RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 TMEM144Q7Z5S9 345 aa3.52□□□□□ -1.85
PTCD3-219ENST00000494323 KRTAP7-1Q8IUC3 87 aa3.52□□□□□ -1.85
PTCD3-219ENST00000494323 CLVS1Q8IUQ0 354 aaPredicted RBP3.52□□□□□ -1.85
PTCD3-219ENST00000494323 ZNF738Q8NE65 137 aa3.52□□□□□ -1.85
PTCD3-219ENST00000494323 MIXL1Q9H2W2 232 aa3.52□□□□□ -1.85
PTCD3-219ENST00000494323 SHPKQ9UHJ6 478 aa3.52□□□□□ -1.85
PTCD3-219ENST00000494323 TIMM8BQ9Y5J9 83 aaPredicted RBP3.52□□□□□ -1.85
PTCD3-219ENST00000494323 IGHV3-16A0A0C4DH30 117 aa3.51□□□□□ -1.85
PTCD3-219ENST00000494323 BOLA2-SMG1P6H3BVE0 249 aa3.51□□□□□ -1.85
PTCD3-219ENST00000494323 WRBO00258 174 aa3.51□□□□□ -1.85
PTCD3-219ENST00000494323 OR5G3P0C626 314 aa3.51□□□□□ -1.85
PTCD3-219ENST00000494323 AKAIN1P0CW23 69 aa3.51□□□□□ -1.85
PTCD3-219ENST00000494323 CXCL3P19876 107 aa3.51□□□□□ -1.85
PTCD3-219ENST00000494323 M6PRP20645 277 aa3.51□□□□□ -1.85
PTCD3-219ENST00000494323 ATP5IP56385 69 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-219ENST00000494323 TAS2R60P59551 318 aa3.51□□□□□ -1.85
PTCD3-219ENST00000494323 PSG3Q16557 428 aa3.51□□□□□ -1.85
PTCD3-219ENST00000494323 SAMD13Q5VXD3 122 aa3.51□□□□□ -1.85
PTCD3-219ENST00000494323 LYPD1Q8N2G4 141 aa3.51□□□□□ -1.85
PTCD3-219ENST00000494323 BPIFCQ8NFQ6 507 aa3.51□□□□□ -1.85
PTCD3-219ENST00000494323 OR8A1Q8NGG7 326 aa3.51□□□□□ -1.85
PTCD3-219ENST00000494323 OR4D5Q8NGN0 318 aa3.51□□□□□ -1.85
PTCD3-219ENST00000494323 LRRC20Q8TCA0 184 aa3.51□□□□□ -1.85
PTCD3-219ENST00000494323 RXFP4Q8TDU9 374 aa3.51□□□□□ -1.85
PTCD3-219ENST00000494323 C15orf40Q8WUR7 153 aa3.51□□□□□ -1.85
PTCD3-219ENST00000494323 AP3S1Q92572 193 aa3.51□□□□□ -1.85
PTCD3-219ENST00000494323 IL22RA2Q969J5 263 aa3.51□□□□□ -1.85
PTCD3-219ENST00000494323 PRRT1Q99946 306 aa3.51□□□□□ -1.85
PTCD3-219ENST00000494323 TMEM147Q9BVK8 224 aa3.51□□□□□ -1.85
PTCD3-219ENST00000494323 PARD6GQ9BYG4 376 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-219ENST00000494323 Q9H3A6 140 aa3.51□□□□□ -1.85
PTCD3-219ENST00000494323 MCUBQ9NWR8 336 aa3.51□□□□□ -1.85
PTCD3-219ENST00000494323 CACFD1Q9UGQ2 172 aa3.51□□□□□ -1.85
PTCD3-219ENST00000494323 SMCO3A2RU48 225 aa3.5□□□□□ -1.85
PTCD3-219ENST00000494323 H3BMQ9 156 aa3.5□□□□□ -1.85
PTCD3-219ENST00000494323 PITX3O75364 302 aa3.5□□□□□ -1.85
PTCD3-219ENST00000494323 CFDP00746 253 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-219ENST00000494323 IL5P05113 134 aa3.5□□□□□ -1.85
PTCD3-219ENST00000494323 CDKN1BP46527 198 aa3.5□□□□□ -1.85
PTCD3-219ENST00000494323 LINC00315P59091 139 aa3.5□□□□□ -1.85
PTCD3-219ENST00000494323 AKR1C1Q04828 323 aa3.5□□□□□ -1.85
PTCD3-219ENST00000494323 SSBP1Q04837 148 aaKnown RBP3.5□□□□□ -1.85
PTCD3-219ENST00000494323 IL18Q14116 193 aa3.5□□□□□ -1.85
PTCD3-219ENST00000494323 TTC32Q5I0X7 151 aa3.5□□□□□ -1.85
PTCD3-219ENST00000494323 SPANXN5Q5MJ07 72 aa3.5□□□□□ -1.85
PTCD3-219ENST00000494323 Q5VSD8 79 aa3.5□□□□□ -1.85
PTCD3-219ENST00000494323 ZNF493Q6ZR52 646 aa3.5□□□□□ -1.85
PTCD3-219ENST00000494323 TMEM256Q8N2U0 113 aa3.5□□□□□ -1.85
PTCD3-219ENST00000494323 SMIM4Q8WVI0 70 aa3.5□□□□□ -1.85
PTCD3-219ENST00000494323 S100ZQ8WXG8 99 aa3.5□□□□□ -1.85
PTCD3-219ENST00000494323 RPUSD4Q96CM3 377 aaKnown RBP3.5□□□□□ -1.85
PTCD3-219ENST00000494323 C16orf74Q96GX8 76 aa3.5□□□□□ -1.85
PTCD3-219ENST00000494323 DIRAS2Q96HU8 199 aa3.5□□□□□ -1.85
PTCD3-219ENST00000494323 GPR82Q96P67 336 aa3.5□□□□□ -1.85
PTCD3-219ENST00000494323 VGLL1Q99990 258 aa3.5□□□□□ -1.85
PTCD3-219ENST00000494323 SCP2D1Q9UJQ7 156 aa3.5□□□□□ -1.85
PTCD3-219ENST00000494323 DNAH5Q8TE73 4624 aa3.5□□□□□ -1.85
PTCD3-219ENST00000494323 A0A096LPF7 62 aa3.49□□□□□ -1.85
PTCD3-219ENST00000494323 H3BP45 60 aa3.49□□□□□ -1.85
PTCD3-219ENST00000494323 H3BRN7 92 aa3.49□□□□□ -1.85
PTCD3-219ENST00000494323 H7BYZ3 331 aa3.49□□□□□ -1.85
PTCD3-219ENST00000494323 SYNGR2O43760 224 aa3.49□□□□□ -1.85
PTCD3-219ENST00000494323 HYPMO75409 117 aa3.49□□□□□ -1.85
PTCD3-219ENST00000494323 RLN2P04090 185 aa3.49□□□□□ -1.85
PTCD3-219ENST00000494323 ANXA3P12429 323 aa3.49□□□□□ -1.85
PTCD3-219ENST00000494323 RPL7P18124 248 aaKnown RBP3.49□□□□□ -1.85
PTCD3-219ENST00000494323 KRTAP10-1P60331 282 aa3.49□□□□□ -1.85
PTCD3-219ENST00000494323 HAMPP81172 84 aa3.49□□□□□ -1.85
PTCD3-219ENST00000494323 CD300CQ08708 224 aa3.49□□□□□ -1.85
PTCD3-219ENST00000494323 PATE2Q6UY27 113 aa3.49□□□□□ -1.85
PTCD3-219ENST00000494323 Q6ZRN7 208 aaPredicted RBP3.49□□□□□ -1.85
PTCD3-219ENST00000494323 CYP2G1PQ6ZSU1 146 aa3.49□□□□□ -1.85
PTCD3-219ENST00000494323 Q6ZTI0 123 aa3.49□□□□□ -1.85
PTCD3-219ENST00000494323 TMED4Q7Z7H5 227 aa3.49□□□□□ -1.85
PTCD3-219ENST00000494323 Q8N377 158 aa3.49□□□□□ -1.85
PTCD3-219ENST00000494323 OR10J6PQ8NGY7 276 aa3.49□□□□□ -1.85
PTCD3-219ENST00000494323 TMEM263Q8WUH6 116 aaKnown RBP3.49□□□□□ -1.85
PTCD3-219ENST00000494323 VSIG2Q96IQ7 327 aa3.49□□□□□ -1.85
PTCD3-219ENST00000494323 SCGB3A2Q96PL1 93 aa3.49□□□□□ -1.85
PTCD3-219ENST00000494323 UPK3BQ9BT76 320 aa3.49□□□□□ -1.85
PTCD3-219ENST00000494323 SHANK2-AS3Q9BTD1 123 aa3.49□□□□□ -1.85
PTCD3-219ENST00000494323 CCDC59Q9P031 241 aaKnown RBP3.49□□□□□ -1.85
PTCD3-219ENST00000494323 HIGD1AQ9Y241 93 aa3.49□□□□□ -1.85
PTCD3-219ENST00000494323 MRPS16Q9Y3D3 137 aaKnown RBP3.49□□□□□ -1.85
PTCD3-219ENST00000494323 TRAV12-3A0A0B4J271 114 aa3.48□□□□□ -1.85
PTCD3-219ENST00000494323 ANKRD20A5PA0PJZ0 165 aa3.48□□□□□ -1.85
PTCD3-219ENST00000494323 RPL37AP8A6NKH3 93 aa3.48□□□□□ -1.85
PTCD3-219ENST00000494323 KRTAP16-1A8MUX0 517 aa3.48□□□□□ -1.85
PTCD3-219ENST00000494323 SIVA1O15304 175 aa3.48□□□□□ -1.85
PTCD3-219ENST00000494323 MED6O75586 246 aa3.48□□□□□ -1.85
PTCD3-219ENST00000494323 ADAP1O75689 374 aa3.48□□□□□ -1.85
PTCD3-219ENST00000494323 CCNKO75909 580 aa3.48□□□□□ -1.85
PTCD3-219ENST00000494323 IFNA5P01569 189 aa3.48□□□□□ -1.85
PTCD3-219ENST00000494323 LINC00869P0C866 280 aa3.48□□□□□ -1.85
PTCD3-219ENST00000494323 DNAH10OSP0CZ25 163 aa3.48□□□□□ -1.85
PTCD3-219ENST00000494323 CT45A10P0DMU9 189 aa3.48□□□□□ -1.85
PTCD3-219ENST00000494323 S100A7P31151 101 aa3.48□□□□□ -1.85
PTCD3-219ENST00000494323 S100A5P33763 92 aa3.48□□□□□ -1.85
PTCD3-219ENST00000494323 RRAS2P62070 204 aaPredicted RBP3.48□□□□□ -1.85
PTCD3-219ENST00000494323 MRPS10P82664 201 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms