RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 FAM181BA6NEQ2 426 aa8.18□□□□□ -1.1
PHACTR4-204ENST00000493669 J3QKU1 62 aa8.18□□□□□ -1.1
PHACTR4-204ENST00000493669 C3orf79P0CE67 100 aa8.18□□□□□ -1.1
PHACTR4-204ENST00000493669 PLA2G2AP14555 144 aa8.18□□□□□ -1.1
PHACTR4-204ENST00000493669 ID1P41134 155 aa8.18□□□□□ -1.1
PHACTR4-204ENST00000493669 Q8N976 141 aa8.18□□□□□ -1.1
PHACTR4-204ENST00000493669 CREBBPQ92793 2442 aa8.18□□□□□ -1.1
PHACTR4-204ENST00000493669 VPS13CQ709C8 3753 aa8.18□□□□□ -1.1
PHACTR4-204ENST00000493669 RPLP1P05386 114 aaKnown RBP8.18□□□□□ -1.1
PHACTR4-204ENST00000493669 CD33P20138 364 aa8.18□□□□□ -1.1
PHACTR4-204ENST00000493669 RNF114Q9Y508 228 aa8.18□□□□□ -1.1
PHACTR4-204ENST00000493669 POLQO75417 2590 aa8.18□□□□□ -1.1
PHACTR4-204ENST00000493669 SVEP1Q4LDE5 3571 aa8.18□□□□□ -1.1
PHACTR4-204ENST00000493669 IGKV3D-20A0A0C4DH25 116 aa8.18□□□□□ -1.1
PHACTR4-204ENST00000493669 RPL11P62913 178 aaKnown RBP8.18□□□□□ -1.1
PHACTR4-204ENST00000493669 TWIST1Q15672 202 aa8.18□□□□□ -1.1
PHACTR4-204ENST00000493669 ORMDL3Q8N138 153 aa8.18□□□□□ -1.1
PHACTR4-204ENST00000493669 FAM19A4Q96LR4 140 aa8.18□□□□□ -1.1
PHACTR4-204ENST00000493669 C20orf144Q9BQM9 153 aa8.18□□□□□ -1.1
PHACTR4-204ENST00000493669 APRG1Q8IVJ8 170 aa8.17□□□□□ -1.1
PHACTR4-204ENST00000493669 OR8A1Q8NGG7 326 aa8.17□□□□□ -1.1
PHACTR4-204ENST00000493669 VAMP8Q9BV40 100 aa8.17□□□□□ -1.1
PHACTR4-204ENST00000493669 IGHV1-24A0A0C4DH33 117 aa8.17□□□□□ -1.1
PHACTR4-204ENST00000493669 PPBPP02775 128 aa8.17□□□□□ -1.1
PHACTR4-204ENST00000493669 PMCHL1Q16048 86 aa8.17□□□□□ -1.1
PHACTR4-204ENST00000493669 NDUFAF3Q9BU61 184 aa8.17□□□□□ -1.1
PHACTR4-204ENST00000493669 TRAV21A0A0B4J279 112 aa8.16□□□□□ -1.1
PHACTR4-204ENST00000493669 BTF3P20290 206 aaKnown RBP8.16□□□□□ -1.1
PHACTR4-204ENST00000493669 PRR31Q5SQ13 230 aa8.16□□□□□ -1.1
PHACTR4-204ENST00000493669 C10orf99Q6UWK7 81 aa8.16□□□□□ -1.1
PHACTR4-204ENST00000493669 AMN1Q8IY45 258 aa8.16□□□□□ -1.1
PHACTR4-204ENST00000493669 ZFAND2AQ8N6M9 145 aa8.16□□□□□ -1.1
PHACTR4-204ENST00000493669 LAMTOR2Q9Y2Q5 125 aa8.16□□□□□ -1.1
PHACTR4-204ENST00000493669 IGHV4-4A0A075B6R2 117 aa8.16□□□□□ -1.1
PHACTR4-204ENST00000493669 D6R8Y8 96 aa8.16□□□□□ -1.1
PHACTR4-204ENST00000493669 SNAI2O43623 268 aa8.16□□□□□ -1.1
PHACTR4-204ENST00000493669 CACNG7P62955 275 aa8.16□□□□□ -1.1
PHACTR4-204ENST00000493669 MRPL51Q4U2R6 128 aaKnown RBP8.16□□□□□ -1.1
PHACTR4-204ENST00000493669 PRELID3AQ96N28 172 aa8.16□□□□□ -1.1
PHACTR4-204ENST00000493669 C11orf21Q9P2W6 132 aa8.16□□□□□ -1.1
PHACTR4-204ENST00000493669 C2orf70A6NJV1 201 aa8.16□□□□□ -1.1
PHACTR4-204ENST00000493669 DCANP1Q8TF63 244 aa8.16□□□□□ -1.1
PHACTR4-204ENST00000493669 AP5S1Q9NUS5 200 aa8.16□□□□□ -1.1
PHACTR4-204ENST00000493669 CRXO43186 299 aaPredicted RBP8.15□□□□□ -1.1
PHACTR4-204ENST00000493669 FA2HQ7L5A8 372 aa8.15□□□□□ -1.1
PHACTR4-204ENST00000493669 CELSR1Q9NYQ6 3014 aa8.15□□□□□ -1.1
PHACTR4-204ENST00000493669 M0QZ24 198 aa8.15□□□□□ -1.11
PHACTR4-204ENST00000493669 LEPROTL1O95214 131 aa8.15□□□□□ -1.11
PHACTR4-204ENST00000493669 MED14OSP0DP75 135 aa8.15□□□□□ -1.11
PHACTR4-204ENST00000493669 EBLN2Q6P2I7 272 aa8.15□□□□□ -1.11
PHACTR4-204ENST00000493669 WFDC11Q8NEX6 87 aa8.15□□□□□ -1.11
PHACTR4-204ENST00000493669 PRSS3P2Q8NHM4 247 aa8.15□□□□□ -1.11
PHACTR4-204ENST00000493669 C14orf144Q96I85 54 aa8.15□□□□□ -1.11
PHACTR4-204ENST00000493669 TMEM70Q9BUB7 260 aa8.15□□□□□ -1.11
PHACTR4-204ENST00000493669 ABCA12Q86UK0 2595 aa8.15□□□□□ -1.11
PHACTR4-204ENST00000493669 ODF3Q96PU9 254 aa8.14□□□□□ -1.11
PHACTR4-204ENST00000493669 HSPB8Q9UJY1 196 aa8.14□□□□□ -1.11
PHACTR4-204ENST00000493669 CKS2P33552 79 aa8.14□□□□□ -1.11
PHACTR4-204ENST00000493669 PRR9Q5T870 116 aa8.14□□□□□ -1.11
PHACTR4-204ENST00000493669 SMIM15Q7Z3B0 74 aa8.14□□□□□ -1.11
PHACTR4-204ENST00000493669 CENPEQ02224 2701 aa8.14□□□□□ -1.11
PHACTR4-204ENST00000493669 IGHV4OR15-8A0A075B7B6 117 aa8.14□□□□□ -1.11
PHACTR4-204ENST00000493669 A0A087WW49 117 aa8.14□□□□□ -1.11
PHACTR4-204ENST00000493669 RNF185Q96GF1 192 aa8.14□□□□□ -1.11
PHACTR4-204ENST00000493669 MUC21A0A0G2JKD1 596 aa8.13□□□□□ -1.11
PHACTR4-204ENST00000493669 MUC21A0A140T8X8 626 aa8.13□□□□□ -1.11
PHACTR4-204ENST00000493669 C20orf202A1L168 122 aa8.13□□□□□ -1.11
PHACTR4-204ENST00000493669 HOXD3P31249 432 aaPredicted RBP8.13□□□□□ -1.11
PHACTR4-204ENST00000493669 MUC21Q5SSG8 566 aa8.13□□□□□ -1.11
PHACTR4-204ENST00000493669 OR10AG1Q8NH19 301 aa8.13□□□□□ -1.11
PHACTR4-204ENST00000493669 FOXC2Q99958 501 aa8.13□□□□□ -1.11
PHACTR4-204ENST00000493669 CSN3P07498 182 aa8.13□□□□□ -1.11
PHACTR4-204ENST00000493669 SNRPD3P62318 126 aaKnown RBP8.13□□□□□ -1.11
PHACTR4-204ENST00000493669 LBHQ53QV2 105 aaPredicted RBP8.13□□□□□ -1.11
PHACTR4-204ENST00000493669 MS4A6AQ9H2W1 248 aa8.13□□□□□ -1.11
PHACTR4-204ENST00000493669 SIGLEC8Q9NYZ4 499 aa8.13□□□□□ -1.11
PHACTR4-204ENST00000493669 MAP1AP78559 2803 aaPredicted RBP8.13□□□□□ -1.11
PHACTR4-204ENST00000493669 SYNJ2BPP57105 145 aa8.12□□□□□ -1.11
PHACTR4-204ENST00000493669 MRPL52Q86TS9 123 aaKnown RBP8.12□□□□□ -1.11
PHACTR4-204ENST00000493669 KLHDC1Q8N7A1 406 aa8.12□□□□□ -1.11
PHACTR4-204ENST00000493669 MSRB1Q9NZV6 116 aa8.12□□□□□ -1.11
PHACTR4-204ENST00000493669 PAM16Q9Y3D7 125 aa8.12□□□□□ -1.11
PHACTR4-204ENST00000493669 IGKV3-7A0A075B6H7 116 aa8.12□□□□□ -1.11
PHACTR4-204ENST00000493669 KLLNB2CW77 178 aa8.12□□□□□ -1.11
PHACTR4-204ENST00000493669 K7EQG2 157 aa8.12□□□□□ -1.11
PHACTR4-204ENST00000493669 TCF21O43680 179 aa8.12□□□□□ -1.11
PHACTR4-204ENST00000493669 EDN2P20800 178 aa8.12□□□□□ -1.11
PHACTR4-204ENST00000493669 TDRG1Q3Y452 100 aa8.12□□□□□ -1.11
PHACTR4-204ENST00000493669 PET117Q6UWS5 81 aa8.12□□□□□ -1.11
PHACTR4-204ENST00000493669 WFDC12Q8WWY7 111 aa8.12□□□□□ -1.11
PHACTR4-204ENST00000493669 MIEN1Q9BRT3 115 aa8.12□□□□□ -1.11
PHACTR4-204ENST00000493669 MAP1LC3CQ9BXW4 147 aa8.12□□□□□ -1.11
PHACTR4-204ENST00000493669 APCP25054 2843 aa8.12□□□□□ -1.11
PHACTR4-204ENST00000493669 SYS1-DBNDD2H3BUS1 97 aa8.11□□□□□ -1.11
PHACTR4-204ENST00000493669 ASIPP42127 132 aa8.11□□□□□ -1.11
PHACTR4-204ENST00000493669 SSTP61278 116 aa8.11□□□□□ -1.11
PHACTR4-204ENST00000493669 C4orf3Q8WVX3 66 aa8.11□□□□□ -1.11
PHACTR4-204ENST00000493669 LINC01546A6NGU7 62 aa8.11□□□□□ -1.11
PHACTR4-204ENST00000493669 F6UB75 175 aa8.11□□□□□ -1.11
PHACTR4-204ENST00000493669 IFI27P40305 119 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms