RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 RPRMQ9NS64 109 aa1□□□□□ -2.25
XRN1-214ENST00000498077 DNAJB9Q9UBS3 223 aa1□□□□□ -2.25
XRN1-214ENST00000498077 UQCR10Q9UDW1 63 aa1□□□□□ -2.25
XRN1-214ENST00000498077 PILRAQ9UKJ1 303 aa1□□□□□ -2.25
XRN1-214ENST00000498077 ZANQ9Y493 2812 aa1□□□□□ -2.25
XRN1-214ENST00000498077 SF3B1O75533 1304 aaKnown RBP eCLIP1□□□□□ -2.252e-6■■■■■ 83.7
XRN1-214ENST00000498077 PTPRFP10586 1907 aa1□□□□□ -2.25
XRN1-214ENST00000498077 NUP98P52948 1817 aa1□□□□□ -2.25
XRN1-214ENST00000498077 PRKYO43930 277 aa1□□□□□ -2.25
XRN1-214ENST00000498077 OR7C1O76099 320 aaPredicted RBP1□□□□□ -2.25
XRN1-214ENST00000498077 MT-ND4LP03901 98 aa1□□□□□ -2.25
XRN1-214ENST00000498077 MARCKSL1P49006 195 aa1□□□□□ -2.25
XRN1-214ENST00000498077 SPINK7P58062 85 aa1□□□□□ -2.25
XRN1-214ENST00000498077 SPCS3P61009 180 aa1□□□□□ -2.25
XRN1-214ENST00000498077 KRTAP1-1Q07627 177 aa1□□□□□ -2.25
XRN1-214ENST00000498077 GGTA1PQ4G0N0 100 aa1□□□□□ -2.25
XRN1-214ENST00000498077 FAM104BQ5XKR9 115 aa1□□□□□ -2.25
XRN1-214ENST00000498077 Q8NFD4 153 aa1□□□□□ -2.25
XRN1-214ENST00000498077 MRPL37Q9BZE1 423 aaKnown RBP1□□□□□ -2.25
XRN1-214ENST00000498077 BATF3Q9NR55 127 aa1□□□□□ -2.25
XRN1-214ENST00000498077 TMEM235A6NFC5 223 aa1□□□□□ -2.25
XRN1-214ENST00000498077 DHHO43323 396 aa1□□□□□ -2.25
XRN1-214ENST00000498077 SHBGP04278 402 aa1□□□□□ -2.25
XRN1-214ENST00000498077 CSN2P05814 226 aa1□□□□□ -2.25
XRN1-214ENST00000498077 XCL1P47992 114 aa1□□□□□ -2.25
XRN1-214ENST00000498077 ZNF80P51504 273 aaPredicted RBP1□□□□□ -2.25
XRN1-214ENST00000498077 HSD52Q0P140 79 aa1□□□□□ -2.25
XRN1-214ENST00000498077 KRTAP15-1Q3LI76 137 aa1□□□□□ -2.25
XRN1-214ENST00000498077 GDF5OSQ5U4N7 250 aa1□□□□□ -2.25
XRN1-214ENST00000498077 ARL6IP4Q66PJ3 421 aaKnown RBP1□□□□□ -2.25
XRN1-214ENST00000498077 TMEM182Q6ZP80 229 aaPredicted RBP1□□□□□ -2.25
XRN1-214ENST00000498077 OR52E2Q8NGJ4 325 aa1□□□□□ -2.25
XRN1-214ENST00000498077 REEP6Q96HR9 211 aa1□□□□□ -2.25
XRN1-214ENST00000498077 SMIM14Q96QK8 99 aa1□□□□□ -2.25
XRN1-214ENST00000498077 MAP6D1Q9H9H5 199 aa1□□□□□ -2.25
XRN1-214ENST00000498077 NMRAL1Q9HBL8 299 aa1□□□□□ -2.25
XRN1-214ENST00000498077 XCL2Q9UBD3 114 aa1□□□□□ -2.25
XRN1-214ENST00000498077 OR5V1Q9UGF6 321 aa1□□□□□ -2.25
XRN1-214ENST00000498077 KMT2CQ8NEZ4 4911 aaKnown RBP1□□□□□ -2.25
XRN1-214ENST00000498077 RNF103-CHMP3A0A140T963 221 aa1□□□□□ -2.25
XRN1-214ENST00000498077 PINLYPA6NC86 204 aa1□□□□□ -2.25
XRN1-214ENST00000498077 C9JQL5 133 aa1□□□□□ -2.25
XRN1-214ENST00000498077 D6R8Y8 96 aa1□□□□□ -2.25
XRN1-214ENST00000498077 K7EQD1 137 aa1□□□□□ -2.25
XRN1-214ENST00000498077 YPEL1O60688 119 aa1□□□□□ -2.25
XRN1-214ENST00000498077 DEXIO95424 95 aa1□□□□□ -2.25
XRN1-214ENST00000498077 EFEMP2O95967 443 aa1□□□□□ -2.25
XRN1-214ENST00000498077 RPS27P42677 84 aaKnown RBP1□□□□□ -2.25
XRN1-214ENST00000498077 KRTAP10-6P60371 365 aaPredicted RBP1□□□□□ -2.25
XRN1-214ENST00000498077 RND3P61587 244 aa1□□□□□ -2.25
