RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 LENEPQ9Y5L5 61 aa12.29□□□□□ -0.44
HLA-A-208ENST00000496081 C5orf52A6NGY3 159 aa12.28□□□□□ -0.44
HLA-A-208ENST00000496081 FABP5P3A8MUU1 101 aa12.28□□□□□ -0.44
HLA-A-208ENST00000496081 ZNF688P0C7X2 276 aa12.28□□□□□ -0.44
HLA-A-208ENST00000496081 FOXA3P55318 350 aaPredicted RBP12.28□□□□□ -0.44
HLA-A-208ENST00000496081 HIST1H1AQ02539 215 aaPredicted RBP12.28□□□□□ -0.44
HLA-A-208ENST00000496081 RBPMS2Q6ZRY4 209 aaKnown RBP12.28□□□□□ -0.44
HLA-A-208ENST00000496081 PGLYRP4Q96LB8 373 aa12.28□□□□□ -0.44
HLA-A-208ENST00000496081 TMEM189A5PLL7 270 aa12.28□□□□□ -0.44
HLA-A-208ENST00000496081 ADARB2-AS1A8MUL3 147 aa12.28□□□□□ -0.44
HLA-A-208ENST00000496081 SNURFLB1AK76 121 aa12.28□□□□□ -0.44
HLA-A-208ENST00000496081 TMEM136Q6ZRR5 245 aa12.28□□□□□ -0.44
HLA-A-208ENST00000496081 C2CD3Q4AC94 2353 aa12.27□□□□□ -0.45
HLA-A-208ENST00000496081 KRTAP10-3P60369 221 aa12.27□□□□□ -0.45
HLA-A-208ENST00000496081 SNRPD3P62318 126 aaKnown RBP12.27□□□□□ -0.45
HLA-A-208ENST00000496081 COX19Q49B96 90 aa12.27□□□□□ -0.45
HLA-A-208ENST00000496081 PSMG4Q5JS54 123 aa12.27□□□□□ -0.45
HLA-A-208ENST00000496081 WDR73Q6P4I2 378 aa12.27□□□□□ -0.45
HLA-A-208ENST00000496081 LURAP1LQ8IV03 231 aa12.27□□□□□ -0.45
HLA-A-208ENST00000496081 MRPL18Q9H0U6 180 aaKnown RBP12.27□□□□□ -0.45
HLA-A-208ENST00000496081 SAV1Q9H4B6 383 aaPredicted RBP12.27□□□□□ -0.45
HLA-A-208ENST00000496081 TMSB15BA0A087X1C1 80 aa12.26□□□□□ -0.45
HLA-A-208ENST00000496081 A0A1B0GXF2 115 aa12.26□□□□□ -0.45
HLA-A-208ENST00000496081 NDUFA6P56556 154 aa12.26□□□□□ -0.45
HLA-A-208ENST00000496081 PAFAH1B2P68402 229 aa12.26□□□□□ -0.45
HLA-A-208ENST00000496081 RASL11AQ6T310 242 aa12.26□□□□□ -0.45
HLA-A-208ENST00000496081 ATP5L2Q7Z4Y8 100 aa12.26□□□□□ -0.45
HLA-A-208ENST00000496081 ZNF575Q86XF7 245 aa12.26□□□□□ -0.45
HLA-A-208ENST00000496081 FAM19A4Q96LR4 140 aa12.26□□□□□ -0.45
HLA-A-208ENST00000496081 MT-ND6P03923 174 aa12.25□□□□□ -0.45
HLA-A-208ENST00000496081 DEFB114Q30KQ6 69 aa12.25□□□□□ -0.45
HLA-A-208ENST00000496081 TMEM61Q8N0U2 210 aa12.25□□□□□ -0.45
HLA-A-208ENST00000496081 ZFAND2AQ8N6M9 145 aa12.25□□□□□ -0.45
HLA-A-208ENST00000496081 DYNLRB2Q8TF09 96 aa12.25□□□□□ -0.45
HLA-A-208ENST00000496081 WNK1Q9H4A3 2382 aa12.25□□□□□ -0.45
HLA-A-208ENST00000496081 XKRY2A2RUG3 117 aa12.25□□□□□ -0.45
HLA-A-208ENST00000496081 RAB4BP61018 213 aa12.25□□□□□ -0.45
HLA-A-208ENST00000496081 PRR9Q5T870 116 aa12.25□□□□□ -0.45
HLA-A-208ENST00000496081 GDF5OSQ5U4N7 250 aa12.25□□□□□ -0.45
HLA-A-208ENST00000496081 ORM1P02763 201 aa12.24□□□□□ -0.45
HLA-A-208ENST00000496081 CAMPP49913 170 aa12.24□□□□□ -0.45
HLA-A-208ENST00000496081 NSUN5P1Q3KNT7 163 aa12.24□□□□□ -0.45
HLA-A-208ENST00000496081 C11orf21Q9P2W6 132 aa12.24□□□□□ -0.45
HLA-A-208ENST00000496081 TRAV2A0A0B4J234 112 aa12.23□□□□□ -0.45
HLA-A-208ENST00000496081 TRBV7-9A0A0J9YWB2 115 aa12.23□□□□□ -0.45
HLA-A-208ENST00000496081 HLA-DQA1P01909 254 aa12.23□□□□□ -0.45
HLA-A-208ENST00000496081 CD33P20138 364 aa12.23□□□□□ -0.45
HLA-A-208ENST00000496081 RPS20P60866 119 aaKnown RBP12.23□□□□□ -0.45
HLA-A-208ENST00000496081 HBBP68871 147 aa12.23□□□□□ -0.45
HLA-A-208ENST00000496081 LINC01559Q495D7 138 aa12.23□□□□□ -0.45
HLA-A-208ENST00000496081 Q6AWC8 147 aa12.23□□□□□ -0.45
HLA-A-208ENST00000496081 Q6ZQT7 251 aa12.23□□□□□ -0.45
HLA-A-208ENST00000496081 SORL1Q92673 2214 aa12.23□□□□□ -0.45
HLA-A-208ENST00000496081 A0A0J9YX75 114 aa12.23□□□□□ -0.45
HLA-A-208ENST00000496081 UBE2CO00762 179 aa12.23□□□□□ -0.45
HLA-A-208ENST00000496081 CRISP2P16562 243 aa12.23□□□□□ -0.45
HLA-A-208ENST00000496081 CD300EQ496F6 205 aaPredicted RBP12.23□□□□□ -0.45
HLA-A-208ENST00000496081 NIPBLQ6KC79 2804 aaeCLIP12.22□□□□□ -0.45
HLA-A-208ENST00000496081 IGKV3D-20A0A0C4DH25 116 aa12.22□□□□□ -0.45
HLA-A-208ENST00000496081 A0A1B0GUS0 222 aa12.22□□□□□ -0.45
HLA-A-208ENST00000496081 J3KRW8 73 aa12.22□□□□□ -0.45
HLA-A-208ENST00000496081 ARMS2P0C7Q2 107 aa12.22□□□□□ -0.45
HLA-A-208ENST00000496081 APRG1Q8IVJ8 170 aa12.22□□□□□ -0.45
HLA-A-208ENST00000496081 TPPP3Q9BW30 176 aa12.22□□□□□ -0.45
HLA-A-208ENST00000496081 SIGLEC8Q9NYZ4 499 aa12.22□□□□□ -0.45
HLA-A-208ENST00000496081 A0A1B0GUT8 65 aa12.21□□□□□ -0.45
HLA-A-208ENST00000496081 HOXA5P20719 270 aa12.21□□□□□ -0.45
HLA-A-208ENST00000496081 LYZL1Q6UWQ5 148 aa12.21□□□□□ -0.45
HLA-A-208ENST00000496081 NDUFA11Q86Y39 141 aa12.21□□□□□ -0.45
HLA-A-208ENST00000496081 GRIFINA4D1Z8 144 aa12.2□□□□□ -0.46
HLA-A-208ENST00000496081 GPX1P07203 203 aa12.2□□□□□ -0.46
HLA-A-208ENST00000496081 IGLC6P0CF74 106 aa12.2□□□□□ -0.46
HLA-A-208ENST00000496081 SLAQ13239 276 aa12.2□□□□□ -0.46
HLA-A-208ENST00000496081 KIR3DS1Q14943 382 aa12.2□□□□□ -0.46
HLA-A-208ENST00000496081 EBLN2Q6P2I7 272 aa12.2□□□□□ -0.46
HLA-A-208ENST00000496081 SSBP4Q9BWG4 385 aaPredicted RBP12.2□□□□□ -0.46
HLA-A-208ENST00000496081 APCSP02743 223 aa12.2□□□□□ -0.46
HLA-A-208ENST00000496081 KIAA1644Q3SXP7 199 aa12.2□□□□□ -0.46
HLA-A-208ENST00000496081 GFI1BQ5VTD9 330 aa12.2□□□□□ -0.46
HLA-A-208ENST00000496081 FOXI2Q6ZQN5 318 aa12.2□□□□□ -0.46
HLA-A-208ENST00000496081 TRAV25A0A0B4J276 109 aa12.19□□□□□ -0.46
HLA-A-208ENST00000496081 TRAV21A0A0B4J279 112 aa12.19□□□□□ -0.46
HLA-A-208ENST00000496081 RNASE4P34096 147 aaKnown RBP12.19□□□□□ -0.46
HLA-A-208ENST00000496081 DEFB131AP59861 70 aa12.19□□□□□ -0.46
HLA-A-208ENST00000496081 RIGQ13278 110 aa12.19□□□□□ -0.46
HLA-A-208ENST00000496081 COA6Q5JTJ3 125 aaKnown RBP12.19□□□□□ -0.46
HLA-A-208ENST00000496081 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.19□□□□□ -0.46
HLA-A-208ENST00000496081 FER1L6-AS1Q8NA97 138 aa12.19□□□□□ -0.46
HLA-A-208ENST00000496081 AGRNO00468 2067 aa12.19□□□□□ -0.46
HLA-A-208ENST00000496081 KLLNB2CW77 178 aa12.18□□□□□ -0.46
HLA-A-208ENST00000496081 CTRLP40313 264 aa12.18□□□□□ -0.46
HLA-A-208ENST00000496081 PRR31Q5SQ13 230 aa12.18□□□□□ -0.46
HLA-A-208ENST00000496081 ODF3Q96PU9 254 aa12.18□□□□□ -0.46
HLA-A-208ENST00000496081 SPAG8Q99932 426 aaPredicted RBP12.18□□□□□ -0.46
HLA-A-208ENST00000496081 DUSP14O95147 198 aaKnown RBP12.18□□□□□ -0.46
HLA-A-208ENST00000496081 IGKV3-20P01619 116 aa12.18□□□□□ -0.46
HLA-A-208ENST00000496081 BORCS7Q96B45 105 aa12.18□□□□□ -0.46
HLA-A-208ENST00000496081 ZNF256Q9Y2P7 627 aaPredicted RBP12.18□□□□□ -0.46
HLA-A-208ENST00000496081 MUC21A0A0G2JKD1 596 aa12.17□□□□□ -0.46
HLA-A-208ENST00000496081 MUC21A0A140T8X8 626 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms