RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 CENPXA8MT69 81 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 PPP1R2P9O14990 202 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 PPBPP02775 128 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 IL4P05112 153 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 ELK1P19419 428 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 NPPCP23582 126 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 OR10J1P30954 320 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 CDC34P49427 236 aaPredicted RBP2.9□□□□□ -1.95
VPS52-222ENST00000495981 PSMB3P49720 205 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 PIGPP57054 158 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 UBE2MP61081 183 aaKnown RBP2.9□□□□□ -1.95
VPS52-222ENST00000495981 YPEL3P61236 119 aaPredicted RBP2.9□□□□□ -1.95
VPS52-222ENST00000495981 NCS1P62166 190 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 ERHP84090 104 aaKnown RBP2.9□□□□□ -1.95
VPS52-222ENST00000495981 SLAQ13239 276 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 DHRS2Q13268 280 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 ZNF846Q147U1 533 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 NMSQ5H8A3 153 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 AMTNQ6UX39 209 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 GSG1LQ6UXU4 331 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 SPATA12Q7Z6I5 190 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 SNX29P2Q8IUI4 249 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 C1orf158Q8N1D5 194 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 LYPD1Q8N2G4 141 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 ARRDC1Q8N5I2 433 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 EIF4E3Q8N5X7 224 aaKnown RBP2.9□□□□□ -1.95
VPS52-222ENST00000495981 OR13C8Q8NGS7 320 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 ZNRF2Q8NHG8 242 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 LYPD6BQ8NI32 183 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 S100ZQ8WXG8 99 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 VGLL1Q99990 258 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 YTHDF1Q9BYJ9 559 aaKnown RBP2.9□□□□□ -1.95
VPS52-222ENST00000495981 ACTR3CQ9C0K3 210 aaPredicted RBP2.9□□□□□ -1.95
VPS52-222ENST00000495981 SLC35B3Q9H1N7 401 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 Q9H521 79 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 MED9Q9NWA0 146 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 YTHDF2Q9Y5A9 579 aaKnown RBP2.9□□□□□ -1.95
VPS52-222ENST00000495981 RFNGQ9Y644 331 aa2.9□□□□□ -1.95
VPS52-222ENST00000495981 C3orf85A0A1B0GTC6 90 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 TMEM189A5PLL7 270 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 KRBOX1C9JBD0 128 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 F6UB75 175 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 PTTG1O95997 202 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 IFNA17P01571 189 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 SMR3BP02814 79 aaPredicted RBP2.89□□□□□ -1.95
VPS52-222ENST00000495981 CD3DP04234 171 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 OR5AC1P0C628 307 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 SPART-AS1P0CW21 52 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 NPY1RP25929 384 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 PRSS3P35030 304 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 BTCP35070 178 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 ETV6P41212 452 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 RORCP51449 518 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 EMP1P54849 157 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 FXYD7P58549 80 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 AP3S2P59780 193 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 NUTF2P61970 127 aaKnown RBP2.89□□□□□ -1.95
VPS52-222ENST00000495981 SNRPD3P62318 126 aaKnown RBP2.89□□□□□ -1.95
VPS52-222ENST00000495981 SP6Q3SY56 376 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 C14orf177Q52M58 125 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 C2orf83Q53S99 150 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 RNASE10Q5GAN6 216 aaKnown RBP2.89□□□□□ -1.95
VPS52-222ENST00000495981 C1orf134Q5TEV5 83 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 FAAP20Q6NZ36 180 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 LPCAT3Q6P1A2 487 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 C2orf66Q6UXQ4 117 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 FOXI2Q6ZQN5 318 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 UBE2DNLQ8IWF7 75 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 ZFAND1Q8TCF1 268 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 RNASEH2CQ8TDP1 164 aaKnown RBP2.89□□□□□ -1.95
VPS52-222ENST00000495981 SFT2D1Q8WV19 159 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 S100A16Q96FQ6 103 aaKnown RBP2.89□□□□□ -1.95
VPS52-222ENST00000495981 C14orf144Q96I85 54 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 SOSTQ9BQB4 213 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 PDCD10Q9BUL8 212 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 TMEM222Q9H0R3 208 aa2.89□□□□□ -1.95
VPS52-222ENST00000495981 IGLV8-61A0A075B6I0 122 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 IGKV1OR2-108A0A075B7D4 117 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 TRAV30A0A087WSZ9 112 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 A0A0J9YX75 114 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 NBDYA0A0U1RRE5 68 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 SMIM9A6NGZ8 99 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 CRYM-AS1A6NIL9 109 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 K7EP13 123 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 CRXO43186 299 aaPredicted RBP2.88□□□□□ -1.95
VPS52-222ENST00000495981 GSTZ1O43708 216 aaPredicted RBP2.88□□□□□ -1.95
VPS52-222ENST00000495981 HPGDSO60760 199 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 GABARAPO95166 117 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 CDS2O95674 445 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 IGKV3-20P01619 116 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 NBEAP1P0C6P0 100 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 PRB4P10163 310 aaPredicted RBP2.88□□□□□ -1.95
VPS52-222ENST00000495981 SLC25A4P12235 298 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 S100GP29377 79 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 SNCAP37840 140 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 RPL35P42766 123 aaKnown RBP2.88□□□□□ -1.95
VPS52-222ENST00000495981 AKR1D1P51857 326 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 LSM3P62310 102 aaKnown RBP2.88□□□□□ -1.95
VPS52-222ENST00000495981 SUPT4H1P63272 117 aaKnown RBP2.88□□□□□ -1.95
VPS52-222ENST00000495981 HAMPP81172 84 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms