RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 PYGO2Q9BRQ0 406 aa10.94□□□□□ -0.66
MUC1-220ENST00000498431 MDFICQ9P1T7 246 aa10.94□□□□□ -0.66
MUC1-220ENST00000498431 A0A087WTM6 91 aa10.93□□□□□ -0.66
MUC1-220ENST00000498431 TRGV1A0A0A0MS02 117 aa10.93□□□□□ -0.66
MUC1-220ENST00000498431 KANTRA0A1W2PQU2 76 aa10.93□□□□□ -0.66
MUC1-220ENST00000498431 LEPP41159 167 aa10.93□□□□□ -0.66
MUC1-220ENST00000498431 LGALSLQ3ZCW2 172 aaPredicted RBP10.93□□□□□ -0.66
MUC1-220ENST00000498431 RPL7L1Q6DKI1 246 aaKnown RBP10.93□□□□□ -0.66
MUC1-220ENST00000498431 Q6ZRG5 221 aa10.93□□□□□ -0.66
MUC1-220ENST00000498431 TMUB2Q71RG4 321 aa10.93□□□□□ -0.66
MUC1-220ENST00000498431 C18orf15Q96N68 181 aa10.93□□□□□ -0.66
MUC1-220ENST00000498431 ODF3Q96PU9 254 aa10.93□□□□□ -0.66
MUC1-220ENST00000498431 SLC39A9Q9NUM3 307 aa10.93□□□□□ -0.66
MUC1-220ENST00000498431 FUT9Q9Y231 359 aa10.93□□□□□ -0.66
MUC1-220ENST00000498431 PXMP4Q9Y6I8 212 aa10.93□□□□□ -0.66
MUC1-220ENST00000498431 BCL2L11O43521 198 aa10.92□□□□□ -0.66
MUC1-220ENST00000498431 HAMPP81172 84 aa10.92□□□□□ -0.66
MUC1-220ENST00000498431 CYTL1Q9NRR1 136 aa10.92□□□□□ -0.66
MUC1-220ENST00000498431 RNF24Q9Y225 148 aa10.92□□□□□ -0.66
MUC1-220ENST00000498431 KLF12Q9Y4X4 402 aa10.92□□□□□ -0.66
MUC1-220ENST00000498431 TIMM9Q9Y5J7 89 aa10.92□□□□□ -0.66
MUC1-220ENST00000498431 TRAV5A0A0B4J249 113 aa10.91□□□□□ -0.66
MUC1-220ENST00000498431 COX7A2P2O60397 106 aa10.91□□□□□ -0.66
MUC1-220ENST00000498431 ZNF324O75467 553 aaPredicted RBP10.91□□□□□ -0.66
MUC1-220ENST00000498431 IGHV3-53P01767 116 aa10.91□□□□□ -0.66
MUC1-220ENST00000498431 ERCC8Q13216 396 aa10.91□□□□□ -0.66
MUC1-220ENST00000498431 HSD17B11Q8NBQ5 300 aa10.91□□□□□ -0.66
MUC1-220ENST00000498431 OR1L4Q8NGR5 311 aa10.91□□□□□ -0.66
MUC1-220ENST00000498431 ICOSQ9Y6W8 199 aa10.91□□□□□ -0.66
MUC1-220ENST00000498431 C7orf71A4D174 169 aa10.9□□□□□ -0.66
MUC1-220ENST00000498431 PAX4O43316 350 aa10.9□□□□□ -0.66
MUC1-220ENST00000498431 ATP6V0CP27449 155 aa10.9□□□□□ -0.66
MUC1-220ENST00000498431 EIF5AP63241 154 aaKnown RBP10.9□□□□□ -0.66
MUC1-220ENST00000498431 BTN1A1Q13410 526 aa10.9□□□□□ -0.66
MUC1-220ENST00000498431 ICAM4Q14773 271 aa10.9□□□□□ -0.66
MUC1-220ENST00000498431 C10orf113Q5VZT2 155 aa10.9□□□□□ -0.66
MUC1-220ENST00000498431 C9orf62Q8N4C0 152 aa10.9□□□□□ -0.66
MUC1-220ENST00000498431 ZNF680Q8NEM1 530 aa10.9□□□□□ -0.66
MUC1-220ENST00000498431 PFDN5Q99471 154 aa10.9□□□□□ -0.66
MUC1-220ENST00000498431 PSMG3Q9BT73 122 aaPredicted RBP10.9□□□□□ -0.66
MUC1-220ENST00000498431 ZNF471Q9BX82 626 aaPredicted RBP10.9□□□□□ -0.66
MUC1-220ENST00000498431 DNAJC4Q9NNZ3 241 aa10.9□□□□□ -0.66
MUC1-220ENST00000498431 DNAH8Q96JB1 4490 aa10.9□□□□□ -0.67
MUC1-220ENST00000498431 M0R3E3 92 aa10.89□□□□□ -0.67
MUC1-220ENST00000498431 SPINK4O60575 86 aa10.89□□□□□ -0.67
MUC1-220ENST00000498431 SLC25A5P05141 298 aaKnown RBP10.89□□□□□ -0.67
MUC1-220ENST00000498431 FFAR4Q5NUL3 377 aa10.89□□□□□ -0.67
MUC1-220ENST00000498431 LYPD5Q6UWN5 251 aa10.89□□□□□ -0.67
MUC1-220ENST00000498431 KLLNB2CW77 178 aa10.88□□□□□ -0.67
MUC1-220ENST00000498431 NKX2-5P52952 324 aaPredicted RBP10.88□□□□□ -0.67
MUC1-220ENST00000498431 TCL1AP56279 114 aa10.88□□□□□ -0.67
MUC1-220ENST00000498431 SERF2P84101 59 aa10.88□□□□□ -0.67
MUC1-220ENST00000498431 ANXA2RQ3ZCQ2 193 aa10.88□□□□□ -0.67
MUC1-220ENST00000498431 Q6ZQT7 251 aa10.88□□□□□ -0.67
MUC1-220ENST00000498431 NFE4Q86UQ8 179 aa10.88□□□□□ -0.67
MUC1-220ENST00000498431 EIF4E3Q8N5X7 224 aaKnown RBP10.88□□□□□ -0.67
MUC1-220ENST00000498431 FAM19A4Q96LR4 140 aa10.88□□□□□ -0.67
MUC1-220ENST00000498431 LINC00467Q9BRT7 94 aa10.88□□□□□ -0.67
MUC1-220ENST00000498431 MRPL16Q9NX20 251 aaKnown RBP10.88□□□□□ -0.67
MUC1-220ENST00000498431 TP53TG3Q9ULZ0 132 aa10.88□□□□□ -0.67
MUC1-220ENST00000498431 RNASE4P34096 147 aaKnown RBP10.87□□□□□ -0.67
MUC1-220ENST00000498431 CRYBA4P53673 196 aa10.87□□□□□ -0.67
MUC1-220ENST00000498431 ACOT6Q3I5F7 207 aaPredicted RBP10.87□□□□□ -0.67
MUC1-220ENST00000498431 OR2G3Q8NGZ4 309 aa10.87□□□□□ -0.67
MUC1-220ENST00000498431 C8orf49Q96NF6 230 aa10.87□□□□□ -0.67
MUC1-220ENST00000498431 SH3BGRL3Q9H299 93 aa10.87□□□□□ -0.67
MUC1-220ENST00000498431 MBP02144 154 aa10.86□□□□□ -0.67
MUC1-220ENST00000498431 TPT1P13693 172 aaKnown RBP10.86□□□□□ -0.67
MUC1-220ENST00000498431 GCSHP23434 173 aa10.86□□□□□ -0.67
MUC1-220ENST00000498431 FHL2Q14192 279 aa10.86□□□□□ -0.67
MUC1-220ENST00000498431 GUK1Q16774 197 aa10.86□□□□□ -0.67
MUC1-220ENST00000498431 GCSAMLQ5JQS6 135 aa10.86□□□□□ -0.67
MUC1-220ENST00000498431 PRR9Q5T870 116 aa10.86□□□□□ -0.67
MUC1-220ENST00000498431 SLC51BQ86UW2 128 aa10.86□□□□□ -0.67
MUC1-220ENST00000498431 WFDC10BQ8IUB3 73 aa10.86□□□□□ -0.67
MUC1-220ENST00000498431 STOML3Q8TAV4 291 aa10.86□□□□□ -0.67
MUC1-220ENST00000498431 AGPAT4-IT1Q9H0P7 198 aa10.86□□□□□ -0.67
MUC1-220ENST00000498431 PRO0255Q9UI72 69 aa10.86□□□□□ -0.67
MUC1-220ENST00000498431 NDUFB4O95168 129 aa10.85□□□□□ -0.67
MUC1-220ENST00000498431 VGLL1Q99990 258 aa10.85□□□□□ -0.67
MUC1-220ENST00000498431 MSRB1Q9NZV6 116 aa10.85□□□□□ -0.67
MUC1-220ENST00000498431 HHLA3Q9XRX5 114 aa10.85□□□□□ -0.67
MUC1-220ENST00000498431 LY96Q9Y6Y9 160 aa10.85□□□□□ -0.67
MUC1-220ENST00000498431 TRBV19A0A075B6N1 114 aa10.84□□□□□ -0.67
MUC1-220ENST00000498431 ZNF253O75346 499 aa10.84□□□□□ -0.67
MUC1-220ENST00000498431 SEC11BP0C7V7 166 aa10.84□□□□□ -0.67
MUC1-220ENST00000498431 MRPL23Q16540 153 aaKnown RBP10.84□□□□□ -0.67
MUC1-220ENST00000498431 NEGR1Q7Z3B1 354 aa10.84□□□□□ -0.67
MUC1-220ENST00000498431 OR10G4Q8NGN3 311 aa10.84□□□□□ -0.67
MUC1-220ENST00000498431 OR10G9Q8NGN4 311 aa10.84□□□□□ -0.67
MUC1-220ENST00000498431 OR10G7Q8NGN6 311 aa10.84□□□□□ -0.67
MUC1-220ENST00000498431 MRPL53Q96EL3 112 aaKnown RBP10.84□□□□□ -0.67
MUC1-220ENST00000498431 MRPL32Q9BYC8 188 aaKnown RBP10.84□□□□□ -0.67
MUC1-220ENST00000498431 FAM229AH3BQW9 127 aa10.83□□□□□ -0.68
MUC1-220ENST00000498431 RAB2AP61019 212 aa10.83□□□□□ -0.68
MUC1-220ENST00000498431 AKR1C8PQ5T2L2 129 aa10.83□□□□□ -0.68
MUC1-220ENST00000498431 IBA57Q5T440 356 aaKnown RBP10.83□□□□□ -0.68
MUC1-220ENST00000498431 EIF5AL1Q6IS14 154 aaKnown RBP10.83□□□□□ -0.68
MUC1-220ENST00000498431 Q6ZSN1 163 aa10.83□□□□□ -0.68
MUC1-220ENST00000498431 ZFAND2AQ8N6M9 145 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 213.5 ms