XRN1-214ENST00000498077 UBE2BP63146 152 aa1□□□□□ -2.25
XRN1-214ENST00000498077 COTL1Q14019 142 aa1□□□□□ -2.25
XRN1-214ENST00000498077 Q8IZM0 81 aa1□□□□□ -2.25
XRN1-214ENST00000498077 LY6G5BQ8NDX9 201 aa1□□□□□ -2.25
XRN1-214ENST00000498077 OR52E5Q8NH55 327 aa1□□□□□ -2.25
XRN1-214ENST00000498077 DOK4Q8TEW6 326 aa1□□□□□ -2.25
XRN1-214ENST00000498077 DEFB104AQ8WTQ1 72 aa1□□□□□ -2.25
XRN1-214ENST00000498077 EVPLQ92817 2033 aa1□□□□□ -2.25
XRN1-214ENST00000498077 KIF20BQ96Q89 1820 aa1□□□□□ -2.25
XRN1-214ENST00000498077 MEGF8Q7Z7M0 2845 aa1□□□□□ -2.25
XRN1-214ENST00000498077 IGLV5-48A0A075B6I7 105 aa1□□□□□ -2.25
XRN1-214ENST00000498077 A0A087WWL8 130 aa1□□□□□ -2.25
XRN1-214ENST00000498077 C19orf71A6NCJ1 209 aa1□□□□□ -2.25
XRN1-214ENST00000498077 E7EQ34 232 aa1□□□□□ -2.25
XRN1-214ENST00000498077 LYRM1O43325 122 aa1□□□□□ -2.25
XRN1-214ENST00000498077 TSPAN12O95859 305 aa1□□□□□ -2.25
XRN1-214ENST00000498077 OXTP01178 125 aa1□□□□□ -2.25
XRN1-214ENST00000498077 SERPINE2P07093 398 aa1□□□□□ -2.25
XRN1-214ENST00000498077 RPL35P42766 123 aaKnown RBP1□□□□□ -2.25
XRN1-214ENST00000498077 NPC2P61916 151 aa1□□□□□ -2.25
XRN1-214ENST00000498077 CASC10Q5T4H9 136 aa1□□□□□ -2.25
XRN1-214ENST00000498077 LAMTOR1Q6IAA8 161 aa1□□□□□ -2.25
XRN1-214ENST00000498077 LINC00337Q8N6G1 96 aa1□□□□□ -2.25
XRN1-214ENST00000498077 C16orf95Q9H693 158 aa1□□□□□ -2.25
XRN1-214ENST00000498077 KAAG1Q9UBP8 84 aa1□□□□□ -2.25
XRN1-214ENST00000498077 UBL3O95164 117 aa0.99□□□□□ -2.25
XRN1-214ENST00000498077 HOXB9P17482 250 aaPredicted RBP0.99□□□□□ -2.25
XRN1-214ENST00000498077 RCC1P18754 421 aaPredicted RBP0.99□□□□□ -2.25
XRN1-214ENST00000498077 OR1D2P34982 312 aa0.99□□□□□ -2.25
XRN1-214ENST00000498077 FXYD7P58549 80 aa0.99□□□□□ -2.25
XRN1-214ENST00000498077 MEIG1Q5JSS6 88 aa0.99□□□□□ -2.25
XRN1-214ENST00000498077 TMEM78Q5T7P6 136 aa0.99□□□□□ -2.25
XRN1-214ENST00000498077 KRTAP5-1Q6L8H4 278 aa0.99□□□□□ -2.25
XRN1-214ENST00000498077 PQLC2Q6ZP29 291 aa0.99□□□□□ -2.25
XRN1-214ENST00000498077 TMCO2Q7Z6W1 182 aaPredicted RBP0.99□□□□□ -2.25
XRN1-214ENST00000498077 JAGN1Q8N5M9 183 aa0.99□□□□□ -2.25
XRN1-214ENST00000498077 HOXD1Q9GZZ0 328 aa0.99□□□□□ -2.25
XRN1-214ENST00000498077 CNIH4Q9P003 139 aa0.99□□□□□ -2.25
XRN1-214ENST00000498077 CELSR3Q9NYQ7 3312 aa0.99□□□□□ -2.25
XRN1-214ENST00000498077 UBR4Q5T4S7 5183 aa0.99□□□□□ -2.25
XRN1-214ENST00000498077 COL6A3P12111 3177 aa0.99□□□□□ -2.25
XRN1-214ENST00000498077 DSPP15924 2871 aaKnown RBP0.99□□□□□ -2.25
XRN1-214ENST00000498077 KNCNA6PVL3 124 aa0.99□□□□□ -2.25
XRN1-214ENST00000498077 KLLNB2CW77 178 aa0.99□□□□□ -2.25
XRN1-214ENST00000498077 NPIPB9F8W1W9 429 aa0.99□□□□□ -2.25
XRN1-214ENST00000498077 ZFAND5O76080 213 aa0.99□□□□□ -2.25
XRN1-214ENST00000498077 SFT2D2O95562 160 aa0.99□□□□□ -2.25
XRN1-214ENST00000498077 CRHP06850 196 aa0.99□□□□□ -2.25
XRN1-214ENST00000498077 SLC35G6P0C7Q6 338 aa0.99□□□□□ -2.25
XRN1-214ENST00000498077 RPA3P35244 121 aaPredicted RBP0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms