENST00000503492 HOXA3O43365 443 aaPredicted RBP17.02■□□□□ 0.31
PCDH1-204ENST00000503492 MAJINQ3KP22 176 aa17.02■□□□□ 0.31
PCDH1-204ENST00000503492 FA2HQ7L5A8 372 aa17.02■□□□□ 0.31
PCDH1-204ENST00000503492 ZNF702PQ9H963 129 aa17.02■□□□□ 0.31
PCDH1-204ENST00000503492 SIGLEC8Q9NYZ4 499 aa17.02■□□□□ 0.31
PCDH1-204ENST00000503492 LOC389332A0A1B0GUA5 103 aa17.01■□□□□ 0.31
PCDH1-204ENST00000503492 CRXO43186 299 aaPredicted RBP17.01■□□□□ 0.31
PCDH1-204ENST00000503492 SRD5A1P18405 259 aa17.01■□□□□ 0.31
PCDH1-204ENST00000503492 ZFAND2AQ8N6M9 145 aa17.01■□□□□ 0.31
PCDH1-204ENST00000503492 SYS1-DBNDD2H3BUS1 97 aa17.01■□□□□ 0.31
PCDH1-204ENST00000503492 EREGO14944 169 aa17.01■□□□□ 0.31
PCDH1-204ENST00000503492 F6UB75 175 aa17■□□□□ 0.31
PCDH1-204ENST00000503492 CKS2P33552 79 aa17■□□□□ 0.31
PCDH1-204ENST00000503492 J3KRW8 73 aa17■□□□□ 0.31
PCDH1-204ENST00000503492 NCR2O95944 276 aa17■□□□□ 0.31
PCDH1-204ENST00000503492 SNHG12Q9BXW3 62 aa17■□□□□ 0.31
PCDH1-204ENST00000503492 NPYP01303 97 aa16.99■□□□□ 0.31
PCDH1-204ENST00000503492 OR8A1Q8NGG7 326 aa16.99■□□□□ 0.31
PCDH1-204ENST00000503492 OR10AG1Q8NH19 301 aa16.99■□□□□ 0.31
PCDH1-204ENST00000503492 C2orf88Q9BSF0 95 aa16.99■□□□□ 0.31
PCDH1-204ENST00000503492 UFC1Q9Y3C8 167 aa16.98■□□□□ 0.31
PCDH1-204ENST00000503492 TIMM8BQ9Y5J9 83 aaPredicted RBP16.98■□□□□ 0.31
PCDH1-204ENST00000503492 PRSS57Q6UWY2 283 aa16.97■□□□□ 0.31
PCDH1-204ENST00000503492 FAM19A4Q96LR4 140 aa16.97■□□□□ 0.31
PCDH1-204ENST00000503492 LBHQ53QV2 105 aaPredicted RBP16.97■□□□□ 0.31
PCDH1-204ENST00000503492 GAS8-AS1O95177 125 aa16.96■□□□□ 0.31
PCDH1-204ENST00000503492 HSPB8Q9UJY1 196 aa16.96■□□□□ 0.31
PCDH1-204ENST00000503492 DOPEY2Q9Y3R5 2298 aa16.96■□□□□ 0.31
PCDH1-204ENST00000503492 TRAV9-2A0A087WT02 112 aa16.96■□□□□ 0.31
PCDH1-204ENST00000503492 A0A096LNJ9 63 aa16.96■□□□□ 0.31
PCDH1-204ENST00000503492 IGLC3P0DOY3 106 aa16.96■□□□□ 0.31
PCDH1-204ENST00000503492 LURAP1LQ8IV03 231 aa16.96■□□□□ 0.31
PCDH1-204ENST00000503492 MYOZ3Q8TDC0 251 aa16.96■□□□□ 0.31
PCDH1-204ENST00000503492 DCANP1Q8TF63 244 aa16.96■□□□□ 0.31
PCDH1-204ENST00000503492 ELANEP08246 267 aa16.95■□□□□ 0.3
PCDH1-204ENST00000503492 MAP1LC3CQ9BXW4 147 aa16.95■□□□□ 0.3
PCDH1-204ENST00000503492 A0A1B0GV90 55 aa16.95■□□□□ 0.3
PCDH1-204ENST00000503492 SNAI2O43623 268 aa16.95■□□□□ 0.3
PCDH1-204ENST00000503492 OR4C46A6NHA9 309 aa16.94■□□□□ 0.3
PCDH1-204ENST00000503492 M0R143 59 aa16.94■□□□□ 0.3
PCDH1-204ENST00000503492 ZNF747Q9BV97 191 aa16.94■□□□□ 0.3
PCDH1-204ENST00000503492 TRAV21A0A0B4J279 112 aa16.94■□□□□ 0.3
PCDH1-204ENST00000503492 LGALS1P09382 135 aaKnown RBP16.94■□□□□ 0.3
PCDH1-204ENST00000503492 EVI2AP22794 236 aa16.94■□□□□ 0.3
PCDH1-204ENST00000503492 WFDC3Q8IUB2 231 aa16.94■□□□□ 0.3
PCDH1-204ENST00000503492 DUX5Q96PT3 197 aa16.94■□□□□ 0.3
PCDH1-204ENST00000503492 CREBBPQ92793 2442 aa16.94■□□□□ 0.3
PCDH1-204ENST00000503492 PPBPP02775 128 aa16.93■□□□□ 0.3
PCDH1-204ENST00000503492 KIR3DS1Q14943 382 aa16.93■□□□□ 0.3
PCDH1-204ENST00000503492 KLHDC1Q8N7A1 406 aa16.93■□□□□ 0.3
PCDH1-204ENST00000503492 H3BVH4 76 aa16.93■□□□□ 0.3
PCDH1-204ENST00000503492 TCF21O43680 179 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms