RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 OR8A1Q8NGG7 326 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 FRZBQ92765 325 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 HIST1H2BHQ93079 126 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 C8orf49Q96NF6 230 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 CLUHP3Q96NS8 147 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 NEU1Q99519 415 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 HIST1H2BNQ99877 126 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 HIST1H2BMQ99879 126 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 ASCL2Q99929 193 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 CNFNQ9BYD5 112 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 RPH3ALQ9UNE2 315 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 TMA7Q9Y2S6 64 aaKnown RBP5.08□□□□□ -1.6
MSH5-217ENST00000494458 A0A0J9YX75 114 aa5.07□□□□□ -1.6
MSH5-217ENST00000494458 HIGD1CA8MV81 97 aa5.07□□□□□ -1.6
MSH5-217ENST00000494458 KLLNB2CW77 178 aa5.07□□□□□ -1.6
MSH5-217ENST00000494458 SH2D1AO60880 128 aa5.07□□□□□ -1.6
MSH5-217ENST00000494458 CA1P00915 261 aaPredicted RBP5.07□□□□□ -1.6
MSH5-217ENST00000494458 IGLC6P0CF74 106 aa5.07□□□□□ -1.6
MSH5-217ENST00000494458 HIST1H1AQ02539 215 aaPredicted RBP5.07□□□□□ -1.6
MSH5-217ENST00000494458 DNLZQ5SXM8 178 aa5.07□□□□□ -1.6
MSH5-217ENST00000494458 TMEM78Q5T7P6 136 aa5.07□□□□□ -1.6
MSH5-217ENST00000494458 Q6AWC8 147 aa5.07□□□□□ -1.6
MSH5-217ENST00000494458 WDR73Q6P4I2 378 aa5.07□□□□□ -1.6
MSH5-217ENST00000494458 TMEM136Q6ZRR5 245 aa5.07□□□□□ -1.6
MSH5-217ENST00000494458 RBPMS2Q6ZRY4 209 aaKnown RBP5.07□□□□□ -1.6
MSH5-217ENST00000494458 NDUFA11Q86Y39 141 aa5.07□□□□□ -1.6
MSH5-217ENST00000494458 DPF1Q92782 380 aa5.07□□□□□ -1.6
MSH5-217ENST00000494458 DAZAP1Q96EP5 407 aaKnown RBP5.07□□□□□ -1.6
MSH5-217ENST00000494458 SSBP4Q9BWG4 385 aaPredicted RBP5.07□□□□□ -1.6
MSH5-217ENST00000494458 ZNF256Q9Y2P7 627 aaPredicted RBP5.07□□□□□ -1.6
MSH5-217ENST00000494458 SETXQ7Z333 2677 aaKnown RBP5.07□□□□□ -1.6
MSH5-217ENST00000494458 IGHV4-4A0A075B6R2 117 aa5.06□□□□□ -1.6
MSH5-217ENST00000494458 IGKV3D-20A0A0C4DH25 116 aa5.06□□□□□ -1.6
MSH5-217ENST00000494458 UBE2CO00762 179 aa5.06□□□□□ -1.6
MSH5-217ENST00000494458 MT-ND6P03923 174 aa5.06□□□□□ -1.6
MSH5-217ENST00000494458 TRGC1P0CF51 173 aa5.06□□□□□ -1.6
MSH5-217ENST00000494458 HOXA5P20719 270 aa5.06□□□□□ -1.6
MSH5-217ENST00000494458 CTRLP40313 264 aa5.06□□□□□ -1.6
MSH5-217ENST00000494458 RPS20P60866 119 aaKnown RBP5.06□□□□□ -1.6
MSH5-217ENST00000494458 RPL19P84098 196 aaKnown RBP5.06□□□□□ -1.6
MSH5-217ENST00000494458 GDF5OSQ5U4N7 250 aa5.06□□□□□ -1.6
MSH5-217ENST00000494458 PRR27Q6MZM9 219 aa5.06□□□□□ -1.6
MSH5-217ENST00000494458 AMTNQ6UX39 209 aa5.06□□□□□ -1.6
MSH5-217ENST00000494458 ZNF493Q6ZR52 646 aa5.06□□□□□ -1.6
MSH5-217ENST00000494458 OR2D3Q8NGH3 330 aa5.06□□□□□ -1.6
MSH5-217ENST00000494458 Q8TAT8 98 aa5.06□□□□□ -1.6
MSH5-217ENST00000494458 SPAG8Q99932 426 aaPredicted RBP5.06□□□□□ -1.6
MSH5-217ENST00000494458 FAM110AQ9BQ89 295 aa5.06□□□□□ -1.6
MSH5-217ENST00000494458 NDFIP1Q9BT67 221 aa5.06□□□□□ -1.6
MSH5-217ENST00000494458 C11orf21Q9P2W6 132 aa5.06□□□□□ -1.6
MSH5-217ENST00000494458 C2CD3Q4AC94 2353 aa5.05□□□□□ -1.6
MSH5-217ENST00000494458 A0A1B0GW15 77 aa5.05□□□□□ -1.6
MSH5-217ENST00000494458 CYSRT1A8MQ03 144 aa5.05□□□□□ -1.6
MSH5-217ENST00000494458 M0QZ24 198 aa5.05□□□□□ -1.6
MSH5-217ENST00000494458 ZNF324O75467 553 aaPredicted RBP5.05□□□□□ -1.6
MSH5-217ENST00000494458 HLA-DQA1P01909 254 aa5.05□□□□□ -1.6
MSH5-217ENST00000494458 SNRPD3P62318 126 aaKnown RBP5.05□□□□□ -1.6
MSH5-217ENST00000494458 PAFAH1B2P68402 229 aa5.05□□□□□ -1.6
MSH5-217ENST00000494458 FABP9Q0Z7S8 132 aa5.05□□□□□ -1.6
MSH5-217ENST00000494458 TDRG1Q3Y452 100 aa5.05□□□□□ -1.6
MSH5-217ENST00000494458 PRR9Q5T870 116 aa5.05□□□□□ -1.6
MSH5-217ENST00000494458 FOXI2Q6ZQN5 318 aa5.05□□□□□ -1.6
MSH5-217ENST00000494458 TMEM61Q8N0U2 210 aa5.05□□□□□ -1.6
MSH5-217ENST00000494458 ZNF738Q8NE65 137 aa5.05□□□□□ -1.6
MSH5-217ENST00000494458 OR2K2Q8NGT1 345 aa5.05□□□□□ -1.6
MSH5-217ENST00000494458 OR10J6PQ8NGY7 276 aa5.05□□□□□ -1.6
MSH5-217ENST00000494458 DUX3Q96PT4 197 aa5.05□□□□□ -1.6
MSH5-217ENST00000494458 CITED1Q99966 193 aa5.05□□□□□ -1.6
MSH5-217ENST00000494458 XKRY2A2RUG3 117 aa5.04□□□□□ -1.6
MSH5-217ENST00000494458 TMEM189A5PLL7 270 aa5.04□□□□□ -1.6
MSH5-217ENST00000494458 SNAI2O43623 268 aa5.04□□□□□ -1.6
MSH5-217ENST00000494458 IGLV1-51P01701 117 aa5.04□□□□□ -1.6
MSH5-217ENST00000494458 MED14OSP0DP75 135 aa5.04□□□□□ -1.6
MSH5-217ENST00000494458 PRB4P10163 310 aaPredicted RBP5.04□□□□□ -1.6
MSH5-217ENST00000494458 ESDP10768 282 aa5.04□□□□□ -1.6
MSH5-217ENST00000494458 RPL11P62913 178 aaKnown RBP5.04□□□□□ -1.6
MSH5-217ENST00000494458 Q0VG73 95 aa5.04□□□□□ -1.6
MSH5-217ENST00000494458 SCRT2Q9NQ03 307 aa5.04□□□□□ -1.6
MSH5-217ENST00000494458 TP53TG3Q9ULZ0 132 aa5.04□□□□□ -1.6
MSH5-217ENST00000494458 TRAPPC1Q9Y5R8 145 aa5.04□□□□□ -1.6
MSH5-217ENST00000494458 BAHCC1Q9P281 2608 aa5.04□□□□□ -1.6
MSH5-217ENST00000494458 F8P00451 2351 aa5.04□□□□□ -1.6
MSH5-217ENST00000494458 TRAV21A0A0B4J279 112 aa5.03□□□□□ -1.6
MSH5-217ENST00000494458 A0A1B0GUT8 65 aa5.03□□□□□ -1.6
MSH5-217ENST00000494458 IFITM10A6NMD0 228 aa5.03□□□□□ -1.6
MSH5-217ENST00000494458 F2Z2F3 143 aa5.03□□□□□ -1.6
MSH5-217ENST00000494458 F6UB75 175 aa5.03□□□□□ -1.6
MSH5-217ENST00000494458 H3BMM0 161 aa5.03□□□□□ -1.6
MSH5-217ENST00000494458 DUSP14O95147 198 aaKnown RBP5.03□□□□□ -1.6
MSH5-217ENST00000494458 OR5AL1P0C617 328 aa5.03□□□□□ -1.6
MSH5-217ENST00000494458 ZNF705DP0CH99 300 aaPredicted RBP5.03□□□□□ -1.6
MSH5-217ENST00000494458 ZNF705BP0CI00 300 aaPredicted RBP5.03□□□□□ -1.6
MSH5-217ENST00000494458 GZMBP10144 247 aa5.03□□□□□ -1.6
MSH5-217ENST00000494458 HLA-DRB4P13762 266 aa5.03□□□□□ -1.6
MSH5-217ENST00000494458 TCL1AP56279 114 aa5.03□□□□□ -1.6
MSH5-217ENST00000494458 DEFB1P60022 68 aa5.03□□□□□ -1.6
MSH5-217ENST00000494458 SNRPEP62304 92 aaKnown RBP5.03□□□□□ -1.6
MSH5-217ENST00000494458 HBBP68871 147 aa5.03□□□□□ -1.6
MSH5-217ENST00000494458 BEAN1Q3B7T3 259 aa5.03□□□□□ -1.6
MSH5-217ENST00000494458 CD300EQ496F6 205 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms