RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 IGF2BP2-AS1Q96M15 143 aa12.53□□□□□ -0.4
LIME1-208ENST00000493265 RCHY1Q96PM5 261 aa12.53□□□□□ -0.4
LIME1-208ENST00000493265 TMEM208Q9BTX3 173 aa12.53□□□□□ -0.4
LIME1-208ENST00000493265 C7orf71A4D174 169 aa12.52□□□□□ -0.41
LIME1-208ENST00000493265 TMEM250H0YL14 139 aa12.52□□□□□ -0.41
LIME1-208ENST00000493265 CRISP2P16562 243 aa12.52□□□□□ -0.41
LIME1-208ENST00000493265 CENPWQ5EE01 88 aa12.52□□□□□ -0.41
LIME1-208ENST00000493265 SAPCD1Q5SSQ6 148 aa12.52□□□□□ -0.41
LIME1-208ENST00000493265 COMMD7Q86VX2 200 aa12.52□□□□□ -0.41
LIME1-208ENST00000493265 BAGE2Q86Y30 109 aa12.52□□□□□ -0.41
LIME1-208ENST00000493265 PARLQ9H300 379 aa12.52□□□□□ -0.41
LIME1-208ENST00000493265 LENEPQ9Y5L5 61 aa12.52□□□□□ -0.41
LIME1-208ENST00000493265 KLLNB2CW77 178 aa12.51□□□□□ -0.41
LIME1-208ENST00000493265 LTAP01374 205 aa12.51□□□□□ -0.41
LIME1-208ENST00000493265 RBMY1A1P0DJD3 496 aaKnown RBP12.51□□□□□ -0.41
LIME1-208ENST00000493265 RBMY1CP0DJD4 496 aa12.51□□□□□ -0.41
LIME1-208ENST00000493265 HTN1P15515 57 aa12.51□□□□□ -0.41
LIME1-208ENST00000493265 GNG4P50150 75 aa12.51□□□□□ -0.41
LIME1-208ENST00000493265 TAS2R60P59551 318 aa12.51□□□□□ -0.41
LIME1-208ENST00000493265 RBMY1FQ15415 496 aaKnown RBP12.51□□□□□ -0.41
LIME1-208ENST00000493265 Q6ZQT7 251 aa12.51□□□□□ -0.41
LIME1-208ENST00000493265 Q6ZWC4 215 aa12.51□□□□□ -0.41
LIME1-208ENST00000493265 ZFP30Q9Y2G7 519 aa12.51□□□□□ -0.41
LIME1-208ENST00000493265 GOLT1BQ9Y3E0 138 aa12.51□□□□□ -0.41
LIME1-208ENST00000493265 U3KQK5 164 aa12.51□□□□□ -0.41
LIME1-208ENST00000493265 TRBV7-9A0A0J9YWB2 115 aa12.5□□□□□ -0.41
LIME1-208ENST00000493265 TRBV6-1A0A0K0K1D8 114 aa12.5□□□□□ -0.41
LIME1-208ENST00000493265 PGPEP1LA6NFU8 196 aa12.5□□□□□ -0.41
LIME1-208ENST00000493265 SPRY2O43597 315 aa12.5□□□□□ -0.41
LIME1-208ENST00000493265 GCGP01275 180 aa12.5□□□□□ -0.41
LIME1-208ENST00000493265 NHLRC4P0CG21 123 aaPredicted RBP12.5□□□□□ -0.41
LIME1-208ENST00000493265 SMUG1Q53HV7 270 aa12.5□□□□□ -0.41
LIME1-208ENST00000493265 C1orf158Q8N1D5 194 aa12.5□□□□□ -0.41
LIME1-208ENST00000493265 CSNK1G2-AS1Q8NCQ2 148 aa12.5□□□□□ -0.41
LIME1-208ENST00000493265 RNF183Q96D59 192 aa12.5□□□□□ -0.41
LIME1-208ENST00000493265 LINC01587Q99440 93 aa12.5□□□□□ -0.41
LIME1-208ENST00000493265 NIPSNAP3BQ9BS92 247 aa12.5□□□□□ -0.41
LIME1-208ENST00000493265 MGST1P10620 155 aaKnown RBP12.49□□□□□ -0.41
LIME1-208ENST00000493265 ZNF80P51504 273 aaPredicted RBP12.49□□□□□ -0.41
LIME1-208ENST00000493265 ZC2HC1AQ96GY0 325 aa12.49□□□□□ -0.41
LIME1-208ENST00000493265 SMIM7Q9BQ49 75 aa12.49□□□□□ -0.41
LIME1-208ENST00000493265 SPATA25Q9BR10 227 aa12.49□□□□□ -0.41
LIME1-208ENST00000493265 NAGKQ9UJ70 344 aa12.49□□□□□ -0.41
LIME1-208ENST00000493265 TRBV20OR9-2A0A075B6H5 130 aa12.48□□□□□ -0.41
LIME1-208ENST00000493265 LINC00862A6NCI5 91 aa12.48□□□□□ -0.41
LIME1-208ENST00000493265 ZNF727A8MUV8 499 aa12.48□□□□□ -0.41
LIME1-208ENST00000493265 PRM2P04554 102 aa12.48□□□□□ -0.41
LIME1-208ENST00000493265 PRR27Q6MZM9 219 aa12.48□□□□□ -0.41
LIME1-208ENST00000493265 TMEM183AQ8IXX5 376 aa12.48□□□□□ -0.41
LIME1-208ENST00000493265 OR11H2Q8NH07 326 aa12.48□□□□□ -0.41
LIME1-208ENST00000493265 OVOL2Q9BRP0 275 aa12.48□□□□□ -0.41
LIME1-208ENST00000493265 SMDT1Q9H4I9 107 aa12.48□□□□□ -0.41
LIME1-208ENST00000493265 ZMAT4Q9H898 229 aa12.48□□□□□ -0.41
LIME1-208ENST00000493265 ZNF705GA8MUZ8 300 aaPredicted RBP12.47□□□□□ -0.41
LIME1-208ENST00000493265 MUC21Q5SSG8 566 aa12.47□□□□□ -0.41
LIME1-208ENST00000493265 TM2D3Q9BRN9 247 aa12.47□□□□□ -0.41
LIME1-208ENST00000493265 DYNC2H1Q8NCM8 4307 aaKnown RBP12.46□□□□□ -0.41
LIME1-208ENST00000493265 RYR2Q92736 4967 aa12.46□□□□□ -0.41
LIME1-208ENST00000493265 NDUFS6O75380 124 aaKnown RBP12.46□□□□□ -0.41
LIME1-208ENST00000493265 ZNF324O75467 553 aaPredicted RBP12.46□□□□□ -0.41
LIME1-208ENST00000493265 SFTA3P0C7M3 94 aa12.46□□□□□ -0.41
LIME1-208ENST00000493265 SOHLH1Q5JUK2 328 aa12.46□□□□□ -0.41
LIME1-208ENST00000493265 STAB2Q8WWQ8 2551 aa12.45□□□□□ -0.42
LIME1-208ENST00000493265 TRAV21A0A0B4J279 112 aa12.45□□□□□ -0.42
LIME1-208ENST00000493265 H7BYZ3 331 aa12.45□□□□□ -0.42
LIME1-208ENST00000493265 IGLV2-8P01709 118 aa12.45□□□□□ -0.42
LIME1-208ENST00000493265 Q6AWC8 147 aa12.45□□□□□ -0.42
LIME1-208ENST00000493265 ZNF705AQ6ZN79 300 aaPredicted RBP12.45□□□□□ -0.42
LIME1-208ENST00000493265 TMEM256Q8N2U0 113 aa12.45□□□□□ -0.42
LIME1-208ENST00000493265 C20orf144Q9BQM9 153 aa12.45□□□□□ -0.42
LIME1-208ENST00000493265 MLST8Q9BVC4 326 aa12.45□□□□□ -0.42
LIME1-208ENST00000493265 TP53TG1Q9Y2A0 90 aa12.45□□□□□ -0.42
LIME1-208ENST00000493265 C9JCJ5 164 aa12.44□□□□□ -0.42
LIME1-208ENST00000493265 SH2D1AO60880 128 aa12.44□□□□□ -0.42
LIME1-208ENST00000493265 PFN1P07737 140 aaKnown RBP12.44□□□□□ -0.42
LIME1-208ENST00000493265 CRIP1P50238 77 aa12.44□□□□□ -0.42
LIME1-208ENST00000493265 FAM162BQ5T6X4 162 aa12.44□□□□□ -0.42
LIME1-208ENST00000493265 OCC1Q8TAD7 63 aa12.44□□□□□ -0.42
LIME1-208ENST00000493265 X6R8D5 127 aa12.44□□□□□ -0.42
LIME1-208ENST00000493265 FABP5P3A8MUU1 101 aa12.43□□□□□ -0.42
LIME1-208ENST00000493265 DEFB4AO15263 64 aa12.43□□□□□ -0.42
LIME1-208ENST00000493265 OR5I1Q13606 314 aa12.43□□□□□ -0.42
LIME1-208ENST00000493265 UQCC3Q6UW78 93 aa12.43□□□□□ -0.42
LIME1-208ENST00000493265 FAM159AQ6UWV7 190 aa12.43□□□□□ -0.42
LIME1-208ENST00000493265 HUWE1Q7Z6Z7 4374 aaKnown RBP12.43□□□□□ -0.42
LIME1-208ENST00000493265 IGHV1OR15-1A0A075B7D0 117 aa12.42□□□□□ -0.42
LIME1-208ENST00000493265 CBY3A6NI87 242 aa12.42□□□□□ -0.42
LIME1-208ENST00000493265 C3orf84H3BNL1 204 aa12.42□□□□□ -0.42
LIME1-208ENST00000493265 M0R036 132 aa12.42□□□□□ -0.42
LIME1-208ENST00000493265 ORM1P02763 201 aa12.42□□□□□ -0.42
LIME1-208ENST00000493265 AZU1P20160 251 aa12.42□□□□□ -0.42
LIME1-208ENST00000493265 EMP1P54849 157 aa12.42□□□□□ -0.42
LIME1-208ENST00000493265 TMEM241Q24JQ0 296 aa12.42□□□□□ -0.42
LIME1-208ENST00000493265 RRN3P1Q2M238 152 aa12.42□□□□□ -0.42
LIME1-208ENST00000493265 ANXA2RQ3ZCQ2 193 aa12.42□□□□□ -0.42
LIME1-208ENST00000493265 FAM74A3Q4VXF1 159 aa12.42□□□□□ -0.42
LIME1-208ENST00000493265 PYGO2Q9BRQ0 406 aa12.42□□□□□ -0.42
LIME1-208ENST00000493265 C11orf21Q9P2W6 132 aa12.42□□□□□ -0.42
LIME1-208ENST00000493265 TP53TG3Q9ULZ0 132 aa12.42□□□□□ -0.42
LIME1-208ENST00000493265 TMSB15BA0A087X1C1 80 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms