RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 C11orf72Q8NBR9 251 aa4.21□□□□□ -1.74
TMEM39A-212ENST00000497993 OR4X1Q8NH49 305 aa4.21□□□□□ -1.74
TMEM39A-212ENST00000497993 GPR146Q96CH1 333 aa4.21□□□□□ -1.74
TMEM39A-212ENST00000497993 KRTAP17-1Q9BYP8 105 aa4.21□□□□□ -1.74
TMEM39A-212ENST00000497993 VSIRQ9H7M9 311 aa4.21□□□□□ -1.74
TMEM39A-212ENST00000497993 EDA2RQ9HAV5 297 aa4.21□□□□□ -1.74
TMEM39A-212ENST00000497993 LSM5Q9Y4Y9 91 aaKnown RBP4.21□□□□□ -1.74
TMEM39A-212ENST00000497993 ALG5Q9Y673 324 aa4.21□□□□□ -1.74
TMEM39A-212ENST00000497993 STARD9Q9P2P6 4700 aa4.21□□□□□ -1.74
TMEM39A-212ENST00000497993 IGKV2D-30A0A075B6S6 120 aa4.2□□□□□ -1.74
TMEM39A-212ENST00000497993 LOC105371267A0A1B0GV96 52 aa4.2□□□□□ -1.74
TMEM39A-212ENST00000497993 PLA2G10O15496 165 aa4.2□□□□□ -1.74
TMEM39A-212ENST00000497993 NDUFB6O95139 128 aa4.2□□□□□ -1.74
TMEM39A-212ENST00000497993 MT-CO2P00403 227 aa4.2□□□□□ -1.74
TMEM39A-212ENST00000497993 IGKV1-17P01599 117 aa4.2□□□□□ -1.74
TMEM39A-212ENST00000497993 SULT1A3P0DMM9 295 aa4.2□□□□□ -1.74
TMEM39A-212ENST00000497993 SULT1A4P0DMN0 295 aa4.2□□□□□ -1.74
TMEM39A-212ENST00000497993 SLC25A4P12235 298 aa4.2□□□□□ -1.74
TMEM39A-212ENST00000497993 CCR6P51684 374 aa4.2□□□□□ -1.74
TMEM39A-212ENST00000497993 HBG1P69891 147 aa4.2□□□□□ -1.74
TMEM39A-212ENST00000497993 HBG2P69892 147 aa4.2□□□□□ -1.74
TMEM39A-212ENST00000497993 S100A12P80511 92 aa4.2□□□□□ -1.74
TMEM39A-212ENST00000497993 TNFRSF9Q07011 255 aa4.2□□□□□ -1.74
TMEM39A-212ENST00000497993 OR2F1Q13607 317 aa4.2□□□□□ -1.74
TMEM39A-212ENST00000497993 SP6Q3SY56 376 aa4.2□□□□□ -1.74
TMEM39A-212ENST00000497993 ZNF493Q6ZR52 646 aa4.2□□□□□ -1.74
TMEM39A-212ENST00000497993 LINC00173Q6ZV60 143 aa4.2□□□□□ -1.74
TMEM39A-212ENST00000497993 GTSCR1Q86UQ5 136 aa4.2□□□□□ -1.74
TMEM39A-212ENST00000497993 TOMM5Q8N4H5 51 aa4.2□□□□□ -1.74
TMEM39A-212ENST00000497993 SLC35G3Q8N808 338 aa4.2□□□□□ -1.74
TMEM39A-212ENST00000497993 ASB13Q8WXK3 278 aa4.2□□□□□ -1.74
TMEM39A-212ENST00000497993 CCDC32Q9BV29 185 aa4.2□□□□□ -1.74
TMEM39A-212ENST00000497993 U3KQ87 197 aa4.2□□□□□ -1.74
TMEM39A-212ENST00000497993 TRAV30A0A087WSZ9 112 aa4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 A0A087X002 238 aa4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 IGHV3-35A0A0C4DH35 117 aa4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 IGHV7-4-1A0A0J9YVY3 117 aa4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 A0A0J9YXV3 536 aa4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 OR2T8A6NH00 312 aa4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 C3orf84H3BNL1 204 aa4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 PEX7O00628 323 aa4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 ZNF253O75346 499 aa4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 SFT2D2O95562 160 aa4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 IGLC1P0CG04 106 aa4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 CHTF8P0CG12 524 aa4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 IL7P13232 177 aa4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 CRYBB3P26998 211 aa4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 YPEL3P61236 119 aaPredicted RBP4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 CXCL6P80162 114 aa4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 RPL19P84098 196 aaKnown RBP4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 CD300CQ08708 224 aa4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 PPP1R1AQ13522 171 aa4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 SMCO1Q147U7 214 aa4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 PYDC2Q56P42 97 aa4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 DEFB121Q5J5C9 76 aa4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 KRTAP5-3Q6L8H2 238 aa4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 DYNLRB2Q8TF09 96 aa4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 PDCD10Q9BUL8 212 aa4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 MRPL36Q9P0J6 103 aaKnown RBP4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 SMPXQ9UHP9 88 aa4.19□□□□□ -1.74
TMEM39A-212ENST00000497993 SACSQ9NZJ4 4579 aa4.18□□□□□ -1.74
TMEM39A-212ENST00000497993 RBFOX3A6NFN3 312 aa4.18□□□□□ -1.74
TMEM39A-212ENST00000497993 PSPHP1O15172 72 aa4.18□□□□□ -1.74
TMEM39A-212ENST00000497993 NDUFS5O43920 106 aa4.18□□□□□ -1.74
TMEM39A-212ENST00000497993 GNG7O60262 68 aa4.18□□□□□ -1.74
TMEM39A-212ENST00000497993 IFNA17P01571 189 aa4.18□□□□□ -1.74
TMEM39A-212ENST00000497993 IGHV3-23P01764 117 aa4.18□□□□□ -1.74
TMEM39A-212ENST00000497993 CD7P09564 240 aa4.18□□□□□ -1.74
TMEM39A-212ENST00000497993 NPY1RP25929 384 aa4.18□□□□□ -1.74
TMEM39A-212ENST00000497993 SNCAP37840 140 aa4.18□□□□□ -1.74
TMEM39A-212ENST00000497993 ZNF138P52744 262 aa4.18□□□□□ -1.74
TMEM39A-212ENST00000497993 SMAGPQ0VAQ4 97 aa4.18□□□□□ -1.74
TMEM39A-212ENST00000497993 IL15RAQ13261 267 aa4.18□□□□□ -1.74
TMEM39A-212ENST00000497993 CASC10Q5T4H9 136 aa4.18□□□□□ -1.74
TMEM39A-212ENST00000497993 PRSS54Q6PEW0 395 aa4.18□□□□□ -1.74
TMEM39A-212ENST00000497993 SLC16A13Q7RTY0 426 aa4.18□□□□□ -1.74
TMEM39A-212ENST00000497993 LYZL2Q7Z4W2 148 aa4.18□□□□□ -1.74
TMEM39A-212ENST00000497993 COMMD7Q86VX2 200 aa4.18□□□□□ -1.74
TMEM39A-212ENST00000497993 GINS3Q9BRX5 216 aa4.18□□□□□ -1.74
TMEM39A-212ENST00000497993 SLC25A2Q9BXI2 301 aa4.18□□□□□ -1.74
TMEM39A-212ENST00000497993 S4R3C0 116 aa4.18□□□□□ -1.74
TMEM39A-212ENST00000497993 DNAH1Q9P2D7 4330 aa4.18□□□□□ -1.74
TMEM39A-212ENST00000497993 TRAV8-2A0A0B4J237 113 aa4.17□□□□□ -1.74
TMEM39A-212ENST00000497993 A0A0U1RQV1 116 aa4.17□□□□□ -1.74
TMEM39A-212ENST00000497993 C9orf170A2RU37 121 aa4.17□□□□□ -1.74
TMEM39A-212ENST00000497993 OR4C46A6NHA9 309 aa4.17□□□□□ -1.74
TMEM39A-212ENST00000497993 OR11H12B2RN74 326 aa4.17□□□□□ -1.74
TMEM39A-212ENST00000497993 FNDC10F2Z333 226 aa4.17□□□□□ -1.74
TMEM39A-212ENST00000497993 CMC4P56277 68 aaPredicted RBP4.17□□□□□ -1.74
TMEM39A-212ENST00000497993 DEFA1P59665 94 aa4.17□□□□□ -1.74
TMEM39A-212ENST00000497993 DEFA3P59666 94 aa4.17□□□□□ -1.74
TMEM39A-212ENST00000497993 RAB4BP61018 213 aa4.17□□□□□ -1.74
TMEM39A-212ENST00000497993 HERVK_113P61574 105 aa4.17□□□□□ -1.74
TMEM39A-212ENST00000497993 IFITM3Q01628 133 aa4.17□□□□□ -1.74
TMEM39A-212ENST00000497993 DHRS2Q13268 280 aa4.17□□□□□ -1.74
TMEM39A-212ENST00000497993 Q56UQ5 140 aa4.17□□□□□ -1.74
TMEM39A-212ENST00000497993 FAM162BQ5T6X4 162 aa4.17□□□□□ -1.74
TMEM39A-212ENST00000497993 TRIQKQ629K1 86 aa4.17□□□□□ -1.74
TMEM39A-212ENST00000497993 TOMM20LQ6UXN7 152 aa4.17□□□□□ -1.74
TMEM39A-212ENST00000497993 S100A7AQ86SG5 101 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms