RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 OR10G9Q8NGN4 311 aa16.87■□□□□ 0.29
HLA-C-209ENST00000495835 OR10G7Q8NGN6 311 aa16.87■□□□□ 0.29
HLA-C-209ENST00000495835 CMTM2Q8TAZ6 248 aa16.87■□□□□ 0.29
HLA-C-209ENST00000495835 ARPC5LQ9BPX5 153 aa16.87■□□□□ 0.29
HLA-C-209ENST00000495835 KLF12Q9Y4X4 402 aa16.87■□□□□ 0.29
HLA-C-209ENST00000495835 PKHD1P08F94 4074 aa16.86■□□□□ 0.29
HLA-C-209ENST00000495835 TRGV1A0A0A0MS02 117 aa16.86■□□□□ 0.29
HLA-C-209ENST00000495835 NBDYA0A0U1RRE5 68 aa16.86■□□□□ 0.29
HLA-C-209ENST00000495835 Q6AWC8 147 aa16.86■□□□□ 0.29
HLA-C-209ENST00000495835 SSX7Q7RTT5 188 aa16.86■□□□□ 0.29
HLA-C-209ENST00000495835 Q8TAT8 98 aa16.86■□□□□ 0.29
HLA-C-209ENST00000495835 PSMG3Q9BT73 122 aaPredicted RBP16.86■□□□□ 0.29
HLA-C-209ENST00000495835 TMPRSS5Q9H3S3 457 aa16.86■□□□□ 0.29
HLA-C-209ENST00000495835 HERC2O95714 4834 aa16.86■□□□□ 0.29
HLA-C-209ENST00000495835 PGPA6NDG6 321 aa16.85■□□□□ 0.29
HLA-C-209ENST00000495835 GIPP09681 153 aaPredicted RBP16.85■□□□□ 0.29
HLA-C-209ENST00000495835 SERF2P84101 59 aa16.85■□□□□ 0.29
HLA-C-209ENST00000495835 MBP02144 154 aa16.84■□□□□ 0.29
HLA-C-209ENST00000495835 RAB2AP61019 212 aa16.84■□□□□ 0.29
HLA-C-209ENST00000495835 ZNF415Q09FC8 603 aa16.84■□□□□ 0.29
HLA-C-209ENST00000495835 A0A0J9YY99 117 aa16.83■□□□□ 0.28
HLA-C-209ENST00000495835 SLAQ13239 276 aa16.83■□□□□ 0.28
HLA-C-209ENST00000495835 ST6GAL2Q96JF0 529 aa16.83■□□□□ 0.28
HLA-C-209ENST00000495835 HYLS1Q96M11 299 aa16.83■□□□□ 0.28
HLA-C-209ENST00000495835 MUC4Q99102 2169 aa16.83■□□□□ 0.28
HLA-C-209ENST00000495835 UPK3BQ9BT76 320 aa16.83■□□□□ 0.28
HLA-C-209ENST00000495835 TP53TG3Q9ULZ0 132 aa16.83■□□□□ 0.28
HLA-C-209ENST00000495835 STAG3L2P0CL84 134 aa16.82■□□□□ 0.28
HLA-C-209ENST00000495835 STAG3L3P0CL85 134 aa16.82■□□□□ 0.28
HLA-C-209ENST00000495835 CDC34P49427 236 aaPredicted RBP16.82■□□□□ 0.28
HLA-C-209ENST00000495835 Q9H8V8 135 aa16.82■□□□□ 0.28
HLA-C-209ENST00000495835 SERTM2A0A1B0GWG4 89 aa16.81■□□□□ 0.28
HLA-C-209ENST00000495835 FAM159AQ6UWV7 190 aa16.81■□□□□ 0.28
HLA-C-209ENST00000495835 Q6ZQT7 251 aa16.81■□□□□ 0.28
HLA-C-209ENST00000495835 HSD17B11Q8NBQ5 300 aa16.81■□□□□ 0.28
HLA-C-209ENST00000495835 INO80EQ8NBZ0 244 aaPredicted RBP16.81■□□□□ 0.28
HLA-C-209ENST00000495835 SUN5Q8TC36 379 aa16.81■□□□□ 0.28
HLA-C-209ENST00000495835 VSIG2Q96IQ7 327 aa16.81■□□□□ 0.28
HLA-C-209ENST00000495835 SPXQ9BT56 116 aa16.81■□□□□ 0.28
HLA-C-209ENST00000495835 TDRG1Q3Y452 100 aa16.8■□□□□ 0.28
HLA-C-209ENST00000495835 TNFSF18Q9UNG2 199 aa16.8■□□□□ 0.28
HLA-C-209ENST00000495835 TRGV11A0A075B6L2 103 aa16.79■□□□□ 0.28
HLA-C-209ENST00000495835 ATP6V0CP27449 155 aa16.79■□□□□ 0.28
HLA-C-209ENST00000495835 ESRGQ1W209 222 aa16.79■□□□□ 0.28
HLA-C-209ENST00000495835 TTC32Q5I0X7 151 aa16.79■□□□□ 0.28
HLA-C-209ENST00000495835 C6orf223Q8N319 242 aa16.79■□□□□ 0.28
HLA-C-209ENST00000495835 MRPS16Q9Y3D3 137 aaKnown RBP16.79■□□□□ 0.28
HLA-C-209ENST00000495835 KIAA1109Q2LD37 5005 aa16.78■□□□□ 0.28
HLA-C-209ENST00000495835 DYNC1H1Q14204 4646 aaKnown RBP16.78■□□□□ 0.28
HLA-C-209ENST00000495835 EIF3GO75821 320 aaKnown RBP eCLIP16.78■□□□□ 0.28
HLA-C-209ENST00000495835 ARL14EPLP0DKL9 152 aa16.78■□□□□ 0.28
HLA-C-209ENST00000495835 GOLT1AQ6ZVE7 132 aa16.78■□□□□ 0.28
HLA-C-209ENST00000495835 RAB24Q969Q5 203 aa16.78■□□□□ 0.28
HLA-C-209ENST00000495835 PRO0255Q9UI72 69 aa16.78■□□□□ 0.28
HLA-C-209ENST00000495835 DNAH11Q96DT5 4516 aa16.78■□□□□ 0.28
HLA-C-209ENST00000495835 A0A096LPF7 62 aa16.77■□□□□ 0.28
HLA-C-209ENST00000495835 A0A1W2PPQ1 181 aa16.77■□□□□ 0.28
HLA-C-209ENST00000495835 BTF3P20290 206 aaKnown RBP16.77■□□□□ 0.28
HLA-C-209ENST00000495835 MUC21Q5SSG8 566 aa16.77■□□□□ 0.28
HLA-C-209ENST00000495835 TRAV21A0A0B4J279 112 aa16.76■□□□□ 0.27
HLA-C-209ENST00000495835 HMGB3O15347 200 aaKnown RBP16.76■□□□□ 0.27
HLA-C-209ENST00000495835 Q5BKY6 102 aa16.76■□□□□ 0.27
HLA-C-209ENST00000495835 RASL10AQ92737 203 aa16.76■□□□□ 0.27
HLA-C-209ENST00000495835 TMEM167BQ9NRX6 74 aa16.76■□□□□ 0.27
HLA-C-209ENST00000495835 MRPL16Q9NX20 251 aaKnown RBP16.76■□□□□ 0.27
HLA-C-209ENST00000495835 BORCS7-ASMTA0A0B4J1R7 106 aa16.75■□□□□ 0.27
HLA-C-209ENST00000495835 PAX4O43316 350 aa16.75■□□□□ 0.27
HLA-C-209ENST00000495835 IQCF2Q8IXL9 164 aa16.75■□□□□ 0.27
HLA-C-209ENST00000495835 C5orf17Q8NAS9 161 aa16.75■□□□□ 0.27
HLA-C-209ENST00000495835 ACTR3CQ9C0K3 210 aaPredicted RBP16.75■□□□□ 0.27
HLA-C-209ENST00000495835 TREM1Q9NP99 234 aa16.75■□□□□ 0.27
HLA-C-209ENST00000495835 MDFICQ9P1T7 246 aa16.75■□□□□ 0.27
HLA-C-209ENST00000495835 RPH3ALQ9UNE2 315 aa16.75■□□□□ 0.27
HLA-C-209ENST00000495835 K7EQM0 130 aa16.74■□□□□ 0.27
HLA-C-209ENST00000495835 CXorf1O96002 111 aa16.74■□□□□ 0.27
HLA-C-209ENST00000495835 GCHFRP30047 84 aa16.74■□□□□ 0.27
HLA-C-209ENST00000495835 TMEM183BQ1AE95 376 aa16.74■□□□□ 0.27
HLA-C-209ENST00000495835 TMEM183AQ8IXX5 376 aa16.74■□□□□ 0.27
HLA-C-209ENST00000495835 KCNS1Q96KK3 526 aa16.74■□□□□ 0.27
HLA-C-209ENST00000495835 HHLA3Q9XRX5 114 aa16.74■□□□□ 0.27
HLA-C-209ENST00000495835 ICOSQ9Y6W8 199 aa16.74■□□□□ 0.27
HLA-C-209ENST00000495835 RNF222A6NCQ9 220 aa16.73■□□□□ 0.27
HLA-C-209ENST00000495835 MED14OSP0DP75 135 aa16.73■□□□□ 0.27
HLA-C-209ENST00000495835 FHL2Q14192 279 aa16.73■□□□□ 0.27
HLA-C-209ENST00000495835 RGS21Q2M5E4 152 aa16.73■□□□□ 0.27
HLA-C-209ENST00000495835 NDFIP1Q9BT67 221 aa16.73■□□□□ 0.27
HLA-C-209ENST00000495835 FBLL1A6NHQ2 334 aaKnown RBP16.72■□□□□ 0.27
HLA-C-209ENST00000495835 TCRAP04437 139 aa16.72■□□□□ 0.27
HLA-C-209ENST00000495835 CRYBA4P53673 196 aa16.72■□□□□ 0.27
HLA-C-209ENST00000495835 OR2T35Q8NGX2 323 aa16.72■□□□□ 0.27
HLA-C-209ENST00000495835 TVP23CQ96ET8 276 aa16.72■□□□□ 0.27
HLA-C-209ENST00000495835 FXYD6-FXYD2A0A087WZ82 144 aa16.71■□□□□ 0.27
HLA-C-209ENST00000495835 TRAV8-1A0A0A6YYK1 113 aa16.71■□□□□ 0.27
HLA-C-209ENST00000495835 MRPL23Q16540 153 aaKnown RBP16.71■□□□□ 0.27
HLA-C-209ENST00000495835 SH3BGRL3Q9H299 93 aa16.71■□□□□ 0.27
HLA-C-209ENST00000495835 IGHV3-53P01767 116 aa16.7■□□□□ 0.26
HLA-C-209ENST00000495835 GNG5P63218 68 aa16.7■□□□□ 0.26
HLA-C-209ENST00000495835 RPL7L1Q6DKI1 246 aaKnown RBP16.7■□□□□ 0.26
HLA-C-209ENST00000495835 A0A1W2PRE2 83 aa16.69■□□□□ 0.26
HLA-C-209ENST00000495835 TAAR5O14804 337 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms