RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 INSL3P51460 131 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 FXYD7P58549 80 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 KRTAP12-3P60328 96 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 MRPS10P82664 201 aaKnown RBP2.45□□□□□ -2.02
CCDC39-207ENST00000495817 TEX261Q6UWH6 196 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 Q6ZS52 159 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 NUP35Q8NFH5 326 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 OR51A4Q8NGJ6 313 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 OR51T1Q8NGJ9 327 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 SGMS2Q8NHU3 365 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 SLC25A21Q9BQT8 299 aaPredicted RBP2.45□□□□□ -2.02
CCDC39-207ENST00000495817 TXNDC17Q9BRA2 123 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 OR2J1Q9GZK6 312 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 WDR61Q9GZS3 305 aaKnown RBP2.45□□□□□ -2.02
CCDC39-207ENST00000495817 TAAR3PQ9P1P4 343 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 MAP1BP46821 2468 aaKnown RBP2.45□□□□□ -2.02
CCDC39-207ENST00000495817 ZFC3H1O60293 1989 aaKnown RBP2.45□□□□□ -2.02
CCDC39-207ENST00000495817 LAMA5O15230 3695 aa2.45□□□□□ -2.02
CCDC39-207ENST00000495817 CACNA1GO43497 2377 aa2.44□□□□□ -2.02
CCDC39-207ENST00000495817 CELSR3Q9NYQ7 3312 aa2.44□□□□□ -2.02
CCDC39-207ENST00000495817 CHD8Q9HCK8 2581 aa2.44□□□□□ -2.02
CCDC39-207ENST00000495817 TRAV5A0A0B4J249 113 aa2.44□□□□□ -2.02
CCDC39-207ENST00000495817 A0A0D9SFI3 127 aa2.44□□□□□ -2.02
CCDC39-207ENST00000495817 TMEM269A0A1B0GVZ9 245 aa2.44□□□□□ -2.02
CCDC39-207ENST00000495817 CCL25O15444 150 aa2.44□□□□□ -2.02
CCDC39-207ENST00000495817 DPM2O94777 84 aa2.44□□□□□ -2.02
CCDC39-207ENST00000495817 MT-ND4LP03901 98 aa2.44□□□□□ -2.02
CCDC39-207ENST00000495817 FGF7P21781 194 aa2.44□□□□□ -2.02
CCDC39-207ENST00000495817 HBA1P69905 142 aa2.44□□□□□ -2.02
CCDC39-207ENST00000495817 ZNF90Q03938 601 aa2.44□□□□□ -2.02
CCDC39-207ENST00000495817 MIAQ16674 131 aa2.44□□□□□ -2.02
CCDC39-207ENST00000495817 VMA21Q3ZAQ7 101 aa2.44□□□□□ -2.02
CCDC39-207ENST00000495817 Q6Q795 121 aa2.44□□□□□ -2.02
CCDC39-207ENST00000495817 PRR15Q8IV56 129 aa2.44□□□□□ -2.02
CCDC39-207ENST00000495817 C4orf33Q8N1A6 199 aa2.44□□□□□ -2.02
CCDC39-207ENST00000495817 PACRGLQ8N7B6 248 aa2.44□□□□□ -2.02
CCDC39-207ENST00000495817 DCANP1Q8TF63 244 aa2.44□□□□□ -2.02
CCDC39-207ENST00000495817 TMEM106AQ96A25 262 aa2.44□□□□□ -2.02
CCDC39-207ENST00000495817 SLAMF6Q96DU3 332 aa2.44□□□□□ -2.02
CCDC39-207ENST00000495817 GPX7Q96SL4 187 aaPredicted RBP2.44□□□□□ -2.02
CCDC39-207ENST00000495817 TAF9BQ9HBM6 251 aa2.44□□□□□ -2.02
CCDC39-207ENST00000495817 PRO2289Q9P1D8 64 aa2.44□□□□□ -2.02
CCDC39-207ENST00000495817 BAIAP2Q9UQB8 552 aa2.44□□□□□ -2.02
CCDC39-207ENST00000495817 CEP250Q9BV73 2442 aa2.44□□□□□ -2.02
CCDC39-207ENST00000495817 LAMA4Q16363 1823 aa2.44□□□□□ -2.02
CCDC39-207ENST00000495817 OTOGLQ3ZCN5 2332 aa2.43□□□□□ -2.02
CCDC39-207ENST00000495817 NBEAQ8NFP9 2946 aa2.43□□□□□ -2.02
CCDC39-207ENST00000495817 FAM186AA6NE01 2351 aa2.43□□□□□ -2.02
CCDC39-207ENST00000495817 ACACBO00763 2458 aa2.43□□□□□ -2.02
CCDC39-207ENST00000495817 PATJQ8NI35 1801 aa2.43□□□□□ -2.02
CCDC39-207ENST00000495817 MYLKQ15746 1914 aa2.43□□□□□ -2.02
CCDC39-207ENST00000495817 GREB1Q4ZG55 1949 aa2.43□□□□□ -2.02
CCDC39-207ENST00000495817 ITPR1Q14643 2758 aa2.43□□□□□ -2.02
CCDC39-207ENST00000495817 TRAV38-1A0A0B4J264 116 aa2.43□□□□□ -2.02
CCDC39-207ENST00000495817 M0R143 59 aa2.43□□□□□ -2.02
CCDC39-207ENST00000495817 TRGC2P03986 189 aa2.43□□□□□ -2.02
CCDC39-207ENST00000495817 IGLC6P0CF74 106 aa2.43□□□□□ -2.02
CCDC39-207ENST00000495817 COPZ1P61923 177 aa2.43□□□□□ -2.02
CCDC39-207ENST00000495817 CAV1Q03135 178 aa2.43□□□□□ -2.02
CCDC39-207ENST00000495817 EIF3IQ13347 325 aaKnown RBP2.43□□□□□ -2.02
CCDC39-207ENST00000495817 SCGB2B2Q4G0G5 96 aa2.43□□□□□ -2.02
CCDC39-207ENST00000495817 GLT8D1Q68CQ7 371 aa2.43□□□□□ -2.02
CCDC39-207ENST00000495817 TMEM14EPQ6UXP3 125 aa2.43□□□□□ -2.02
CCDC39-207ENST00000495817 C8orf59Q8N0T1 100 aaPredicted RBP2.43□□□□□ -2.02
CCDC39-207ENST00000495817 OR52R1Q8NGF1 315 aa2.43□□□□□ -2.02
CCDC39-207ENST00000495817 PSMG3Q9BT73 122 aaPredicted RBP2.43□□□□□ -2.02
CCDC39-207ENST00000495817 RTL8AQ9BWD3 113 aa2.43□□□□□ -2.02
CCDC39-207ENST00000495817 TTTY13Q9BZ97 58 aa2.43□□□□□ -2.02
CCDC39-207ENST00000495817 OTORQ9NRC9 128 aa2.43□□□□□ -2.02
CCDC39-207ENST00000495817 ZFYVE26Q68DK2 2539 aa2.43□□□□□ -2.02
CCDC39-207ENST00000495817 RIF1Q5UIP0 2472 aaKnown RBP2.43□□□□□ -2.02
CCDC39-207ENST00000495817 LAMA1P25391 3075 aa2.43□□□□□ -2.02
CCDC39-207ENST00000495817 HELZP42694 1942 aaKnown RBP2.42□□□□□ -2.02
CCDC39-207ENST00000495817 TRBV20OR9-2A0A075B6H5 130 aa2.42□□□□□ -2.02
CCDC39-207ENST00000495817 ODAMA1E959 279 aa2.42□□□□□ -2.02
CCDC39-207ENST00000495817 TMEM212A6NML5 194 aa2.42□□□□□ -2.02
CCDC39-207ENST00000495817 ZNF670-ZNF695F2Z2N8 137 aa2.42□□□□□ -2.02
CCDC39-207ENST00000495817 H3BRN7 92 aa2.42□□□□□ -2.02
CCDC39-207ENST00000495817 PLA2G10O15496 165 aa2.42□□□□□ -2.02
CCDC39-207ENST00000495817 IGKV1-5P01602 117 aa2.42□□□□□ -2.02
CCDC39-207ENST00000495817 HINT1P49773 126 aaPredicted RBP2.42□□□□□ -2.02
CCDC39-207ENST00000495817 KRTAP12-4P60329 112 aa2.42□□□□□ -2.02
CCDC39-207ENST00000495817 AKR1C1Q04828 323 aa2.42□□□□□ -2.02
CCDC39-207ENST00000495817 HES1Q14469 280 aa2.42□□□□□ -2.02
CCDC39-207ENST00000495817 RTL8BQ17RB0 113 aa2.42□□□□□ -2.02
CCDC39-207ENST00000495817 SLC35E3Q7Z769 313 aa2.42□□□□□ -2.02
CCDC39-207ENST00000495817 CROCCP2Q86T23 111 aa2.42□□□□□ -2.02
CCDC39-207ENST00000495817 CTAGE3PQ8IX95 158 aa2.42□□□□□ -2.02
CCDC39-207ENST00000495817 IFT20Q8IY31 132 aa2.42□□□□□ -2.02
CCDC39-207ENST00000495817 C9orf62Q8N4C0 152 aa2.42□□□□□ -2.02
CCDC39-207ENST00000495817 TCTEX1D1Q8N7M0 179 aa2.42□□□□□ -2.02
CCDC39-207ENST00000495817 OR5H6Q8NGV6 325 aa2.42□□□□□ -2.02
CCDC39-207ENST00000495817 TERB2Q8NHR7 220 aa2.42□□□□□ -2.02
CCDC39-207ENST00000495817 AP1S3Q96PC3 154 aa2.42□□□□□ -2.02
CCDC39-207ENST00000495817 SNHG12Q9BXW3 62 aa2.42□□□□□ -2.02
CCDC39-207ENST00000495817 XAGE1AQ9HD64 81 aa2.42□□□□□ -2.02
CCDC39-207ENST00000495817 SCN3BQ9NY72 215 aa2.42□□□□□ -2.02
CCDC39-207ENST00000495817 BOKQ9UMX3 212 aaPredicted RBP2.42□□□□□ -2.02
CCDC39-207ENST00000495817 HHLA3Q9XRX5 114 aa2.42□□□□□ -2.02
CCDC39-207ENST00000495817 AKAP13Q12802 2813 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms