RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 LHBP01229 141 aa10.22□□□□□ -0.77
GAPVD1-220ENST00000497580 TTC32Q5I0X7 151 aa10.22□□□□□ -0.77
GAPVD1-220ENST00000497580 GAGE2BQ13066 116 aa10.21□□□□□ -0.77
GAPVD1-220ENST00000497580 TAL2Q16559 108 aa10.21□□□□□ -0.77
GAPVD1-220ENST00000497580 GAGE2EQ4V326 116 aa10.21□□□□□ -0.77
GAPVD1-220ENST00000497580 TMEM200BQ69YZ2 307 aa10.21□□□□□ -0.77
GAPVD1-220ENST00000497580 ANKRD29Q8N6D5 301 aa10.21□□□□□ -0.77
GAPVD1-220ENST00000497580 TMEM14CQ9P0S9 112 aa10.21□□□□□ -0.77
GAPVD1-220ENST00000497580 GAGE2DQ9UEU5 116 aa10.21□□□□□ -0.77
GAPVD1-220ENST00000497580 ASH1LQ9NR48 2969 aaKnown RBP10.21□□□□□ -0.77
GAPVD1-220ENST00000497580 TRGV3P03979 118 aa10.21□□□□□ -0.77
GAPVD1-220ENST00000497580 DTX2Q86UW9 622 aa10.21□□□□□ -0.77
GAPVD1-220ENST00000497580 TEN1Q86WV5 123 aa10.21□□□□□ -0.77
GAPVD1-220ENST00000497580 IGFBPL1Q8WX77 278 aa10.21□□□□□ -0.77
GAPVD1-220ENST00000497580 NOTCH3Q9UM47 2321 aa10.21□□□□□ -0.78
GAPVD1-220ENST00000497580 SNCGO76070 127 aa10.21□□□□□ -0.78
GAPVD1-220ENST00000497580 ZNF688P0C7X2 276 aa10.21□□□□□ -0.78
GAPVD1-220ENST00000497580 KLHL30-AS1Q8NEE0 82 aa10.21□□□□□ -0.78
GAPVD1-220ENST00000497580 SPRY2O43597 315 aa10.2□□□□□ -0.78
GAPVD1-220ENST00000497580 HOXB4P17483 251 aaPredicted RBP10.2□□□□□ -0.78
GAPVD1-220ENST00000497580 ERCC8Q13216 396 aa10.2□□□□□ -0.78
GAPVD1-220ENST00000497580 PRR25Q96S07 402 aa10.2□□□□□ -0.78
GAPVD1-220ENST00000497580 SHISA9B4DS77 424 aa10.2□□□□□ -0.78
GAPVD1-220ENST00000497580 J3KRW8 73 aa10.2□□□□□ -0.78
GAPVD1-220ENST00000497580 TM4SF5O14894 197 aa10.2□□□□□ -0.78
GAPVD1-220ENST00000497580 IGHV1-46P01743 117 aa10.2□□□□□ -0.78
GAPVD1-220ENST00000497580 PLEKHB2Q96CS7 222 aa10.2□□□□□ -0.78
GAPVD1-220ENST00000497580 A6NJY4 79 aa10.2□□□□□ -0.78
GAPVD1-220ENST00000497580 TCL1BO95988 128 aa10.2□□□□□ -0.78
GAPVD1-220ENST00000497580 LAGE3Q14657 143 aa10.2□□□□□ -0.78
GAPVD1-220ENST00000497580 PSMG4Q5JS54 123 aa10.2□□□□□ -0.78
GAPVD1-220ENST00000497580 PIFOQ8TCI5 191 aa10.2□□□□□ -0.78
GAPVD1-220ENST00000497580 LRBAP50851 2863 aa10.2□□□□□ -0.78
GAPVD1-220ENST00000497580 A0A087WX48 190 aa10.19□□□□□ -0.78
GAPVD1-220ENST00000497580 LGALS1P09382 135 aaKnown RBP10.19□□□□□ -0.78
GAPVD1-220ENST00000497580 SLC25A16P16260 332 aa10.19□□□□□ -0.78
GAPVD1-220ENST00000497580 COX7A1P24310 79 aa10.19□□□□□ -0.78
GAPVD1-220ENST00000497580 PRADC1Q9BSG0 188 aa10.19□□□□□ -0.78
GAPVD1-220ENST00000497580 OTOGLQ3ZCN5 2332 aa10.19□□□□□ -0.78
GAPVD1-220ENST00000497580 INS-IGF2F8WCM5 200 aa10.19□□□□□ -0.78
GAPVD1-220ENST00000497580 WT1P19544 449 aaPredicted RBP10.19□□□□□ -0.78
GAPVD1-220ENST00000497580 HIF1ANQ9NWT6 349 aa10.19□□□□□ -0.78
GAPVD1-220ENST00000497580 ONECUT1Q9UBC0 465 aa10.19□□□□□ -0.78
GAPVD1-220ENST00000497580 H3BRN7 92 aa10.19□□□□□ -0.78
GAPVD1-220ENST00000497580 MDS2Q8NDY4 140 aa10.19□□□□□ -0.78
GAPVD1-220ENST00000497580 RAX2Q96IS3 184 aa10.19□□□□□ -0.78
GAPVD1-220ENST00000497580 SCGB3A1Q96QR1 104 aa10.19□□□□□ -0.78
GAPVD1-220ENST00000497580 FAM27E3Q08E93 113 aa10.18□□□□□ -0.78
GAPVD1-220ENST00000497580 Q8N8P6 123 aa10.18□□□□□ -0.78
GAPVD1-220ENST00000497580 ATP6V0E2Q8NHE4 81 aa10.18□□□□□ -0.78
GAPVD1-220ENST00000497580 AJUBAQ96IF1 538 aa10.18□□□□□ -0.78
GAPVD1-220ENST00000497580 C9JAW5 83 aa10.18□□□□□ -0.78
GAPVD1-220ENST00000497580 ARHGAP32A7KAX9 2087 aa10.18□□□□□ -0.78
GAPVD1-220ENST00000497580 IGHV3OR16-13A0A075B7E8 117 aa10.18□□□□□ -0.78
GAPVD1-220ENST00000497580 IGHV3-74A0A0B4J1X5 117 aa10.18□□□□□ -0.78
GAPVD1-220ENST00000497580 GAGE12JA6NER3 117 aa10.18□□□□□ -0.78
GAPVD1-220ENST00000497580 GAGE7O76087 117 aa10.18□□□□□ -0.78
GAPVD1-220ENST00000497580 GAGE12FP0CL80 117 aa10.18□□□□□ -0.78
GAPVD1-220ENST00000497580 GAGE12GP0CL81 117 aa10.18□□□□□ -0.78
GAPVD1-220ENST00000497580 GAGE12IP0CL82 117 aa10.18□□□□□ -0.78
GAPVD1-220ENST00000497580 PLNP26678 52 aa10.18□□□□□ -0.78
GAPVD1-220ENST00000497580 GAGE4Q13068 117 aa10.18□□□□□ -0.78
GAPVD1-220ENST00000497580 ZNF491Q8N8L2 437 aa10.18□□□□□ -0.78
GAPVD1-220ENST00000497580 BEX4Q9NWD9 120 aaPredicted RBP10.18□□□□□ -0.78
GAPVD1-220ENST00000497580 ANKHD1Q8IWZ3 2542 aaKnown RBP10.17□□□□□ -0.78
GAPVD1-220ENST00000497580 TRAV4A0A0B4J268 109 aa10.17□□□□□ -0.78
GAPVD1-220ENST00000497580 IGLV1-44P01699 117 aa10.17□□□□□ -0.78
GAPVD1-220ENST00000497580 CLEC3BP05452 202 aa10.17□□□□□ -0.78
GAPVD1-220ENST00000497580 RPL7P18124 248 aaKnown RBP10.17□□□□□ -0.78
GAPVD1-220ENST00000497580 RPL32P62910 135 aaKnown RBP10.17□□□□□ -0.78
GAPVD1-220ENST00000497580 LYPD2Q6UXB3 125 aa10.17□□□□□ -0.78
GAPVD1-220ENST00000497580 PPP1R27Q86WC6 154 aa10.17□□□□□ -0.78
GAPVD1-220ENST00000497580 SIGLEC9Q9Y336 463 aa10.17□□□□□ -0.78
GAPVD1-220ENST00000497580 F8VRH5 84 aa10.17□□□□□ -0.78
GAPVD1-220ENST00000497580 H7C1H1 209 aa10.17□□□□□ -0.78
GAPVD1-220ENST00000497580 SPANXN1Q5VSR9 72 aa10.17□□□□□ -0.78
GAPVD1-220ENST00000497580 COL12A1Q99715 3063 aa10.16□□□□□ -0.78
GAPVD1-220ENST00000497580 ZZEF1O43149 2961 aa10.16□□□□□ -0.78
GAPVD1-220ENST00000497580 IGHV3-66A0A0C4DH42 116 aa10.16□□□□□ -0.78
GAPVD1-220ENST00000497580 VSTM5A8MXK1 200 aa10.16□□□□□ -0.78
GAPVD1-220ENST00000497580 K7EM74 188 aa10.16□□□□□ -0.78
GAPVD1-220ENST00000497580 NDUFB3O43676 98 aa10.16□□□□□ -0.78
GAPVD1-220ENST00000497580 CRLF1O75462 422 aa10.16□□□□□ -0.78
GAPVD1-220ENST00000497580 GLRXP35754 106 aa10.16□□□□□ -0.78
GAPVD1-220ENST00000497580 MRGPRG-AS1Q2M3A8 158 aa10.16□□□□□ -0.78
GAPVD1-220ENST00000497580 LYRM7Q5U5X0 104 aa10.16□□□□□ -0.78
GAPVD1-220ENST00000497580 SLC25A15Q9Y619 301 aa10.16□□□□□ -0.78
GAPVD1-220ENST00000497580 RAI1Q7Z5J4 1906 aaPredicted RBP10.16□□□□□ -0.78
GAPVD1-220ENST00000497580 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.16□□□□□ -0.781e-7■■■■□ 20.6
GAPVD1-220ENST00000497580 IGF2RP11717 2491 aa10.16□□□□□ -0.78
GAPVD1-220ENST00000497580 TRBV6-1A0A0K0K1D8 114 aa10.16□□□□□ -0.78
GAPVD1-220ENST00000497580 Q1RN00 199 aa10.16□□□□□ -0.78
GAPVD1-220ENST00000497580 OR11H6Q8NGC7 330 aa10.16□□□□□ -0.78
GAPVD1-220ENST00000497580 I3L2K1 104 aa10.15□□□□□ -0.78
GAPVD1-220ENST00000497580 IGLC6P0CF74 106 aa10.15□□□□□ -0.78
GAPVD1-220ENST00000497580 NHLRC4P0CG21 123 aaPredicted RBP10.15□□□□□ -0.78
GAPVD1-220ENST00000497580 NDUFV3P56181 108 aaKnown RBP10.15□□□□□ -0.78
GAPVD1-220ENST00000497580 FAM159AQ6UWV7 190 aa10.15□□□□□ -0.78
GAPVD1-220ENST00000497580 CD40P25942 277 aa10.15□□□□□ -0.78
GAPVD1-220ENST00000497580 FABP5P3A8MUU1 101 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms