RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 C2CD4CQ8TF44 421 aa16.66■□□□□ 0.26
CLIC3-203ENST00000494426 LINC00467Q9BRT7 94 aa16.66■□□□□ 0.26
CLIC3-203ENST00000494426 DEFB131BA0A096LNP1 70 aa16.65■□□□□ 0.26
CLIC3-203ENST00000494426 SERTM2A0A1B0GWG4 89 aa16.65■□□□□ 0.26
CLIC3-203ENST00000494426 LYRM9A8MSI8 78 aa16.65■□□□□ 0.26
CLIC3-203ENST00000494426 DPPA3Q6W0C5 159 aa16.65■□□□□ 0.26
CLIC3-203ENST00000494426 CCDC28AQ8IWP9 274 aa16.65■□□□□ 0.26
CLIC3-203ENST00000494426 LYSTQ99698 3801 aa16.65■□□□□ 0.26
CLIC3-203ENST00000494426 IGLV2-11P01706 119 aa16.64■□□□□ 0.25
CLIC3-203ENST00000494426 SFT2D1Q8WV19 159 aa16.64■□□□□ 0.25
CLIC3-203ENST00000494426 TIMM8BQ9Y5J9 83 aaPredicted RBP16.64■□□□□ 0.25
CLIC3-203ENST00000494426 ZFP69Q49AA0 526 aa16.63■□□□□ 0.25
CLIC3-203ENST00000494426 Q6AWC8 147 aa16.63■□□□□ 0.25
CLIC3-203ENST00000494426 SLC51BQ86UW2 128 aa16.63■□□□□ 0.25
CLIC3-203ENST00000494426 NOP10Q9NPE3 64 aaKnown RBP16.63■□□□□ 0.25
CLIC3-203ENST00000494426 IGLL5B9A064 214 aa16.62■□□□□ 0.25
CLIC3-203ENST00000494426 DAD1P61803 113 aa16.62■□□□□ 0.25
CLIC3-203ENST00000494426 ANXA2RQ3ZCQ2 193 aa16.62■□□□□ 0.25
CLIC3-203ENST00000494426 EIF4E3Q8N5X7 224 aaKnown RBP16.62■□□□□ 0.25
CLIC3-203ENST00000494426 CYB561D1Q8N8Q1 229 aa16.62■□□□□ 0.25
CLIC3-203ENST00000494426 ATG101Q9BSB4 218 aa16.62■□□□□ 0.25
CLIC3-203ENST00000494426 TP53TG3Q9ULZ0 132 aa16.62■□□□□ 0.25
CLIC3-203ENST00000494426 PSG8Q9UQ74 426 aa16.62■□□□□ 0.25
CLIC3-203ENST00000494426 IGHV1OR15-1A0A075B7D0 117 aa16.61■□□□□ 0.25
CLIC3-203ENST00000494426 C11orf72Q8NBR9 251 aa16.61■□□□□ 0.25
CLIC3-203ENST00000494426 LINC00479Q96M42 142 aa16.61■□□□□ 0.25
CLIC3-203ENST00000494426 NKX6-2Q9C056 277 aaPredicted RBP16.61■□□□□ 0.25
CLIC3-203ENST00000494426 TREM1Q9NP99 234 aa16.61■□□□□ 0.25
CLIC3-203ENST00000494426 APLNQ9ULZ1 77 aa16.61■□□□□ 0.25
CLIC3-203ENST00000494426 A0A1B0GV50 99 aa16.6■□□□□ 0.25
CLIC3-203ENST00000494426 CBY3A6NI87 242 aa16.6■□□□□ 0.25
CLIC3-203ENST00000494426 F6UZH7 168 aa16.6■□□□□ 0.25
CLIC3-203ENST00000494426 K7EQM0 130 aa16.6■□□□□ 0.25
CLIC3-203ENST00000494426 RGS13O14921 159 aa16.6■□□□□ 0.25
CLIC3-203ENST00000494426 H2AFB1P0C5Y9 115 aa16.6■□□□□ 0.25
CLIC3-203ENST00000494426 DEFB130BP0DP73 79 aa16.6■□□□□ 0.25
CLIC3-203ENST00000494426 DEFB130AP0DP74 79 aa16.6■□□□□ 0.25
CLIC3-203ENST00000494426 TMEM75Q8N9X5 138 aa16.6■□□□□ 0.25
CLIC3-203ENST00000494426 IFNA7P01567 189 aa16.59■□□□□ 0.25
CLIC3-203ENST00000494426 SULT1A2P50226 295 aa16.59■□□□□ 0.25
CLIC3-203ENST00000494426 FLI1Q01543 452 aaPredicted RBP16.59■□□□□ 0.25
CLIC3-203ENST00000494426 EIF5AL1Q6IS14 154 aaKnown RBP16.59■□□□□ 0.25
CLIC3-203ENST00000494426 LINC00612Q8N6U2 182 aa16.59■□□□□ 0.25
CLIC3-203ENST00000494426 C8orf49Q96NF6 230 aa16.59■□□□□ 0.25
CLIC3-203ENST00000494426 GSN-AS1Q9NRJ2 163 aa16.59■□□□□ 0.25
CLIC3-203ENST00000494426 RYR2Q92736 4967 aa16.59■□□□□ 0.25
CLIC3-203ENST00000494426 IGHV4-4A0A075B6R2 117 aa16.58■□□□□ 0.24
CLIC3-203ENST00000494426 TRAV34A0A0B4J273 112 aa16.58■□□□□ 0.24
CLIC3-203ENST00000494426 PEX7O00628 323 aa16.58■□□□□ 0.24
CLIC3-203ENST00000494426 PAGE4O60829 102 aa16.58■□□□□ 0.24
CLIC3-203ENST00000494426 RAB5CP51148 216 aa16.58■□□□□ 0.24
CLIC3-203ENST00000494426 MUC21Q5SSG8 566 aa16.58■□□□□ 0.24
CLIC3-203ENST00000494426 LINC00476Q8WZB0 136 aa16.58■□□□□ 0.24
CLIC3-203ENST00000494426 SNURFLB1AK76 121 aa16.57■□□□□ 0.24
CLIC3-203ENST00000494426 ATP5G3P48201 142 aa16.57■□□□□ 0.24
CLIC3-203ENST00000494426 TCTAP57738 103 aa16.57■□□□□ 0.24
CLIC3-203ENST00000494426 CCL20P78556 96 aa16.57■□□□□ 0.24
CLIC3-203ENST00000494426 DAZ2Q13117 558 aaKnown RBP16.57■□□□□ 0.24
CLIC3-203ENST00000494426 CST9LP1Q5W188 147 aa16.57■□□□□ 0.24
CLIC3-203ENST00000494426 PRNTQ86SH4 94 aa16.57■□□□□ 0.24
CLIC3-203ENST00000494426 ZNF680Q8NEM1 530 aa16.57■□□□□ 0.24
CLIC3-203ENST00000494426 ARL2-SNX15V9GYD0 113 aa16.57■□□□□ 0.24
CLIC3-203ENST00000494426 ALMS1Q8TCU4 4167 aa16.56■□□□□ 0.24
CLIC3-203ENST00000494426 HTN3P15516 51 aa16.56■□□□□ 0.24
CLIC3-203ENST00000494426 ZNF80P51504 273 aaPredicted RBP16.56■□□□□ 0.24
CLIC3-203ENST00000494426 NKX2-5P52952 324 aaPredicted RBP16.56■□□□□ 0.24
CLIC3-203ENST00000494426 HIST1H2BAQ96A08 127 aa16.56■□□□□ 0.24
CLIC3-203ENST00000494426 KLF12Q9Y4X4 402 aa16.56■□□□□ 0.24
CLIC3-203ENST00000494426 DNAH1Q9P2D7 4330 aa16.56■□□□□ 0.24
CLIC3-203ENST00000494426 FBLL1A6NHQ2 334 aaKnown RBP16.55■□□□□ 0.24
CLIC3-203ENST00000494426 IBA57Q5T440 356 aaKnown RBP16.55■□□□□ 0.24
CLIC3-203ENST00000494426 NDFIP1Q9BT67 221 aa16.55■□□□□ 0.24
CLIC3-203ENST00000494426 TRAV1-1A0A0B4J248 108 aa16.54■□□□□ 0.24
CLIC3-203ENST00000494426 TRAV21A0A0B4J279 112 aa16.54■□□□□ 0.24
CLIC3-203ENST00000494426 TCL1AP56279 114 aa16.54■□□□□ 0.24
CLIC3-203ENST00000494426 TDRG1Q3Y452 100 aa16.53■□□□□ 0.24
CLIC3-203ENST00000494426 Q6ZTI0 123 aa16.53■□□□□ 0.24
CLIC3-203ENST00000494426 GAGE12BA1L429 117 aa16.52■□□□□ 0.24
CLIC3-203ENST00000494426 GAGE7O76087 117 aa16.52■□□□□ 0.24
CLIC3-203ENST00000494426 LY6G6CO95867 125 aa16.52■□□□□ 0.24
CLIC3-203ENST00000494426 GAGE12FP0CL80 117 aa16.52■□□□□ 0.24
CLIC3-203ENST00000494426 GAGE12GP0CL81 117 aa16.52■□□□□ 0.24
CLIC3-203ENST00000494426 GAGE12IP0CL82 117 aa16.52■□□□□ 0.24
CLIC3-203ENST00000494426 SAPCD1Q5SSQ6 148 aa16.52■□□□□ 0.24
CLIC3-203ENST00000494426 FAM159AQ6UWV7 190 aa16.52■□□□□ 0.24
CLIC3-203ENST00000494426 Q86TA4 180 aa16.52■□□□□ 0.24
CLIC3-203ENST00000494426 TCEAL7Q9BRU2 100 aa16.52■□□□□ 0.24
CLIC3-203ENST00000494426 MDFICQ9P1T7 246 aa16.52■□□□□ 0.24
CLIC3-203ENST00000494426 BOLA1Q9Y3E2 137 aa16.52■□□□□ 0.24
CLIC3-203ENST00000494426 HYDINQ4G0P3 5121 aa16.52■□□□□ 0.23
CLIC3-203ENST00000494426 GNRH2O43555 120 aa16.51■□□□□ 0.23
CLIC3-203ENST00000494426 SPINK4O60575 86 aa16.51■□□□□ 0.23
CLIC3-203ENST00000494426 GCGP01275 180 aa16.51■□□□□ 0.23
CLIC3-203ENST00000494426 ATP5G1P05496 136 aa16.51■□□□□ 0.23
CLIC3-203ENST00000494426 PPT1P50897 306 aa16.51■□□□□ 0.23
CLIC3-203ENST00000494426 TMEM183BQ1AE95 376 aa16.51■□□□□ 0.23
CLIC3-203ENST00000494426 SMUG1Q53HV7 270 aa16.51■□□□□ 0.23
CLIC3-203ENST00000494426 TMEM183AQ8IXX5 376 aa16.51■□□□□ 0.23
CLIC3-203ENST00000494426 C11orf21Q9P2W6 132 aa16.51■□□□□ 0.23
CLIC3-203ENST00000494426 NAGKQ9UJ70 344 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms