RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 KLK15Q9H2R5 256 aa7.84□□□□□ -1.15
LINC00488-201ENST00000494582 GAGE2DQ9UEU5 116 aa7.84□□□□□ -1.15
LINC00488-201ENST00000494582 ZGRF1Q86YA3 2104 aa7.84□□□□□ -1.15
LINC00488-201ENST00000494582 CRYGBP07316 175 aa7.84□□□□□ -1.15
LINC00488-201ENST00000494582 CD40P25942 277 aa7.84□□□□□ -1.15
LINC00488-201ENST00000494582 C3orf36Q3SXR2 165 aa7.84□□□□□ -1.15
LINC00488-201ENST00000494582 C3orf56Q8N813 242 aa7.84□□□□□ -1.15
LINC00488-201ENST00000494582 ZNF815PA8K554 130 aa7.83□□□□□ -1.16
LINC00488-201ENST00000494582 H7C1H1 209 aa7.83□□□□□ -1.16
LINC00488-201ENST00000494582 CFIP05156 583 aa7.83□□□□□ -1.16
LINC00488-201ENST00000494582 COX6B1P14854 86 aa7.83□□□□□ -1.16
LINC00488-201ENST00000494582 SLC25A16P16260 332 aa7.83□□□□□ -1.16
LINC00488-201ENST00000494582 LINC01559Q495D7 138 aa7.83□□□□□ -1.16
LINC00488-201ENST00000494582 OR11H6Q8NGC7 330 aa7.83□□□□□ -1.16
LINC00488-201ENST00000494582 RNF125Q96EQ8 232 aa7.83□□□□□ -1.16
LINC00488-201ENST00000494582 VKORC1Q9BQB6 163 aa7.83□□□□□ -1.16
LINC00488-201ENST00000494582 MALRD1Q5VYJ5 2156 aa7.83□□□□□ -1.16
LINC00488-201ENST00000494582 K7EIM0 57 aa7.83□□□□□ -1.16
LINC00488-201ENST00000494582 IGHV1-46P01743 117 aa7.83□□□□□ -1.16
LINC00488-201ENST00000494582 C1orf122Q6ZSJ8 110 aa7.83□□□□□ -1.16
LINC00488-201ENST00000494582 TRPT1Q86TN4 253 aaKnown RBP7.83□□□□□ -1.16
LINC00488-201ENST00000494582 RASL10AQ92737 203 aa7.83□□□□□ -1.16
LINC00488-201ENST00000494582 C11orf21Q9P2W6 132 aa7.83□□□□□ -1.16
LINC00488-201ENST00000494582 RAXQ9Y2V3 346 aa7.83□□□□□ -1.16
LINC00488-201ENST00000494582 MUC3AQ02505 3323 aa7.83□□□□□ -1.16
LINC00488-201ENST00000494582 COL27A1Q8IZC6 1860 aaPredicted RBP7.82□□□□□ -1.16
LINC00488-201ENST00000494582 EIF4EBP3O60516 100 aaPredicted RBP7.82□□□□□ -1.16
LINC00488-201ENST00000494582 CFC1BP0CG36 223 aa7.82□□□□□ -1.16
LINC00488-201ENST00000494582 CFC1P0CG37 223 aa7.82□□□□□ -1.16
LINC00488-201ENST00000494582 GATA4P43694 442 aa7.82□□□□□ -1.16
LINC00488-201ENST00000494582 SRSF9Q13242 221 aaKnown RBP eCLIP7.82□□□□□ -1.16
LINC00488-201ENST00000494582 Q6ZS46 218 aa7.82□□□□□ -1.16
LINC00488-201ENST00000494582 SIGLEC9Q9Y336 463 aa7.82□□□□□ -1.16
LINC00488-201ENST00000494582 ROS1P08922 2347 aa7.82□□□□□ -1.16
LINC00488-201ENST00000494582 TRAV8-2A0A0B4J237 113 aa7.82□□□□□ -1.16
LINC00488-201ENST00000494582 M0R1B8 84 aa7.82□□□□□ -1.16
LINC00488-201ENST00000494582 IFITM1P13164 125 aa7.82□□□□□ -1.16
LINC00488-201ENST00000494582 ID1P41134 155 aa7.82□□□□□ -1.16
LINC00488-201ENST00000494582 TNFAIP6P98066 277 aaPredicted RBP7.82□□□□□ -1.16
LINC00488-201ENST00000494582 ERCC8Q13216 396 aa7.82□□□□□ -1.16
LINC00488-201ENST00000494582 TMEM30BQ3MIR4 351 aa7.82□□□□□ -1.16
LINC00488-201ENST00000494582 ATP1A1-AS1Q5TC04 95 aa7.82□□□□□ -1.16
LINC00488-201ENST00000494582 CFHR4Q92496 578 aa7.82□□□□□ -1.16
LINC00488-201ENST00000494582 ODF3Q96PU9 254 aa7.82□□□□□ -1.16
LINC00488-201ENST00000494582 AAMDCQ9H7C9 122 aa7.82□□□□□ -1.16
LINC00488-201ENST00000494582 SLC25A15Q9Y619 301 aa7.82□□□□□ -1.16
LINC00488-201ENST00000494582 CACNA1GO43497 2377 aa7.82□□□□□ -1.16
LINC00488-201ENST00000494582 CENPVL3A0A0U1RRI6 287 aa7.81□□□□□ -1.16
LINC00488-201ENST00000494582 A0A1W2PNU3 283 aaPredicted RBP7.81□□□□□ -1.16
LINC00488-201ENST00000494582 TMEM262E9PQX1 116 aa7.81□□□□□ -1.16
LINC00488-201ENST00000494582 SCGB1D4Q6XE38 83 aa7.81□□□□□ -1.16
LINC00488-201ENST00000494582 PPP1R27Q86WC6 154 aa7.81□□□□□ -1.16
LINC00488-201ENST00000494582 NEXN-AS1Q8NBZ9 246 aa7.81□□□□□ -1.16
LINC00488-201ENST00000494582 C1orf162Q8NEQ5 155 aaPredicted RBP7.81□□□□□ -1.16
LINC00488-201ENST00000494582 VCX2Q9H322 139 aa7.81□□□□□ -1.16
LINC00488-201ENST00000494582 PPDPFQ9H3Y8 114 aa7.81□□□□□ -1.16
LINC00488-201ENST00000494582 TRAV12-1A0A0B4J245 112 aa7.81□□□□□ -1.16
LINC00488-201ENST00000494582 PRAC2D3DTV9 90 aa7.81□□□□□ -1.16
LINC00488-201ENST00000494582 SLC25A20O43772 301 aa7.81□□□□□ -1.16
LINC00488-201ENST00000494582 SNCGO76070 127 aa7.81□□□□□ -1.16
LINC00488-201ENST00000494582 ELANEP08246 267 aa7.81□□□□□ -1.16
LINC00488-201ENST00000494582 RAX2Q96IS3 184 aa7.81□□□□□ -1.16
LINC00488-201ENST00000494582 IGKV3D-20A0A0C4DH25 116 aa7.8□□□□□ -1.16
LINC00488-201ENST00000494582 C9JAW5 83 aa7.8□□□□□ -1.16
LINC00488-201ENST00000494582 TTC32Q5I0X7 151 aa7.8□□□□□ -1.16
LINC00488-201ENST00000494582 CXCL12P48061 93 aa7.8□□□□□ -1.16
LINC00488-201ENST00000494582 TEX36Q5VZQ5 186 aa7.8□□□□□ -1.16
LINC00488-201ENST00000494582 LYPD2Q6UXB3 125 aa7.8□□□□□ -1.16
LINC00488-201ENST00000494582 TDHQ8IZJ6 230 aa7.8□□□□□ -1.16
LINC00488-201ENST00000494582 PRSS33Q8NF86 280 aa7.8□□□□□ -1.16
LINC00488-201ENST00000494582 ONECUT1Q9UBC0 465 aa7.8□□□□□ -1.16
LINC00488-201ENST00000494582 VPREB3Q9UKI3 123 aa7.8□□□□□ -1.16
LINC00488-201ENST00000494582 SMAD5-AS1Q9Y6J3 95 aa7.8□□□□□ -1.16
LINC00488-201ENST00000494582 IGLV3-9A0A075B6K5 115 aa7.79□□□□□ -1.16
LINC00488-201ENST00000494582 A0A0J9YY99 117 aa7.79□□□□□ -1.16
LINC00488-201ENST00000494582 CCL8P80075 99 aa7.79□□□□□ -1.16
LINC00488-201ENST00000494582 PDE6HQ13956 83 aa7.79□□□□□ -1.16
LINC00488-201ENST00000494582 ZNF672Q499Z4 452 aaPredicted RBP7.79□□□□□ -1.16
LINC00488-201ENST00000494582 DYNAPQ8N1N2 210 aa7.79□□□□□ -1.16
LINC00488-201ENST00000494582 Q8N1Y9 231 aa7.79□□□□□ -1.16
LINC00488-201ENST00000494582 SPRY2O43597 315 aa7.79□□□□□ -1.16
LINC00488-201ENST00000494582 CLEC3BP05452 202 aa7.79□□□□□ -1.16
LINC00488-201ENST00000494582 TSPEAR-AS2P59090 65 aa7.79□□□□□ -1.16
LINC00488-201ENST00000494582 PLGLAQ15195 96 aa7.79□□□□□ -1.16
LINC00488-201ENST00000494582 C22orf34Q6ZV56 151 aa7.79□□□□□ -1.16
LINC00488-201ENST00000494582 IL17RELQ6ZVW7 336 aa7.79□□□□□ -1.16
LINC00488-201ENST00000494582 LINC00311Q8N616 119 aa7.79□□□□□ -1.16
LINC00488-201ENST00000494582 NTN5Q8WTR8 489 aaPredicted RBP7.79□□□□□ -1.16
LINC00488-201ENST00000494582 IGFBPL1Q8WX77 278 aa7.79□□□□□ -1.16
LINC00488-201ENST00000494582 BAALCQ8WXS3 180 aa7.79□□□□□ -1.16
LINC00488-201ENST00000494582 SCGB3A1Q96QR1 104 aa7.79□□□□□ -1.16
LINC00488-201ENST00000494582 IGHV3OR16-8A0A075B7F1 116 aa7.78□□□□□ -1.16
LINC00488-201ENST00000494582 TEX49A0A1B0GTD5 131 aa7.78□□□□□ -1.16
LINC00488-201ENST00000494582 IGHV3-30P01768 117 aa7.78□□□□□ -1.16
LINC00488-201ENST00000494582 SCGB1C2P0DMR2 95 aa7.78□□□□□ -1.16
LINC00488-201ENST00000494582 IGHV3-30-5P0DP03 117 aa7.78□□□□□ -1.16
LINC00488-201ENST00000494582 GLRXP35754 106 aa7.78□□□□□ -1.16
LINC00488-201ENST00000494582 EMP1P54849 157 aa7.78□□□□□ -1.16
LINC00488-201ENST00000494582 DLX6P56179 175 aa7.78□□□□□ -1.16
LINC00488-201ENST00000494582 MEIG1Q5JSS6 88 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms