RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 MIC13Q5XKP0 118 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 AMTNQ6UX39 209 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 PATE2Q6UY27 113 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 LGI3Q8N145 548 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 CCDC71LQ8N9Z2 235 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 DUSP18Q8NEJ0 188 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 BPIFCQ8NFQ6 507 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 OR4X1Q8NH49 305 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 RAB2BQ8WUD1 216 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 PPP1R14BQ96C90 147 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 GALNT14Q96FL9 552 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 LINC00477Q96M19 166 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 METTL26Q96S19 204 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 PDCD10Q9BUL8 212 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 MFFQ9GZY8 342 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 GEMIN7Q9H840 131 aaKnown RBP1.93□□□□□ -2.1
PTCD3-218ENST00000493430 ENY2Q9NPA8 101 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 TMEM56-RWDD3S4R434 201 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 HERC2O95714 4834 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 DNAH11Q96DT5 4516 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 IGKV2-40A0A087WW87 121 aaPredicted RBP1.92□□□□□ -2.1
PTCD3-218ENST00000493430 TRAV25A0A0B4J276 109 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 PLAC8L1A1L4L8 177 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 C9orf170A2RU37 121 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 NUPR2A6NF83 97 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 H3BMM0 161 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 H3BQ15 152 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 H3BRN7 92 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 K7EMT4 169 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 M0R3E3 92 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 HMGB3O15347 200 aaKnown RBP1.92□□□□□ -2.1
PTCD3-218ENST00000493430 GSTZ1O43708 216 aaPredicted RBP1.92□□□□□ -2.1
PTCD3-218ENST00000493430 CST7O76096 145 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 SFT2D2O95562 160 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 IGKV2D-40P01614 121 aaPredicted RBP1.92□□□□□ -2.1
PTCD3-218ENST00000493430 IGHV3-53P01767 116 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 S100A9P06702 114 aaKnown RBP1.92□□□□□ -2.1
PTCD3-218ENST00000493430 OR5G3P0C626 314 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 LINC00869P0C866 280 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 PYYP10082 97 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 NPPCP23582 126 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 BMI1P35226 326 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 CDKN1BP46527 198 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 RPL5P46777 297 aaKnown RBP1.92□□□□□ -2.1
PTCD3-218ENST00000493430 TMBIM6P55061 237 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 DEFA3P59666 94 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 PLP1P60201 277 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 S100A10P60903 97 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 HIST1H1AQ02539 215 aaPredicted RBP1.92□□□□□ -2.1
PTCD3-218ENST00000493430 ERCC8Q13216 396 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 LAGE3Q14657 143 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 THOC7Q6I9Y2 204 aaKnown RBP1.92□□□□□ -2.1
PTCD3-218ENST00000493430 LAMTOR1Q6IAA8 161 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 CEND1Q8N111 149 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 LINC01561Q8N1V8 128 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 TOMM5Q8N4H5 51 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 OR11H7Q8NGC8 314 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 OR1S2Q8NGQ3 325 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 Q8TAT8 98 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 ZFAND1Q8TCF1 268 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 AP3S1Q92572 193 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 MARC2Q969Z3 335 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 SLC35E1Q96K37 410 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 TSC22D3Q99576 134 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 MGST2Q99735 147 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 GINS3Q9BRX5 216 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 RSG1Q9BU20 258 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 SMIM3Q9BZL3 60 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 ARL6Q9H0F7 186 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 C20orf85Q9H1P6 137 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 C11orf1Q9H5F2 150 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 CYTL1Q9NRR1 136 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.92□□□□□ -2.1
PTCD3-218ENST00000493430 NUDT15Q9NV35 164 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 GSKIPQ9P0R6 139 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 RSL24D1Q9UHA3 163 aaKnown RBP1.92□□□□□ -2.1
PTCD3-218ENST00000493430 KLK12Q9UKR0 248 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 TBC1D24Q9ULP9 559 aa1.92□□□□□ -2.1
PTCD3-218ENST00000493430 CSDC2Q9Y534 153 aaKnown RBP1.92□□□□□ -2.1
PTCD3-218ENST00000493430 YTHDF2Q9Y5A9 579 aaKnown RBP1.92□□□□□ -2.1
PTCD3-218ENST00000493430 ABCA13Q86UQ4 5058 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 PKHD1P08F94 4074 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 DNAH5Q8TE73 4624 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 DEFB131BA0A096LNP1 70 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 A0A096LPF7 62 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 A0A0B4J2A0 478 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 A0A0J9YX75 114 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 A0A0J9YY99 117 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 FAM231BA6NCW3 169 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 ZNF98A6NK75 572 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 ZNF705EA8MWA4 302 aaPredicted RBP1.91□□□□□ -2.1
PTCD3-218ENST00000493430 KRTAP4-16G5E9R7 235 aaPredicted RBP1.91□□□□□ -2.1
PTCD3-218ENST00000493430 K7EPK0 472 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 GOSR2O14653 212 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 MRPS12O15235 138 aaKnown RBP1.91□□□□□ -2.1
PTCD3-218ENST00000493430 SYNGR2O43760 224 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 ZNF861PO60384 105 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 NDUFB6O95139 128 aa1.91□□□□□ -2.1
PTCD3-218ENST00000493430 DUSP14O95147 198 aaKnown RBP1.91□□□□□ -2.1
PTCD3-218ENST00000493430 OR4E1P0C645 316 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms