RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 TP53TG1Q9Y2A0 90 aa6.44□□□□□ -1.38
U2AF1-212ENST00000496462 A8MWL6 223 aa6.44□□□□□ -1.38
U2AF1-212ENST00000496462 DAD1P61803 113 aa6.44□□□□□ -1.38
U2AF1-212ENST00000496462 GNG5P63218 68 aa6.44□□□□□ -1.38
U2AF1-212ENST00000496462 CCL20P78556 96 aa6.44□□□□□ -1.38
U2AF1-212ENST00000496462 C9orf47Q6ZRZ4 202 aa6.44□□□□□ -1.38
U2AF1-212ENST00000496462 OR2D3Q8NGH3 330 aa6.44□□□□□ -1.38
U2AF1-212ENST00000496462 SPXQ9BT56 116 aa6.44□□□□□ -1.38
U2AF1-212ENST00000496462 KLK5Q9Y337 293 aaPredicted RBP6.44□□□□□ -1.38
U2AF1-212ENST00000496462 ZNF705FA8MVS1 300 aaPredicted RBP6.43□□□□□ -1.38
U2AF1-212ENST00000496462 EIF3GO75821 320 aaKnown RBP eCLIP6.43□□□□□ -1.38
U2AF1-212ENST00000496462 DEFB135Q30KP9 77 aa6.43□□□□□ -1.38
U2AF1-212ENST00000496462 ODF3L2Q3SX64 289 aa6.43□□□□□ -1.38
U2AF1-212ENST00000496462 SPANXN1Q5VSR9 72 aa6.43□□□□□ -1.38
U2AF1-212ENST00000496462 C16orf74Q96GX8 76 aa6.43□□□□□ -1.38
U2AF1-212ENST00000496462 CLUHP3Q96NS8 147 aa6.43□□□□□ -1.38
U2AF1-212ENST00000496462 ZNF492Q9P255 531 aa6.43□□□□□ -1.38
U2AF1-212ENST00000496462 IGHV1OR15-1A0A075B7D0 117 aa6.43□□□□□ -1.38
U2AF1-212ENST00000496462 PMS2P11Q13670 270 aa6.43□□□□□ -1.38
U2AF1-212ENST00000496462 TMEM183BQ1AE95 376 aa6.43□□□□□ -1.38
U2AF1-212ENST00000496462 TVP23CQ96ET8 276 aa6.43□□□□□ -1.38
U2AF1-212ENST00000496462 CITED4Q96RK1 184 aa6.43□□□□□ -1.38
U2AF1-212ENST00000496462 B4DEV8 164 aa6.43□□□□□ -1.38
U2AF1-212ENST00000496462 NPIPB6E9PJ23 425 aa6.43□□□□□ -1.38
U2AF1-212ENST00000496462 NDUFS6O75380 124 aaKnown RBP6.43□□□□□ -1.38
U2AF1-212ENST00000496462 S100A1P23297 94 aa6.43□□□□□ -1.38
U2AF1-212ENST00000496462 ATP5G3P48201 142 aa6.43□□□□□ -1.38
U2AF1-212ENST00000496462 A0A1W2PPQ1 181 aa6.42□□□□□ -1.38
U2AF1-212ENST00000496462 TRGC1P0CF51 173 aa6.42□□□□□ -1.38
U2AF1-212ENST00000496462 RPL35P42766 123 aaKnown RBP6.42□□□□□ -1.38
U2AF1-212ENST00000496462 SLAQ13239 276 aa6.42□□□□□ -1.38
U2AF1-212ENST00000496462 C17orf77Q96MU5 243 aa6.42□□□□□ -1.38
U2AF1-212ENST00000496462 AGPAT4-IT1Q9H0P7 198 aa6.42□□□□□ -1.38
U2AF1-212ENST00000496462 G3V3Q6 166 aa6.42□□□□□ -1.38
U2AF1-212ENST00000496462 B9D2Q9BPU9 175 aa6.42□□□□□ -1.38
U2AF1-212ENST00000496462 SORL1Q92673 2214 aa6.42□□□□□ -1.38
U2AF1-212ENST00000496462 TRAV34A0A0B4J273 112 aa6.42□□□□□ -1.38
U2AF1-212ENST00000496462 F6UB75 175 aa6.42□□□□□ -1.38
U2AF1-212ENST00000496462 ERCC8Q13216 396 aa6.42□□□□□ -1.38
U2AF1-212ENST00000496462 CENPWQ5EE01 88 aa6.42□□□□□ -1.38
U2AF1-212ENST00000496462 TRPT1Q86TN4 253 aaKnown RBP6.42□□□□□ -1.38
U2AF1-212ENST00000496462 TGP01266 2768 aa6.42□□□□□ -1.38
U2AF1-212ENST00000496462 SCO2A0A1W2PP80 73 aa6.42□□□□□ -1.38
U2AF1-212ENST00000496462 M0R2Z0 102 aa6.42□□□□□ -1.38
U2AF1-212ENST00000496462 RIGQ13278 110 aa6.42□□□□□ -1.38
U2AF1-212ENST00000496462 Q6AWC8 147 aa6.42□□□□□ -1.38
U2AF1-212ENST00000496462 U3KQK5 164 aa6.42□□□□□ -1.38
U2AF1-212ENST00000496462 KRBOX1C9JBD0 128 aa6.41□□□□□ -1.38
U2AF1-212ENST00000496462 SLC17A3O00476 420 aa6.41□□□□□ -1.38
U2AF1-212ENST00000496462 HTN3P15516 51 aa6.41□□□□□ -1.38
U2AF1-212ENST00000496462 TMEM183AQ8IXX5 376 aa6.41□□□□□ -1.38
U2AF1-212ENST00000496462 OR10G8Q8NGN5 311 aa6.41□□□□□ -1.38
U2AF1-212ENST00000496462 SGK494Q96LW2 274 aa6.41□□□□□ -1.38
U2AF1-212ENST00000496462 A8MZ25 164 aa6.41□□□□□ -1.38
U2AF1-212ENST00000496462 F5H697 171 aa6.41□□□□□ -1.38
U2AF1-212ENST00000496462 SNAPINO95295 136 aa6.41□□□□□ -1.38
U2AF1-212ENST00000496462 MORN5Q5VZ52 161 aa6.41□□□□□ -1.38
U2AF1-212ENST00000496462 Q86TA4 180 aa6.41□□□□□ -1.38
U2AF1-212ENST00000496462 YTHDF2Q9Y5A9 579 aaKnown RBP6.41□□□□□ -1.38
U2AF1-212ENST00000496462 ZNF705DP0CH99 300 aaPredicted RBP6.41□□□□□ -1.38
U2AF1-212ENST00000496462 ZNF705BP0CI00 300 aaPredicted RBP6.41□□□□□ -1.38
U2AF1-212ENST00000496462 HLA-DMBP28068 263 aa6.41□□□□□ -1.38
U2AF1-212ENST00000496462 MUC21Q5SSG8 566 aa6.41□□□□□ -1.38
U2AF1-212ENST00000496462 H7C1H1 209 aa6.4□□□□□ -1.38
U2AF1-212ENST00000496462 PFN1P07737 140 aaKnown RBP6.4□□□□□ -1.38
U2AF1-212ENST00000496462 CTAG1AP78358 180 aa6.4□□□□□ -1.38
U2AF1-212ENST00000496462 MAJINQ3KP22 176 aa6.4□□□□□ -1.38
U2AF1-212ENST00000496462 IBA57Q5T440 356 aaKnown RBP6.4□□□□□ -1.38
U2AF1-212ENST00000496462 Q8TAT8 98 aa6.4□□□□□ -1.38
U2AF1-212ENST00000496462 LY96Q9Y6Y9 160 aa6.4□□□□□ -1.38
U2AF1-212ENST00000496462 C9JCJ5 164 aa6.4□□□□□ -1.39
U2AF1-212ENST00000496462 CACNG7P62955 275 aa6.4□□□□□ -1.39
U2AF1-212ENST00000496462 SVBPQ8N300 66 aa6.4□□□□□ -1.39
U2AF1-212ENST00000496462 ANAPC16Q96DE5 110 aa6.4□□□□□ -1.39
U2AF1-212ENST00000496462 PARLQ9H300 379 aa6.4□□□□□ -1.39
U2AF1-212ENST00000496462 TMSB15BA0A087X1C1 80 aa6.4□□□□□ -1.39
U2AF1-212ENST00000496462 TRGV4A0A0C4DH28 118 aa6.4□□□□□ -1.39
U2AF1-212ENST00000496462 RAB4BP61018 213 aa6.4□□□□□ -1.39
U2AF1-212ENST00000496462 ZFP82Q8N141 532 aa6.4□□□□□ -1.39
U2AF1-212ENST00000496462 TRGV1A0A0A0MS02 117 aa6.39□□□□□ -1.39
U2AF1-212ENST00000496462 CIDEAO60543 219 aa6.39□□□□□ -1.39
U2AF1-212ENST00000496462 ZNF726P1Q15940 193 aa6.39□□□□□ -1.39
U2AF1-212ENST00000496462 TRBV6-1A0A0K0K1D8 114 aa6.39□□□□□ -1.39
U2AF1-212ENST00000496462 LYRM9A8MSI8 78 aa6.39□□□□□ -1.39
U2AF1-212ENST00000496462 GGTLC3B5MD39 225 aa6.39□□□□□ -1.39
U2AF1-212ENST00000496462 F2Z2F3 143 aa6.39□□□□□ -1.39
U2AF1-212ENST00000496462 SMAGPQ0VAQ4 97 aa6.39□□□□□ -1.39
U2AF1-212ENST00000496462 ADAMTSL5Q6ZMM2 481 aa6.39□□□□□ -1.39
U2AF1-212ENST00000496462 VGLL1Q99990 258 aa6.39□□□□□ -1.39
U2AF1-212ENST00000496462 TRAV12-2A0A075B6T6 113 aa6.39□□□□□ -1.39
U2AF1-212ENST00000496462 SFTA3P0C7M3 94 aa6.39□□□□□ -1.39
U2AF1-212ENST00000496462 COX19Q49B96 90 aa6.39□□□□□ -1.39
U2AF1-212ENST00000496462 TRAV8-2A0A0B4J237 113 aa6.38□□□□□ -1.39
U2AF1-212ENST00000496462 RHODO00212 210 aa6.38□□□□□ -1.39
U2AF1-212ENST00000496462 APOC3P02656 99 aa6.38□□□□□ -1.39
U2AF1-212ENST00000496462 EDN2P20800 178 aa6.38□□□□□ -1.39
U2AF1-212ENST00000496462 KPRPQ5T749 579 aaPredicted RBP6.38□□□□□ -1.39
U2AF1-212ENST00000496462 OR4C5Q8NGB2 326 aa6.38□□□□□ -1.39
U2AF1-212ENST00000496462 C11orf45Q8TAV5 145 aa6.38□□□□□ -1.39
U2AF1-212ENST00000496462 TMEM263Q8WUH6 116 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms