RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 NPFFR1Q9GZQ6 430 aa12.67□□□□□ -0.38
VCAN-204ENST00000502527 IGHV4-30-2A0A087WSY4 118 aa12.66□□□□□ -0.38
VCAN-204ENST00000502527 H3BUX3 64 aa12.66□□□□□ -0.38
VCAN-204ENST00000502527 MSMBP08118 114 aa12.66□□□□□ -0.38
VCAN-204ENST00000502527 ORAOV1Q8WV07 137 aa12.66□□□□□ -0.38
VCAN-204ENST00000502527 LENEPQ9Y5L5 61 aa12.66□□□□□ -0.38
VCAN-204ENST00000502527 DPF1Q92782 380 aa12.66□□□□□ -0.38
VCAN-204ENST00000502527 TP73-AS1Q9UF72 201 aa12.66□□□□□ -0.38
VCAN-204ENST00000502527 LINC01546A6NGU7 62 aa12.65□□□□□ -0.38
VCAN-204ENST00000502527 TRBV12-3P01733 135 aa12.65□□□□□ -0.38
VCAN-204ENST00000502527 UNQ9165/PRO28630Q6UXU0 137 aa12.65□□□□□ -0.38
VCAN-204ENST00000502527 SMIM15Q7Z3B0 74 aa12.65□□□□□ -0.38
VCAN-204ENST00000502527 ZNF738Q8NE65 137 aa12.65□□□□□ -0.38
VCAN-204ENST00000502527 IFI27L1Q96BM0 104 aa12.65□□□□□ -0.38
VCAN-204ENST00000502527 NXT2Q9NPJ8 142 aaKnown RBP12.65□□□□□ -0.38
VCAN-204ENST00000502527 ABCA2Q9BZC7 2435 aa12.65□□□□□ -0.38
VCAN-204ENST00000502527 SMAD7O15105 426 aaKnown RBP12.65□□□□□ -0.39
VCAN-204ENST00000502527 TNFRSF6BO95407 300 aa12.65□□□□□ -0.39
VCAN-204ENST00000502527 COX8AP10176 69 aa12.65□□□□□ -0.39
VCAN-204ENST00000502527 FXYD7P58549 80 aa12.65□□□□□ -0.39
VCAN-204ENST00000502527 MPV17L2Q567V2 206 aa12.65□□□□□ -0.39
VCAN-204ENST00000502527 C12orf54Q6X4T0 127 aa12.64□□□□□ -0.39
VCAN-204ENST00000502527 C20orf173Q96LM9 149 aa12.64□□□□□ -0.39
VCAN-204ENST00000502527 NUDT3O95989 172 aa12.63□□□□□ -0.39
VCAN-204ENST00000502527 FOXE3Q13461 319 aa12.63□□□□□ -0.39
VCAN-204ENST00000502527 LINC00477Q96M19 166 aa12.63□□□□□ -0.39
VCAN-204ENST00000502527 COX11Q9Y6N1 276 aa12.63□□□□□ -0.39
VCAN-204ENST00000502527 SVEP1Q4LDE5 3571 aa12.63□□□□□ -0.39
VCAN-204ENST00000502527 IGHV7-4-1A0A0J9YVY3 117 aa12.63□□□□□ -0.39
VCAN-204ENST00000502527 OVOL1O14753 267 aa12.63□□□□□ -0.39
VCAN-204ENST00000502527 PF4V1P10720 104 aa12.63□□□□□ -0.39
VCAN-204ENST00000502527 CACNG7P62955 275 aa12.63□□□□□ -0.39
VCAN-204ENST00000502527 OR1N2Q8NGR9 330 aa12.63□□□□□ -0.39
VCAN-204ENST00000502527 PKD1L2Q7Z442 2459 aa12.63□□□□□ -0.39
VCAN-204ENST00000502527 IGHV4-4A0A075B6R2 117 aa12.62□□□□□ -0.39
VCAN-204ENST00000502527 A0A0G2JLM5 398 aa12.62□□□□□ -0.39
VCAN-204ENST00000502527 GAS8-AS1O95177 125 aa12.62□□□□□ -0.39
VCAN-204ENST00000502527 IGHV3-11P01762 117 aa12.62□□□□□ -0.39
VCAN-204ENST00000502527 BLCAPP62952 87 aa12.62□□□□□ -0.39
VCAN-204ENST00000502527 OR4X2Q8NGF9 303 aa12.62□□□□□ -0.39
VCAN-204ENST00000502527 OR10J6PQ8NGY7 276 aa12.62□□□□□ -0.39
VCAN-204ENST00000502527 B4DSR2 109 aa12.61□□□□□ -0.39
VCAN-204ENST00000502527 SNAI2O43623 268 aa12.61□□□□□ -0.39
VCAN-204ENST00000502527 FCER1GP30273 86 aa12.61□□□□□ -0.39
VCAN-204ENST00000502527 BVES-AS1Q5T3Y7 98 aa12.61□□□□□ -0.39
VCAN-204ENST00000502527 GPHB5Q86YW7 130 aa12.61□□□□□ -0.39
VCAN-204ENST00000502527 KLK15Q9H2R5 256 aa12.61□□□□□ -0.39
VCAN-204ENST00000502527 TMEM8BA6NDV4 472 aa12.61□□□□□ -0.39
VCAN-204ENST00000502527 SOCS3O14543 225 aa12.61□□□□□ -0.39
VCAN-204ENST00000502527 EVI2AP22794 236 aa12.61□□□□□ -0.39
VCAN-204ENST00000502527 LEPP41159 167 aa12.61□□□□□ -0.39
VCAN-204ENST00000502527 SPANXN1Q5VSR9 72 aa12.61□□□□□ -0.39
VCAN-204ENST00000502527 Q8N8P6 123 aa12.6□□□□□ -0.39
VCAN-204ENST00000502527 OR2K2Q8NGT1 345 aa12.6□□□□□ -0.39
VCAN-204ENST00000502527 IGLV1-40P01703 118 aa12.6□□□□□ -0.39
VCAN-204ENST00000502527 DSCR9P59020 149 aa12.6□□□□□ -0.39
VCAN-204ENST00000502527 PRR9Q5T870 116 aa12.6□□□□□ -0.39
VCAN-204ENST00000502527 SPTAN1Q13813 2472 aaKnown RBP12.6□□□□□ -0.39
VCAN-204ENST00000502527 GATA1P15976 413 aaPredicted RBP12.59□□□□□ -0.39
VCAN-204ENST00000502527 RPL11P62913 178 aaKnown RBP12.59□□□□□ -0.39
VCAN-204ENST00000502527 ANKRD39Q53RE8 183 aa12.59□□□□□ -0.39
VCAN-204ENST00000502527 Q6ZQT7 251 aa12.59□□□□□ -0.39
VCAN-204ENST00000502527 UFC1Q9Y3C8 167 aa12.59□□□□□ -0.39
VCAN-204ENST00000502527 TRAV21A0A0B4J279 112 aa12.58□□□□□ -0.39
VCAN-204ENST00000502527 GATA3P23771 443 aa12.58□□□□□ -0.39
VCAN-204ENST00000502527 ZFAND2AQ8N6M9 145 aa12.58□□□□□ -0.39
VCAN-204ENST00000502527 PRSS47A8MTI9 375 aa12.58□□□□□ -0.4
VCAN-204ENST00000502527 H3BVH4 76 aa12.58□□□□□ -0.4
VCAN-204ENST00000502527 Q6ZS46 218 aa12.58□□□□□ -0.4
VCAN-204ENST00000502527 Q6ZVH6 145 aa12.58□□□□□ -0.4
VCAN-204ENST00000502527 DEFB125Q8N687 156 aa12.58□□□□□ -0.4
VCAN-204ENST00000502527 C2orf91Q6ZV80 131 aa12.57□□□□□ -0.4
VCAN-204ENST00000502527 WFDC3Q8IUB2 231 aa12.57□□□□□ -0.4
VCAN-204ENST00000502527 C18orf15Q96N68 181 aa12.57□□□□□ -0.4
VCAN-204ENST00000502527 RHPN1-AS1Q9BWJ2 59 aa12.57□□□□□ -0.4
VCAN-204ENST00000502527 IGLV2-18A0A075B6J9 118 aa12.57□□□□□ -0.4
VCAN-204ENST00000502527 AVPP01185 164 aa12.57□□□□□ -0.4
VCAN-204ENST00000502527 FGF6P10767 208 aa12.57□□□□□ -0.4
VCAN-204ENST00000502527 CFHR3Q02985 330 aa12.57□□□□□ -0.4
VCAN-204ENST00000502527 DAZ1Q9NQZ3 744 aaKnown RBP12.57□□□□□ -0.4
VCAN-204ENST00000502527 ZNF580Q9UK33 172 aa12.57□□□□□ -0.4
VCAN-204ENST00000502527 J3KRW8 73 aa12.56□□□□□ -0.4
VCAN-204ENST00000502527 PTTG1IPP53801 180 aa12.56□□□□□ -0.4
VCAN-204ENST00000502527 PSMG4Q5JS54 123 aa12.56□□□□□ -0.4
VCAN-204ENST00000502527 NRACQ8N912 160 aa12.56□□□□□ -0.4
VCAN-204ENST00000502527 MRAP2Q96G30 205 aa12.56□□□□□ -0.4
VCAN-204ENST00000502527 CFAP46Q8IYW2 2715 aa12.56□□□□□ -0.4
VCAN-204ENST00000502527 TRBV7-9A0A0J9YWB2 115 aa12.55□□□□□ -0.4
VCAN-204ENST00000502527 UBE2V1Q13404 147 aa12.55□□□□□ -0.4
VCAN-204ENST00000502527 TM4SF20Q53R12 229 aa12.55□□□□□ -0.4
VCAN-204ENST00000502527 LCNL1Q6ZST4 164 aa12.55□□□□□ -0.4
VCAN-204ENST00000502527 TMEM158Q8WZ71 300 aa12.55□□□□□ -0.4
VCAN-204ENST00000502527 BOD1L2Q8IYS8 172 aa12.55□□□□□ -0.4
VCAN-204ENST00000502527 FAM19A4Q96LR4 140 aa12.55□□□□□ -0.4
VCAN-204ENST00000502527 DKK2Q9UBU2 259 aa12.55□□□□□ -0.4
VCAN-204ENST00000502527 PEF1Q9UBV8 284 aaKnown RBP12.55□□□□□ -0.4
VCAN-204ENST00000502527 PIEZO1Q92508 2521 aa12.54□□□□□ -0.4
VCAN-204ENST00000502527 TRAV26-2A0A0B4J265 109 aa12.54□□□□□ -0.4
VCAN-204ENST00000502527 K7EMT4 169 aa12.54□□□□□ -0.4
VCAN-204ENST00000502527 TAX1BP3O14907 124 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms