RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 MITD1Q8WV92 249 aa9.83□□□□□ -0.84
TRAF4-212ENST00000498540 C11orf1Q9H5F2 150 aa9.83□□□□□ -0.84
TRAF4-212ENST00000498540 AAMDCQ9H7C9 122 aa9.83□□□□□ -0.84
TRAF4-212ENST00000498540 KRTAP29-1A8MX34 341 aaPredicted RBP9.82□□□□□ -0.84
TRAF4-212ENST00000498540 S100A5P33763 92 aa9.82□□□□□ -0.84
TRAF4-212ENST00000498540 BAK1Q16611 211 aa9.82□□□□□ -0.84
TRAF4-212ENST00000498540 GCSAMLQ5JQS6 135 aa9.82□□□□□ -0.84
TRAF4-212ENST00000498540 TXNDC17Q9BRA2 123 aa9.82□□□□□ -0.84
TRAF4-212ENST00000498540 SLC25A2Q9BXI2 301 aa9.82□□□□□ -0.84
TRAF4-212ENST00000498540 IGHV3-38A0A0C4DH36 116 aa9.81□□□□□ -0.84
TRAF4-212ENST00000498540 C9JCJ5 164 aa9.81□□□□□ -0.84
TRAF4-212ENST00000498540 ZNF138P52744 262 aa9.81□□□□□ -0.84
TRAF4-212ENST00000498540 RASL10AQ92737 203 aa9.81□□□□□ -0.84
TRAF4-212ENST00000498540 C20orf85Q9H1P6 137 aa9.81□□□□□ -0.84
TRAF4-212ENST00000498540 Q9HAA7 133 aa9.81□□□□□ -0.84
TRAF4-212ENST00000498540 DNAH8Q96JB1 4490 aa9.8□□□□□ -0.84
TRAF4-212ENST00000498540 PLA2G1BP04054 148 aaKnown RBP9.8□□□□□ -0.84
TRAF4-212ENST00000498540 FGF7P21781 194 aa9.8□□□□□ -0.84
TRAF4-212ENST00000498540 INPP1P49441 399 aa9.8□□□□□ -0.84
TRAF4-212ENST00000498540 TMEM183BQ1AE95 376 aa9.8□□□□□ -0.84
TRAF4-212ENST00000498540 TRIQKQ629K1 86 aa9.8□□□□□ -0.84
TRAF4-212ENST00000498540 TMEM183AQ8IXX5 376 aa9.8□□□□□ -0.84
TRAF4-212ENST00000498540 LINC00528Q8N1L1 170 aa9.8□□□□□ -0.84
TRAF4-212ENST00000498540 CHAC2Q8WUX2 184 aa9.8□□□□□ -0.84
TRAF4-212ENST00000498540 FAM167A-AS1Q96KT0 104 aa9.8□□□□□ -0.84
TRAF4-212ENST00000498540 IGSF23A1L1A6 192 aa9.79□□□□□ -0.84
TRAF4-212ENST00000498540 FAM25EA8MYX2 175 aa9.79□□□□□ -0.84
TRAF4-212ENST00000498540 IBA57-AS1B1ANH7 110 aa9.79□□□□□ -0.84
TRAF4-212ENST00000498540 SULT1A1P50225 295 aa9.79□□□□□ -0.84
TRAF4-212ENST00000498540 ZNF266Q14584 549 aa9.79□□□□□ -0.84
TRAF4-212ENST00000498540 ZNF846Q147U1 533 aa9.79□□□□□ -0.84
TRAF4-212ENST00000498540 LINC01556Q5JQF7 62 aa9.79□□□□□ -0.84
TRAF4-212ENST00000498540 SLC25A31Q9H0C2 315 aa9.79□□□□□ -0.84
TRAF4-212ENST00000498540 GPN1Q9HCN4 374 aaPredicted RBP9.79□□□□□ -0.84
TRAF4-212ENST00000498540 TRAV4A0A0B4J268 109 aa9.78□□□□□ -0.84
TRAF4-212ENST00000498540 TRBV7-9A0A0J9YWB2 115 aa9.78□□□□□ -0.84
TRAF4-212ENST00000498540 C1QBP02746 253 aa9.78□□□□□ -0.84
TRAF4-212ENST00000498540 NBEAP1P0C6P0 100 aa9.78□□□□□ -0.84
TRAF4-212ENST00000498540 S100A11P31949 105 aa9.78□□□□□ -0.84
TRAF4-212ENST00000498540 PPT1P50897 306 aa9.78□□□□□ -0.84
TRAF4-212ENST00000498540 SPANXN2Q5MJ10 180 aa9.78□□□□□ -0.84
TRAF4-212ENST00000498540 Q6ZSA8 131 aa9.78□□□□□ -0.84
TRAF4-212ENST00000498540 MIR17HGQ75NE6 70 aa9.78□□□□□ -0.84
TRAF4-212ENST00000498540 NHLRC2Q8NBF2 726 aa9.78□□□□□ -0.84
TRAF4-212ENST00000498540 PHYHIPLQ96FC7 376 aa9.78□□□□□ -0.84
TRAF4-212ENST00000498540 SPXQ9BT56 116 aa9.78□□□□□ -0.84
TRAF4-212ENST00000498540 LYRM2Q9NU23 88 aaPredicted RBP9.78□□□□□ -0.84
TRAF4-212ENST00000498540 OR10J4P0C629 311 aa9.77□□□□□ -0.85
TRAF4-212ENST00000498540 TIRAPP58753 221 aa9.77□□□□□ -0.85
TRAF4-212ENST00000498540 WFDC2Q14508 124 aa9.77□□□□□ -0.85
TRAF4-212ENST00000498540 Q6AWC8 147 aa9.77□□□□□ -0.85
TRAF4-212ENST00000498540 TMEM252Q8N6L7 170 aa9.77□□□□□ -0.85
TRAF4-212ENST00000498540 OR4C5Q8NGB2 326 aa9.77□□□□□ -0.85
TRAF4-212ENST00000498540 DEFB104AQ8WTQ1 72 aa9.77□□□□□ -0.85
TRAF4-212ENST00000498540 FXYD5Q96DB9 178 aa9.77□□□□□ -0.85
TRAF4-212ENST00000498540 SDHCQ99643 169 aaPredicted RBP9.77□□□□□ -0.85
TRAF4-212ENST00000498540 NPCDR1Q9BY65 106 aa9.77□□□□□ -0.85
TRAF4-212ENST00000498540 TRGV11A0A075B6L2 103 aa9.76□□□□□ -0.85
TRAF4-212ENST00000498540 IGHV3-16A0A0C4DH30 117 aa9.76□□□□□ -0.85
TRAF4-212ENST00000498540 C5orf51A6NDU8 294 aa9.76□□□□□ -0.85
TRAF4-212ENST00000498540 IGHV3-30P01768 117 aa9.76□□□□□ -0.85
TRAF4-212ENST00000498540 IGHV3-33P01772 117 aa9.76□□□□□ -0.85
TRAF4-212ENST00000498540 IGHV3-30-3P0DP02 117 aa9.76□□□□□ -0.85
TRAF4-212ENST00000498540 IGHV3-30-5P0DP03 117 aa9.76□□□□□ -0.85
TRAF4-212ENST00000498540 S100A10P60903 97 aa9.76□□□□□ -0.85
TRAF4-212ENST00000498540 HBG1P69891 147 aa9.76□□□□□ -0.85
TRAF4-212ENST00000498540 HBG2P69892 147 aa9.76□□□□□ -0.85
TRAF4-212ENST00000498540 FAM159AQ6UWV7 190 aa9.76□□□□□ -0.85
TRAF4-212ENST00000498540 SH2D6Q7Z4S9 175 aa9.76□□□□□ -0.85
TRAF4-212ENST00000498540 STX12Q86Y82 276 aa9.76□□□□□ -0.85
TRAF4-212ENST00000498540 OR51M1Q9H341 326 aa9.76□□□□□ -0.85
TRAF4-212ENST00000498540 GATA1P15976 413 aaPredicted RBP9.75□□□□□ -0.85
TRAF4-212ENST00000498540 PVALBP20472 110 aaPredicted RBP9.75□□□□□ -0.85
TRAF4-212ENST00000498540 THAP6Q8TBB0 222 aa9.75□□□□□ -0.85
TRAF4-212ENST00000498540 PAXXQ9BUH6 204 aa9.75□□□□□ -0.85
TRAF4-212ENST00000498540 NAGKQ9UJ70 344 aa9.75□□□□□ -0.85
TRAF4-212ENST00000498540 LRP1Q07954 4544 aaKnown RBP9.74□□□□□ -0.85
TRAF4-212ENST00000498540 TRAV8-6A0A0B4J262 113 aa9.74□□□□□ -0.85
TRAF4-212ENST00000498540 RBAKDNA6NC62 111 aa9.74□□□□□ -0.85
TRAF4-212ENST00000498540 CENPXA8MT69 81 aa9.74□□□□□ -0.85
TRAF4-212ENST00000498540 M0R2P5 195 aa9.74□□□□□ -0.85
TRAF4-212ENST00000498540 GNRH2O43555 120 aa9.74□□□□□ -0.85
TRAF4-212ENST00000498540 RAB32Q13637 225 aa9.74□□□□□ -0.85
TRAF4-212ENST00000498540 OR10J3Q5JRS4 329 aa9.74□□□□□ -0.85
TRAF4-212ENST00000498540 SERTAD4-AS1Q5TG53 156 aa9.74□□□□□ -0.85
TRAF4-212ENST00000498540 C2orf50Q96LR7 162 aa9.74□□□□□ -0.85
TRAF4-212ENST00000498540 SEC22CQ9BRL7 303 aa9.74□□□□□ -0.85
TRAF4-212ENST00000498540 HMCN2Q8NDA2 5059 aa9.74□□□□□ -0.85
TRAF4-212ENST00000498540 CCDC160A6NGH7 325 aa9.73□□□□□ -0.85
TRAF4-212ENST00000498540 CSN1S1P47710 185 aa9.73□□□□□ -0.85
TRAF4-212ENST00000498540 RANP62826 216 aaKnown RBP9.73□□□□□ -0.85
TRAF4-212ENST00000498540 ATP6V1FQ16864 119 aa9.73□□□□□ -0.85
TRAF4-212ENST00000498540 TDRG1Q3Y452 100 aa9.73□□□□□ -0.85
TRAF4-212ENST00000498540 LECT2O14960 151 aa9.72□□□□□ -0.85
TRAF4-212ENST00000498540 IL15RAQ13261 267 aa9.72□□□□□ -0.85
TRAF4-212ENST00000498540 Q8N3U1 123 aa9.72□□□□□ -0.85
TRAF4-212ENST00000498540 SLC25A29Q8N8R3 303 aa9.72□□□□□ -0.85
TRAF4-212ENST00000498540 SYT8Q8NBV8 401 aa9.72□□□□□ -0.85
TRAF4-212ENST00000498540 LENEPQ9Y5L5 61 aa9.72□□□□□ -0.85
TRAF4-212ENST00000498540 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms