RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 RANP62826 216 aaKnown RBP13.02□□□□□ -0.33
PRKCB-209ENST00000498058 MRPL53Q96EL3 112 aaKnown RBP13.02□□□□□ -0.33
PRKCB-209ENST00000498058 TMPRSS5Q9H3S3 457 aa13.02□□□□□ -0.33
PRKCB-209ENST00000498058 HSPG2P98160 4391 aa13.02□□□□□ -0.33
PRKCB-209ENST00000498058 NDUFB4O95168 129 aa13.01□□□□□ -0.33
PRKCB-209ENST00000498058 TAGLN2P37802 199 aaKnown RBP13.01□□□□□ -0.33
PRKCB-209ENST00000498058 CSN1S1P47710 185 aa13.01□□□□□ -0.33
PRKCB-209ENST00000498058 PSG3Q16557 428 aa13.01□□□□□ -0.33
PRKCB-209ENST00000498058 ZNF738Q8NE65 137 aa13.01□□□□□ -0.33
PRKCB-209ENST00000498058 CMTM2Q8TAZ6 248 aa13.01□□□□□ -0.33
PRKCB-209ENST00000498058 Q9H3A6 140 aa13.01□□□□□ -0.33
PRKCB-209ENST00000498058 LYRM9A8MSI8 78 aa13□□□□□ -0.33
PRKCB-209ENST00000498058 DEFB130BP0DP73 79 aa13□□□□□ -0.33
PRKCB-209ENST00000498058 DEFB130AP0DP74 79 aa13□□□□□ -0.33
PRKCB-209ENST00000498058 TSPOP30536 169 aa13□□□□□ -0.33
PRKCB-209ENST00000498058 IFITM2Q01629 132 aa13□□□□□ -0.33
PRKCB-209ENST00000498058 C1orf134Q5TEV5 83 aa13□□□□□ -0.33
PRKCB-209ENST00000498058 LYPD6BQ8NI32 183 aa13□□□□□ -0.33
PRKCB-209ENST00000498058 RXFP4Q8TDU9 374 aa13□□□□□ -0.33
PRKCB-209ENST00000498058 GNG13Q9P2W3 67 aa13□□□□□ -0.33
PRKCB-209ENST00000498058 UBE2G2P60604 165 aa12.99□□□□□ -0.33
PRKCB-209ENST00000498058 HIST1H1AQ02539 215 aaPredicted RBP12.99□□□□□ -0.33
PRKCB-209ENST00000498058 ICAM4Q14773 271 aa12.99□□□□□ -0.33
PRKCB-209ENST00000498058 ARL6IP6Q8N6S5 226 aa12.99□□□□□ -0.33
PRKCB-209ENST00000498058 C15orf53Q8NAA6 179 aa12.99□□□□□ -0.33
PRKCB-209ENST00000498058 OR8A1Q8NGG7 326 aa12.99□□□□□ -0.33
PRKCB-209ENST00000498058 TXNDC17Q9BRA2 123 aa12.99□□□□□ -0.33
PRKCB-209ENST00000498058 PGPA6NDG6 321 aa12.98□□□□□ -0.33
PRKCB-209ENST00000498058 FAM74A7A6NL05 159 aa12.98□□□□□ -0.33
PRKCB-209ENST00000498058 NMBP08949 121 aa12.98□□□□□ -0.33
PRKCB-209ENST00000498058 KIR3DS1Q14943 382 aa12.98□□□□□ -0.33
PRKCB-209ENST00000498058 CST9LP1Q5W188 147 aa12.98□□□□□ -0.33
PRKCB-209ENST00000498058 EXOC3-AS1Q8N2X6 119 aa12.98□□□□□ -0.33
PRKCB-209ENST00000498058 RPUSD4Q96CM3 377 aaKnown RBP12.98□□□□□ -0.33
PRKCB-209ENST00000498058 TCEAL7Q9BRU2 100 aa12.98□□□□□ -0.33
PRKCB-209ENST00000498058 LRP1BQ9NZR2 4599 aa12.97□□□□□ -0.33
PRKCB-209ENST00000498058 F5H768 121 aa12.97□□□□□ -0.33
PRKCB-209ENST00000498058 RGS13O14921 159 aa12.97□□□□□ -0.33
PRKCB-209ENST00000498058 PAGE4O60829 102 aa12.97□□□□□ -0.33
PRKCB-209ENST00000498058 SLC25A5P05141 298 aaKnown RBP12.97□□□□□ -0.33
PRKCB-209ENST00000498058 CCL20P78556 96 aa12.97□□□□□ -0.33
PRKCB-209ENST00000498058 TNP2Q05952 138 aa12.97□□□□□ -0.33
PRKCB-209ENST00000498058 CLLU1Q5K131 121 aa12.97□□□□□ -0.33
PRKCB-209ENST00000498058 C5orf17Q8NAS9 161 aa12.97□□□□□ -0.33
PRKCB-209ENST00000498058 ZNRF2Q8NHG8 242 aa12.97□□□□□ -0.33
PRKCB-209ENST00000498058 LINC01587Q99440 93 aa12.97□□□□□ -0.33
PRKCB-209ENST00000498058 F6UZH7 168 aa12.96□□□□□ -0.33
PRKCB-209ENST00000498058 K7EQM0 130 aa12.96□□□□□ -0.33
PRKCB-209ENST00000498058 SUMO1P63165 101 aaKnown RBP12.96□□□□□ -0.33
PRKCB-209ENST00000498058 OR10J6PQ8NGY7 276 aa12.96□□□□□ -0.33
PRKCB-209ENST00000498058 SERTM2A0A1B0GWG4 89 aa12.95□□□□□ -0.34
PRKCB-209ENST00000498058 GGTLC3B5MD39 225 aa12.95□□□□□ -0.34
PRKCB-209ENST00000498058 NUDT3O95989 172 aa12.95□□□□□ -0.34
PRKCB-209ENST00000498058 BCL2P10415 239 aa12.95□□□□□ -0.34
PRKCB-209ENST00000498058 SOHLH1Q5JUK2 328 aa12.95□□□□□ -0.34
PRKCB-209ENST00000498058 NBDYA0A0U1RRE5 68 aa12.94□□□□□ -0.34
PRKCB-209ENST00000498058 PRAC2D3DTV9 90 aa12.94□□□□□ -0.34
PRKCB-209ENST00000498058 HTN1P15515 57 aa12.94□□□□□ -0.34
PRKCB-209ENST00000498058 FAM3BP58499 235 aaPredicted RBP12.94□□□□□ -0.34
PRKCB-209ENST00000498058 TAS2R60P59551 318 aa12.94□□□□□ -0.34
PRKCB-209ENST00000498058 PCNPQ8WW12 178 aaKnown RBP12.94□□□□□ -0.34
PRKCB-209ENST00000498058 HIST1H2BAQ96A08 127 aa12.94□□□□□ -0.34
PRKCB-209ENST00000498058 ATG101Q9BSB4 218 aa12.94□□□□□ -0.34
PRKCB-209ENST00000498058 VAX2Q9UIW0 290 aa12.94□□□□□ -0.34
PRKCB-209ENST00000498058 LINC00588Q9Y4M8 146 aa12.94□□□□□ -0.34
PRKCB-209ENST00000498058 RBAKDNA6NC62 111 aa12.93□□□□□ -0.34
PRKCB-209ENST00000498058 RBFOX3A6NFN3 312 aa12.93□□□□□ -0.34
PRKCB-209ENST00000498058 CBY3A6NI87 242 aa12.93□□□□□ -0.34
PRKCB-209ENST00000498058 M0R3E3 92 aa12.93□□□□□ -0.34
PRKCB-209ENST00000498058 ATP5G1P05496 136 aa12.93□□□□□ -0.34
PRKCB-209ENST00000498058 ATP5G3P48201 142 aa12.93□□□□□ -0.34
PRKCB-209ENST00000498058 MEF2BQ02080 365 aaPredicted RBP12.93□□□□□ -0.34
PRKCB-209ENST00000498058 TMEM256Q8N2U0 113 aa12.93□□□□□ -0.34
PRKCB-209ENST00000498058 RNASE8Q8TDE3 154 aaKnown RBP12.93□□□□□ -0.34
PRKCB-209ENST00000498058 EPDR1Q9UM22 224 aa12.93□□□□□ -0.34
PRKCB-209ENST00000498058 RPH3ALQ9UNE2 315 aa12.93□□□□□ -0.34
PRKCB-209ENST00000498058 DIRC3C9JPN6 131 aa12.92□□□□□ -0.34
PRKCB-209ENST00000498058 PDE6DO43924 150 aa12.92□□□□□ -0.34
PRKCB-209ENST00000498058 CDKN1BP46527 198 aa12.92□□□□□ -0.34
PRKCB-209ENST00000498058 C16orf74Q96GX8 76 aa12.92□□□□□ -0.34
PRKCB-209ENST00000498058 FAM210AQ96ND0 272 aa12.92□□□□□ -0.34
PRKCB-209ENST00000498058 EIF5A2Q9GZV4 153 aaKnown RBP12.92□□□□□ -0.34
PRKCB-209ENST00000498058 NOP10Q9NPE3 64 aaKnown RBP12.92□□□□□ -0.34
PRKCB-209ENST00000498058 FBLL1A6NHQ2 334 aaKnown RBP12.91□□□□□ -0.34
PRKCB-209ENST00000498058 TCRAP04437 139 aa12.91□□□□□ -0.34
PRKCB-209ENST00000498058 ZNF506Q5JVG8 444 aa12.91□□□□□ -0.34
PRKCB-209ENST00000498058 CYB561D1Q8N8Q1 229 aa12.91□□□□□ -0.34
PRKCB-209ENST00000498058 PPP1R14DQ9NXH3 145 aa12.91□□□□□ -0.34
PRKCB-209ENST00000498058 TIMM8BQ9Y5J9 83 aaPredicted RBP12.91□□□□□ -0.34
PRKCB-209ENST00000498058 PEX7O00628 323 aa12.9□□□□□ -0.34
PRKCB-209ENST00000498058 TOR2AQ5JU69 321 aa12.9□□□□□ -0.34
PRKCB-209ENST00000498058 TMEM78Q5T7P6 136 aa12.9□□□□□ -0.34
PRKCB-209ENST00000498058 GOLT1AQ6ZVE7 132 aa12.9□□□□□ -0.34
PRKCB-209ENST00000498058 CCDC28AQ8IWP9 274 aa12.9□□□□□ -0.34
PRKCB-209ENST00000498058 C6orf223Q8N319 242 aa12.9□□□□□ -0.34
PRKCB-209ENST00000498058 LINC00612Q8N6U2 182 aa12.9□□□□□ -0.34
PRKCB-209ENST00000498058 NPIPB6E9PJ23 425 aa12.89□□□□□ -0.35
PRKCB-209ENST00000498058 NDUFS6O75380 124 aaKnown RBP12.89□□□□□ -0.35
PRKCB-209ENST00000498058 GNG5P63218 68 aa12.89□□□□□ -0.35
PRKCB-209ENST00000498058 GFI1BQ5VTD9 330 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms