RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 CRIP1P50238 77 aa7.11□□□□□ -1.27
HPS4-217ENST00000496385 MEIG1Q5JSS6 88 aa7.11□□□□□ -1.27
HPS4-217ENST00000496385 MRPL35Q9NZE8 188 aaKnown RBP7.11□□□□□ -1.27
HPS4-217ENST00000496385 HIGD1AQ9Y241 93 aa7.11□□□□□ -1.27
HPS4-217ENST00000496385 POLEQ07864 2286 aa7.11□□□□□ -1.27
HPS4-217ENST00000496385 ADGRG4Q8IZF6 3080 aa7.11□□□□□ -1.27
HPS4-217ENST00000496385 UBR5O95071 2799 aaPredicted RBP7.11□□□□□ -1.27
HPS4-217ENST00000496385 C17orf58Q2M2W7 97 aa7.11□□□□□ -1.27
HPS4-217ENST00000496385 FAM159AQ6UWV7 190 aa7.11□□□□□ -1.27
HPS4-217ENST00000496385 WFDC3Q8IUB2 231 aa7.11□□□□□ -1.27
HPS4-217ENST00000496385 KLF14Q8TD94 323 aaPredicted RBP7.11□□□□□ -1.27
HPS4-217ENST00000496385 DNAJC30Q96LL9 226 aa7.11□□□□□ -1.27
HPS4-217ENST00000496385 KIR2DL4Q99706 377 aa7.11□□□□□ -1.27
HPS4-217ENST00000496385 TPPP3Q9BW30 176 aa7.11□□□□□ -1.27
HPS4-217ENST00000496385 LINC00574Q9H8X3 128 aa7.11□□□□□ -1.27
HPS4-217ENST00000496385 FREM1Q5H8C1 2179 aa7.11□□□□□ -1.27
HPS4-217ENST00000496385 USP9XQ93008 2570 aaPredicted RBP7.1□□□□□ -1.27
HPS4-217ENST00000496385 TRAV4A0A0B4J268 109 aa7.1□□□□□ -1.27
HPS4-217ENST00000496385 SRRM5B3KS81 715 aa7.1□□□□□ -1.27
HPS4-217ENST00000496385 H7C1H1 209 aa7.1□□□□□ -1.27
HPS4-217ENST00000496385 SPRNQ5BIV9 151 aa7.1□□□□□ -1.27
HPS4-217ENST00000496385 TMEM78Q5T7P6 136 aa7.1□□□□□ -1.27
HPS4-217ENST00000496385 CXorf67Q86X51 503 aaPredicted RBP7.1□□□□□ -1.27
HPS4-217ENST00000496385 RASL10AQ92737 203 aa7.1□□□□□ -1.27
HPS4-217ENST00000496385 CNFNQ9BYD5 112 aa7.1□□□□□ -1.27
HPS4-217ENST00000496385 ZFP2Q6ZN57 461 aa7.1□□□□□ -1.27
HPS4-217ENST00000496385 IGKV1D-17A0A075B6S4 117 aa7.09□□□□□ -1.27
HPS4-217ENST00000496385 TRAV8-2A0A0B4J237 113 aa7.09□□□□□ -1.27
HPS4-217ENST00000496385 IGHV3-64DA0A0J9YX35 117 aa7.09□□□□□ -1.27
HPS4-217ENST00000496385 F8VRH5 84 aa7.09□□□□□ -1.27
HPS4-217ENST00000496385 TNFRSF6BO95407 300 aa7.09□□□□□ -1.27
HPS4-217ENST00000496385 TCL1BO95988 128 aa7.09□□□□□ -1.27
HPS4-217ENST00000496385 IGHG3P01860 377 aa7.09□□□□□ -1.27
HPS4-217ENST00000496385 IGKV1-16P04430 117 aa7.09□□□□□ -1.27
HPS4-217ENST00000496385 LGALS1P09382 135 aaKnown RBP7.09□□□□□ -1.27
HPS4-217ENST00000496385 CD7P09564 240 aa7.09□□□□□ -1.27
HPS4-217ENST00000496385 ID1P41134 155 aa7.09□□□□□ -1.27
HPS4-217ENST00000496385 WT1-ASQ06250 92 aa7.09□□□□□ -1.27
HPS4-217ENST00000496385 LRRK2Q5S007 2527 aa7.09□□□□□ -1.27
HPS4-217ENST00000496385 TRBV19A0A075B6N1 114 aa7.09□□□□□ -1.27
HPS4-217ENST00000496385 RNF185Q96GF1 192 aa7.09□□□□□ -1.27
HPS4-217ENST00000496385 SLC25A20O43772 301 aa7.08□□□□□ -1.28
HPS4-217ENST00000496385 TFF1P04155 84 aa7.08□□□□□ -1.28
HPS4-217ENST00000496385 IGLC6P0CF74 106 aa7.08□□□□□ -1.28
HPS4-217ENST00000496385 PLA2G2AP14555 144 aa7.08□□□□□ -1.28
HPS4-217ENST00000496385 RPL13AP40429 203 aaKnown RBP7.08□□□□□ -1.28
HPS4-217ENST00000496385 NDUFA11Q86Y39 141 aa7.08□□□□□ -1.28
HPS4-217ENST00000496385 AAMDCQ9H7C9 122 aa7.08□□□□□ -1.28
HPS4-217ENST00000496385 SPTAN1Q13813 2472 aaKnown RBP7.08□□□□□ -1.28
HPS4-217ENST00000496385 IGLV2-18A0A075B6J9 118 aa7.08□□□□□ -1.28
HPS4-217ENST00000496385 ZNF833PQ6ZTB9 187 aa7.08□□□□□ -1.28
HPS4-217ENST00000496385 EXOC3-AS1Q8N2X6 119 aa7.08□□□□□ -1.28
HPS4-217ENST00000496385 MRPL36Q9P0J6 103 aaKnown RBP7.08□□□□□ -1.28
HPS4-217ENST00000496385 PROCRQ9UNN8 238 aa7.08□□□□□ -1.28
HPS4-217ENST00000496385 SPTBN1Q01082 2364 aaKnown RBP7.08□□□□□ -1.28
HPS4-217ENST00000496385 SMKR1H3BMG3 65 aa7.08□□□□□ -1.28
HPS4-217ENST00000496385 IGHV3-13P01766 116 aa7.08□□□□□ -1.28
HPS4-217ENST00000496385 LAGE3Q14657 143 aa7.08□□□□□ -1.28
HPS4-217ENST00000496385 ANXA2RQ3ZCQ2 193 aa7.08□□□□□ -1.28
HPS4-217ENST00000496385 PPDPFQ9H3Y8 114 aa7.08□□□□□ -1.28
HPS4-217ENST00000496385 NGBQ9NPG2 151 aa7.08□□□□□ -1.28
HPS4-217ENST00000496385 CSDC2Q9Y534 153 aaKnown RBP7.08□□□□□ -1.28
HPS4-217ENST00000496385 CGB1A6NKQ9 187 aa7.07□□□□□ -1.28
HPS4-217ENST00000496385 SH2D1AO60880 128 aa7.07□□□□□ -1.28
HPS4-217ENST00000496385 HLA-DMBP28068 263 aa7.07□□□□□ -1.28
HPS4-217ENST00000496385 PDE6HQ13956 83 aa7.07□□□□□ -1.28
HPS4-217ENST00000496385 SIGLEC15Q6ZMC9 328 aa7.07□□□□□ -1.28
HPS4-217ENST00000496385 C10orf126Q8N4M7 172 aa7.07□□□□□ -1.28
HPS4-217ENST00000496385 MRPL20Q9BYC9 149 aaKnown RBP7.07□□□□□ -1.28
HPS4-217ENST00000496385 TNCP24821 2201 aa7.07□□□□□ -1.28
HPS4-217ENST00000496385 CCL21O00585 134 aa7.07□□□□□ -1.28
HPS4-217ENST00000496385 TIMM8AO60220 97 aaPredicted RBP7.07□□□□□ -1.28
HPS4-217ENST00000496385 CD40P25942 277 aa7.07□□□□□ -1.28
HPS4-217ENST00000496385 SRSF9Q13242 221 aaKnown RBP eCLIP7.07□□□□□ -1.28
HPS4-217ENST00000496385 LRRC75A-AS1Q8N1F1 130 aa7.07□□□□□ -1.28
HPS4-217ENST00000496385 LEAP2Q969E1 77 aa7.07□□□□□ -1.28
HPS4-217ENST00000496385 SRSF8Q9BRL6 282 aaKnown RBP7.07□□□□□ -1.28
HPS4-217ENST00000496385 H3BVH4 76 aa7.06□□□□□ -1.28
HPS4-217ENST00000496385 HES1Q14469 280 aa7.06□□□□□ -1.28
HPS4-217ENST00000496385 FAM57AQ8TBR7 257 aa7.06□□□□□ -1.28
HPS4-217ENST00000496385 RPUSD1Q9UJJ7 312 aaKnown RBP7.06□□□□□ -1.28
HPS4-217ENST00000496385 SIGLEC9Q9Y336 463 aa7.06□□□□□ -1.28
HPS4-217ENST00000496385 FAM215AQ9Y5M1 114 aa7.06□□□□□ -1.28
HPS4-217ENST00000496385 CRYBG3Q68DQ2 2970 aa7.06□□□□□ -1.28
HPS4-217ENST00000496385 TRAV8-4A0A0B4J246 113 aa7.06□□□□□ -1.28
HPS4-217ENST00000496385 FAM240AA0A1B0GVK7 77 aa7.06□□□□□ -1.28
HPS4-217ENST00000496385 H3BTX0 84 aa7.06□□□□□ -1.28
HPS4-217ENST00000496385 CRLF1O75462 422 aa7.06□□□□□ -1.28
HPS4-217ENST00000496385 DUSP14O95147 198 aaKnown RBP7.06□□□□□ -1.28
HPS4-217ENST00000496385 SLC25A16P16260 332 aa7.06□□□□□ -1.28
HPS4-217ENST00000496385 LINC01587Q99440 93 aa7.06□□□□□ -1.28
HPS4-217ENST00000496385 IGHV3OR15-7A0A075B7D8 119 aa7.05□□□□□ -1.28
HPS4-217ENST00000496385 A0A1B0GX51 115 aa7.05□□□□□ -1.28
HPS4-217ENST00000496385 E7EUB6 86 aa7.05□□□□□ -1.28
HPS4-217ENST00000496385 J3QKU1 62 aa7.05□□□□□ -1.28
HPS4-217ENST00000496385 NDUFA3O95167 84 aa7.05□□□□□ -1.28
HPS4-217ENST00000496385 P0DMU3 169 aa7.05□□□□□ -1.28
HPS4-217ENST00000496385 FAM231AP0DMU4 169 aa7.05□□□□□ -1.28
HPS4-217ENST00000496385 FAM231CP0DMU5 169 aa7.05□□□□□ -1.28
HPS4-217ENST00000496385 HOXA4Q00056 320 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms