RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 ATP5LO75964 103 aa6.53□□□□□ -1.36
SMARCAL1-213ENST00000496037 RAB3DO95716 219 aa6.53□□□□□ -1.36
SMARCAL1-213ENST00000496037 MT-CO2P00403 227 aa6.53□□□□□ -1.36
SMARCAL1-213ENST00000496037 GATA1P15976 413 aaPredicted RBP6.53□□□□□ -1.36
SMARCAL1-213ENST00000496037 PRSS3P35030 304 aa6.53□□□□□ -1.36
SMARCAL1-213ENST00000496037 AKR1C2P52895 323 aa6.53□□□□□ -1.36
SMARCAL1-213ENST00000496037 BRWD1-AS2P59051 145 aa6.53□□□□□ -1.36
SMARCAL1-213ENST00000496037 QRFPP83859 136 aa6.53□□□□□ -1.36
SMARCAL1-213ENST00000496037 AKR1C1Q04828 323 aa6.53□□□□□ -1.36
SMARCAL1-213ENST00000496037 C1orf100Q5SVJ3 147 aa6.53□□□□□ -1.36
SMARCAL1-213ENST00000496037 LCE5AQ5TCM9 118 aa6.53□□□□□ -1.36
SMARCAL1-213ENST00000496037 FAAP20Q6NZ36 180 aa6.53□□□□□ -1.36
SMARCAL1-213ENST00000496037 C1orf158Q8N1D5 194 aa6.53□□□□□ -1.36
SMARCAL1-213ENST00000496037 ZNF709Q8N972 641 aa6.53□□□□□ -1.36
SMARCAL1-213ENST00000496037 OR4B1Q8NGF8 309 aa6.53□□□□□ -1.36
SMARCAL1-213ENST00000496037 OR51S1Q8NGJ8 323 aa6.53□□□□□ -1.36
SMARCAL1-213ENST00000496037 OR1B1Q8NGR6 318 aa6.53□□□□□ -1.36
SMARCAL1-213ENST00000496037 PPP1R1CQ8WVI7 109 aa6.53□□□□□ -1.36
SMARCAL1-213ENST00000496037 OR2W1Q9Y3N9 320 aa6.53□□□□□ -1.36
SMARCAL1-213ENST00000496037 TEX50A0A1B0GTY4 177 aa6.52□□□□□ -1.37
SMARCAL1-213ENST00000496037 C7orf77A4D0Y5 90 aa6.52□□□□□ -1.37
SMARCAL1-213ENST00000496037 IGLV2-14P01704 120 aa6.52□□□□□ -1.37
SMARCAL1-213ENST00000496037 CD37P11049 281 aa6.52□□□□□ -1.37
SMARCAL1-213ENST00000496037 CRYBB3P26998 211 aa6.52□□□□□ -1.37
SMARCAL1-213ENST00000496037 ERVK-16P61578 105 aa6.52□□□□□ -1.37
SMARCAL1-213ENST00000496037 OR5I1Q13606 314 aa6.52□□□□□ -1.37
SMARCAL1-213ENST00000496037 POU2AF1Q16633 256 aa6.52□□□□□ -1.37
SMARCAL1-213ENST00000496037 PYY3Q5JQD4 70 aa6.52□□□□□ -1.37
SMARCAL1-213ENST00000496037 ISOC2Q96AB3 205 aa6.52□□□□□ -1.37
SMARCAL1-213ENST00000496037 TMEM56Q96MV1 263 aa6.52□□□□□ -1.37
SMARCAL1-213ENST00000496037 PRRT1Q99946 306 aa6.52□□□□□ -1.37
SMARCAL1-213ENST00000496037 KRTAP9-3Q9BYQ3 159 aa6.52□□□□□ -1.37
SMARCAL1-213ENST00000496037 NMES1Q9C002 83 aa6.52□□□□□ -1.37
SMARCAL1-213ENST00000496037 SLC35B3Q9H1N7 401 aa6.52□□□□□ -1.37
SMARCAL1-213ENST00000496037 CYTL1Q9NRR1 136 aa6.52□□□□□ -1.37
SMARCAL1-213ENST00000496037 NDUFA4L2Q9NRX3 87 aa6.52□□□□□ -1.37
SMARCAL1-213ENST00000496037 A0A0B4J2A0 478 aa6.51□□□□□ -1.37
SMARCAL1-213ENST00000496037 A0A0J9YY99 117 aa6.51□□□□□ -1.37
SMARCAL1-213ENST00000496037 A0A1B0GU03 582 aa6.51□□□□□ -1.37
SMARCAL1-213ENST00000496037 TNFSF12O43508 249 aa6.51□□□□□ -1.37
SMARCAL1-213ENST00000496037 HPRT1P00492 218 aa6.51□□□□□ -1.37
SMARCAL1-213ENST00000496037 PET100P0DJ07 73 aa6.51□□□□□ -1.37
SMARCAL1-213ENST00000496037 SULT1A2P50226 295 aa6.51□□□□□ -1.37
SMARCAL1-213ENST00000496037 UBE2MP61081 183 aaKnown RBP6.51□□□□□ -1.37
SMARCAL1-213ENST00000496037 EIF4EBP1Q13541 118 aaPredicted RBP6.51□□□□□ -1.37
SMARCAL1-213ENST00000496037 RNASE10Q5GAN6 216 aaKnown RBP6.51□□□□□ -1.37
SMARCAL1-213ENST00000496037 GDF5OSQ5U4N7 250 aa6.51□□□□□ -1.37
SMARCAL1-213ENST00000496037 MRPL52Q86TS9 123 aaKnown RBP6.51□□□□□ -1.37
SMARCAL1-213ENST00000496037 OR10R2Q8NGX6 335 aa6.51□□□□□ -1.37
SMARCAL1-213ENST00000496037 TMED6Q8WW62 240 aa6.51□□□□□ -1.37
SMARCAL1-213ENST00000496037 AQP10Q96PS8 301 aa6.51□□□□□ -1.37
SMARCAL1-213ENST00000496037 SMDT1Q9H4I9 107 aa6.51□□□□□ -1.37
SMARCAL1-213ENST00000496037 NRN1Q9NPD7 142 aa6.51□□□□□ -1.37
SMARCAL1-213ENST00000496037 SHPKQ9UHJ6 478 aa6.51□□□□□ -1.37
SMARCAL1-213ENST00000496037 IGKV1D-13A0A0B4J2D9 117 aa6.5□□□□□ -1.37
SMARCAL1-213ENST00000496037 M0R036 132 aa6.5□□□□□ -1.37
SMARCAL1-213ENST00000496037 RBFOX2O43251 390 aaKnown RBP eCLIP6.5□□□□□ -1.37
SMARCAL1-213ENST00000496037 GAS8-AS1O95177 125 aa6.5□□□□□ -1.37
SMARCAL1-213ENST00000496037 IGKV1-13P0DP09 117 aa6.5□□□□□ -1.37
SMARCAL1-213ENST00000496037 PGAM2P15259 253 aa6.5□□□□□ -1.37
SMARCAL1-213ENST00000496037 PSG9Q00887 426 aa6.5□□□□□ -1.37
SMARCAL1-213ENST00000496037 CATR1Q13166 79 aa6.5□□□□□ -1.37
SMARCAL1-213ENST00000496037 PRSS54Q6PEW0 395 aa6.5□□□□□ -1.37
SMARCAL1-213ENST00000496037 FOXI2Q6ZQN5 318 aa6.5□□□□□ -1.37
SMARCAL1-213ENST00000496037 TMED4Q7Z7H5 227 aa6.5□□□□□ -1.37
SMARCAL1-213ENST00000496037 TERB2Q8NHR7 220 aa6.5□□□□□ -1.37
SMARCAL1-213ENST00000496037 OR51B2Q9Y5P1 312 aa6.5□□□□□ -1.37
SMARCAL1-213ENST00000496037 ZNF705GA8MUZ8 300 aaPredicted RBP6.49□□□□□ -1.37
SMARCAL1-213ENST00000496037 PPP1R2P9O14990 202 aa6.49□□□□□ -1.37
SMARCAL1-213ENST00000496037 SNAI2O43623 268 aa6.49□□□□□ -1.37
SMARCAL1-213ENST00000496037 MED6O75586 246 aa6.49□□□□□ -1.37
SMARCAL1-213ENST00000496037 CD3DP04234 171 aa6.49□□□□□ -1.37
SMARCAL1-213ENST00000496037 CTXN2P0C2S0 81 aa6.49□□□□□ -1.37
SMARCAL1-213ENST00000496037 TBPP20226 339 aa6.49□□□□□ -1.37
SMARCAL1-213ENST00000496037 FGF7P21781 194 aa6.49□□□□□ -1.37
SMARCAL1-213ENST00000496037 TSPOP30536 169 aa6.49□□□□□ -1.37
SMARCAL1-213ENST00000496037 Q6ZS49 121 aa6.49□□□□□ -1.37
SMARCAL1-213ENST00000496037 PRR26Q8N8Z3 221 aa6.49□□□□□ -1.37
SMARCAL1-213ENST00000496037 OR10J6PQ8NGY7 276 aa6.49□□□□□ -1.37
SMARCAL1-213ENST00000496037 LYPD6BQ8NI32 183 aa6.49□□□□□ -1.37
SMARCAL1-213ENST00000496037 TMEM230Q96A57 120 aa6.49□□□□□ -1.37
SMARCAL1-213ENST00000496037 ATP5SQ99766 215 aa6.49□□□□□ -1.37
SMARCAL1-213ENST00000496037 PBDC1Q9BVG4 233 aa6.49□□□□□ -1.37
SMARCAL1-213ENST00000496037 V9GYY9 64 aa6.49□□□□□ -1.37
SMARCAL1-213ENST00000496037 IGKV1D-8A0A087WSZ0 117 aa6.48□□□□□ -1.37
SMARCAL1-213ENST00000496037 TRAV9-2A0A087WT02 112 aa6.48□□□□□ -1.37
SMARCAL1-213ENST00000496037 A0A087WWC5 75 aa6.48□□□□□ -1.37
SMARCAL1-213ENST00000496037 ADAP1O75689 374 aa6.48□□□□□ -1.37
SMARCAL1-213ENST00000496037 TSPAN13O95857 204 aa6.48□□□□□ -1.37
SMARCAL1-213ENST00000496037 PTHLHP12272 177 aa6.48□□□□□ -1.37
SMARCAL1-213ENST00000496037 SULT1A1P50225 295 aa6.48□□□□□ -1.37
SMARCAL1-213ENST00000496037 NDUFA6P56556 154 aa6.48□□□□□ -1.37
SMARCAL1-213ENST00000496037 CLDN12P56749 244 aa6.48□□□□□ -1.37
SMARCAL1-213ENST00000496037 DEFB1P60022 68 aa6.48□□□□□ -1.37
SMARCAL1-213ENST00000496037 SPATA31B1PQ5VZV4 182 aa6.48□□□□□ -1.37
SMARCAL1-213ENST00000496037 OR10D4PQ8NGN7 298 aa6.48□□□□□ -1.37
SMARCAL1-213ENST00000496037 IGF2BP2-AS1Q96M15 143 aa6.48□□□□□ -1.37
SMARCAL1-213ENST00000496037 YPEL4Q96NS1 127 aa6.48□□□□□ -1.37
SMARCAL1-213ENST00000496037 A0A087WZ39 114 aa6.47□□□□□ -1.37
SMARCAL1-213ENST00000496037 IFITM10A6NMD0 228 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms